BAC Information

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BAC

Clone NameB6Ng01-036B06
Chromosome7 (Build37)
Map Location 82,887,793 - 83,056,077
singlet/doubletdoublet
Overlap geneAkap13, Klhl25, LOC100042210
Upstream gene0610006L08Rik, Sv2b, 1500012K07Rik, LOC100042171
Downstream geneLOC434200, EG244071
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B06.bB6Ng01-036B06.g
ACCDH864369DH864370
length1,061889
definitionDH864369|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B06, 5' end.DH864370|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,054,999 - 83,056,077)(82,887,793 - 82,888,697)
sequence
gaattcttgtattgactccatcctcttcttctctttcctctaagagggct
aaaatctaaaattaaataatgtctcaatgtctcatataagtatatagact
agaatcatcaaaaaaaaaaaaaaaaaaaaaaacaagcagcacaaattcta
aatctagatgacctggcccaaccactgctaccaagcctatgacatgagca
cactgctctggttccatcctgggactcagggctccattaggacccacaca
gaaggtctgcccacaagctcccttgccactgagaaactggatccccagtg
ggtgccttcactcccctggccgccccatgcacggcaccccagaattctcg
tgcgcatgagaagtacttcctgcctagctctagaaacccaagcagcagct
tcagggtagggagcagcagagaaaagtgtggtcgtttgatgacatgctga
cagcaccatattccggaaacgcatcttatacagagagcgtgagatgccca
cttccaagagagggacaccatgaatgtctatacatccagcaatggagagg
gctggatgtgtgggcagatggaatgactcccagcattgcctccacaggac
actgtcagttcaagcagctcccacacacacccctgcctgagctactacaa
tgactttcactcaagagcaaatgcagaccgcagcctactcggctcccagc
ctgcttcagagccacttccttgctacgtgcatcaaagatctcagtccgag
agccaccaggcattaggagcagtgctttctctgctctcccttccgtacac
agtagaatgtttacttgattctctgtctctttgacagcgctacgtcaaca
gtccctgtgcagacatcagcttctgaacactcaaacccatacacacacac
acacacacacacacacacacacacacacacacacacacagccagagacag
gccattctctcccataaatttgtaagcttgtacatagaccgttcagtcag
caagtgtgggttagcagggcatctatggcaagtaatgattttgcgccgta
aacttagacct
gaattcctgtcagaattatgttcatctgggaccataagcttcttgttgtt
gttcctcagctaagctaaccctagccgaaggccttgagcatccctaatct
gaaaagctgaagtccaaactgcttcagagttcaaaacttgctgacatgtc
acagttgggaactctgcacttgaaaagttgcagtaaggacacagcatgct
caaaatactgtataccgccatctctgggctctatgtattaaagtttgtat
gagtcaggcagtaactttcaaagtcccatcttctacgtgttcagaaaatc
tttacactccgactcttctggccgcaagcatcaaagaagagttgctaagc
tgtgcttgctgctttgttttggatttaattttctagcttctccattagtg
aagctgtgaataatggcctagtaccactgagtggcatcctggtccttttt
tattttcaatattaataggattcggaactataaatacgcctaaaccatat
tgttttcctggctcacttcacctacaactctaaacgtatctgtttggttt
ttgtttaggaggtgagaaagaagagggtgatgacggccaagatctcatga
gaacagagtcagacagcgcctgaaaaaggtaatgctcttcctagaagaag
cactcgggcttgtgagcctgtgggcacttcctttcttgggcattgccttt
tgaaatagttcccttgctctgcctagaatactggcttggcaagtcataat
gaagtctgttttctgaagccataatggtggcactttgagcccctgtcttt
ttacagattcgtccacttgtcaggacagttcactaaatggccggtcagtg
acccaaactcttgattcatcctatggcttttttagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_83054999_83056077
seq2: B6Ng01-036B06.b_43_1103 (reverse)

seq1  AGGTCTTAAGGTTTACGGGCGGCAAAATCATTACTATGCCACTAGATGGC  50
      ||||||  | ||||||||   |||||||||||||| ||||| ||||| ||
seq2  AGGTCT--AAGTTTACGG--CGCAAAATCATTACT-TGCCA-TAGAT-GC  43

seq1  ACTGCTAACCCACACTTGCTTGACTGAACGGGTTTCTATGGTAACAAGCT  100
       |||||||||||||||||| |||||||||||   ||||||   |||||||
seq2  CCTGCTAACCCACACTTGC-TGACTGAACGG---TCTATG--TACAAGCT  87

seq1  TACAAATTTATGGGAGAGAATTGGCCTTGTCCTCTGGCCTGTGTGTGTGT  150
      |||||||||||||||||||| ||||| ||| |||||| ||||||||||||
seq2  TACAAATTTATGGGAGAGAA-TGGCC-TGT-CTCTGG-CTGTGTGTGTGT  133

