BAC Information

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BAC

Clone NameB6Ng01-035P13
Chromosome7 (Build37)
Map Location 50,075,757 - 50,075,955
singlet/doubletsinglet
Overlap geneLOC100039706
Upstream geneEG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964
Downstream geneEG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P13.bB6Ng01-035P13.g
ACCDH864296DH864297
length8001,179
definitionDH864296|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P13, 5' end.DH864297|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatattggagagaaaccctatgaatttattcagtatggtgacgac
tttgtacatcaaagagtctccaaatgcataaaataatacatactgaagag
aaacgctacaagtgcaatcactatgaaaaagtttattcaaagaaagtatt
ctccaaatacaaaaagaacaaaaattggagagaaactttatgatgtaaag
attgttaaaaagcctttacacggcacagttatgtaaaaatgcattctaaa
tacaaatattggagagaaatcttacaaatgtaataaatgtaaaaaaggct
ttgcatatcatagtataaaagaggtacaatggaaatgaggaaaacactat
gtaggagtgagttacaatgaaaaacacatataagaaacgcaaattgtaga
acaatgtatatacagaagttaaaataaaaaacatggaaaatgagaaacat
tgtgtatgagtgagttacattgaaaatcataaaaaatgagaaacacacat
tgtagaacatcttatatacaggagttaatataaaaaacatggaaaatgag
aaaaaccacactgtacaacattgtgtaagaatgagtaacaataaaaaaca
tatatatgagaaaaagaacgttgtagaacatggtatgtaaaggagttaca
actaaaaacatggaaaatgagaattgcacgttttagaacatcttatatac
aagaattacaatgaaaaatatggaaaataaggaaaaccacttttgtagaa
cattgtgtatgagtgagttacaatgaaaacataaaaatgagaaacgcaaa

gaattcagttccccaataaaaagacatagactgacagacttgctacaaaa
acaggacccaatagtctgctgtttacaggaaacccatatcagggaaaaag
acagacactatctcagagtgaaaggctggaaaataattttccaagcaaat
ggtctgaagaaatcagctggagtaaccattcaaatatcgattaaaattga
tttccaaactaaagttatcaaaaaagacaaagaaggacacttcatactca
tcaaaggtaaaatcctccaagaggaactctcaattctgaatatctatgct
ccaaatgcaagggcagtcccattcattaaagaaagctcaaagcacacatt
gcagctcacacaataatagtgggaggcttcaacaaaccacttttatcaat
ggacaaatcttggaaacagaaactaaacagggacacagtgaaactaacag
aagttattaaacaaatggacttcatagatatctacagaacgttttatctt
gaaacaaaaggatataacttctttctcagcacatcatggtaccttttcca
aatttgaccatataatttggtcataaaaacaggcctcaactgataaaaaa
tattgcaatttgtccaaagcatgctatcagaccaccaaggactaggctga
ttgatctttcaataaccaacataaataatggaaagccaacattcacgttg
aaaatgaacaaaaattctttttcagtgctaaccttggtcaaggaagggaa
taaagaaagaaattaaagaacattttagaagttttaatgaaaaataaagc
caccaatataccctaaacttatgaaactcatgaaatcattactaagaagg
gaaacatttagatttgagtgccttccaaaagaaacccaaaaaaagccctt
acaagcagcttgaaaaacaccaaaaaatctcccagaataaagggagcaaa
ttccttcaaaaggatcaatgggaaaggaaaaaatcaaatctctgggggaa
aatatcaaatggaaacaagagaaactctttaaatataccacccaagaggg
atgtttcttttgagagtaagtgtagataaccttagatatagcttctttag
gctagagaccacatttattaacaattcgaattgaaagggagatcataaac
cgactcgtgagaaaacaacacgactgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50075757_50075955
seq2: B6Ng01-035P13.b_55_334 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  ACATTTATTACATTTGTAAGATTTCTCTCCAATATTTGTATTTAGAATGC  50

seq1  -----------------------------------ACATTTATTACATTT  15
                                         ||| |  ||||| | 
seq2  ATTTTTACATAACTGTGCCGTGTAAAGGCTTTTTAACAATCTTTACA-TC  99

seq1  GTAGGGTTTCTCTCCAGTATCTCTTCTTTTATTTCTTTGGAGAGTACTTT  65
       ||  ||||||||||| | | | ||||||| | | |||||||| ||||||
seq2  ATAAAGTTTCTCTCCAATTTTTGTTCTTTT-TGTATTTGGAGAATACTTT  148

seq1  GATATGCAAGCACTTTACTATGTTGAAAG-ACTTCAGAGTGTCTGTCTCC  114
        | || |   |||||   ||  |||  | ||||   || || | ||| |
seq2  -CTTTGAATAAACTTTTTCATAGTGATTGCACTT-GTAGCGTTTCTCTTC  196

seq1  AGTTTGGTTTCTTTCAAGCTTTTGAAGATGACTGTGATATTTGAAGGCTT  164
      ||| ||  || ||| | || |||| |||   || |||| |   ||| | |
seq2  AGTATGTATTATTTTATGCATTTGGAGA-CTCTTTGATGTACAAAGTCGT  245

seq1  TATTCCAT--TGTATATATTCATAGGGTTTCTCTCCA  199
       |  ||||  || ||| ||||||||||||||||||||
seq2  CA--CCATACTGAATAAATTCATAGGGTTTCTCTCCA  280