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGGTTTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGGTTTGAGT  183

seq1  GTTCAGAAGCCTGATGTCTGCACAGGGACTGTTGACGTAGCGCTGTCAAA  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAG-CTGATGTCTGCACAGGGACTGTTGACGTAGCGCTGTCAAA  232

seq1  GAGACAGAGAATCAAGTAAACATTCTACTGTGTACGGAAGGGAGAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAATCAAGTAAACATTCTACTGTGTACGGAAGGGAGAGCAGA  282

seq1  GAAAGCACTGCTCCTAATGCCTGGTGGCTCTCGGACTGAGATCTTTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACTGCTCCTAATGCCTGGTGGCTCTCGGACTGAGATCTTTGATG  332

seq1  CACGTAGCAAGGAAGTGGCTCTGAAGCAGGCTGGGAGCCGAGTAGGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTAGCAAGGAAGTGGCTCTGAAGCAGGCTGGGAGCCGAGTAGGCTGC  382

seq1  GGTCTGCATTTGCTCTTGAGTGAAAGTCATTGTAGTAGCTCAGGCAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCATTTGCTCTTGAGTGAAAGTCATTGTAGTAGCTCAGGCAGGGG  432

seq1  TGTGTGTGGGAGCTGCTTGAACTGACAGTGTCCTGTGGAGGCAATGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGGGAGCTGCTTGAACTGACAGTGTCCTGTGGAGGCAATGCTGG  482

seq1  GAGTCATTCCATCTGCCCACACATCCAGCCCTCTCCATTGCTGGATGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTCCATCTGCCCACACATCCAGCCCTCTCCATTGCTGGATGTAT  532

seq1  AGACATTCATGGTGTCCCTCTCTTGGAAGTGGGCATCTCACGCTCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTCATGGTGTCCCTCTCTTGGAAGTGGGCATCTCACGCTCTCTGT  582

seq1  ATAAGATGCGTTTCCGGAATATGGTGCTGTCAGCATGTCATCAAACGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGCGTTTCCGGAATATGGTGCTGTCAGCATGTCATCAAACGACC  632

seq1  ACACTTTTCTCTGCTGCTCCCTACCCTGAAGCTGCTGCTTGGGTTTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTCTCTGCTGCTCCCTACCCTGAAGCTGCTGCTTGGGTTTCTAG  682

seq1  AGCTAGGCAGGAAGTACTTCTCATGCGCACGAGAATTCTGGGGTGCCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGCAGGAAGTACTTCTCATGCGCACGAGAATTCTGGGGTGCCGTG  732

seq1  CATGGGGCGGCCAGGGGAGTGAAGGCACCCACTGGGGATCCAGTTTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGCGGCCAGGGGAGTGAAGGCACCCACTGGGGATCCAGTTTCTCA  782

seq1  GTGGCAAGGGAGCTTGTGGGCAGACCTTCTGTGTGGGTCCTAATGGAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAGGGAGCTTGTGGGCAGACCTTCTGTGTGGGTCCTAATGGAGCC  832

seq1  CTGAGTCCCAGGATGGAACCAGAGCAGTGTGCTCATGTCATAGGCTTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCCAGGATGGAACCAGAGCAGTGTGCTCATGTCATAGGCTTGGT  882

seq1  AGCAGTGGTTGGGCCAGGTCATCTAGATTTAGAATTTGTGCTGCTTGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGTTGGGCCAGGTCATCTAGATTTAGAATTTGTGCTGCTTGTTT  932

seq1  TTTTTTTTTTTTTTTTTTTTGATGATTCTAGTCTATATACTTATATGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTGATGATTCTAGTCTATATACTTATATGAGA  982

seq1  CATTGAGACATTATTTAATTTTAGATTTTAGCCCTCTTAGAGGAAAGAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGACATTATTTAATTTTAGATTTTAGCCCTCTTAGAGGAAAGAGA  1032

seq1  AGAAGAGGATGGAGTCAATACAAGAATTC  1079
      |||||||||||||||||||||||||||||
seq2  AGAAGAGGATGGAGTCAATACAAGAATTC  1061

seq1: chr7_82887793_82888697
seq2: B6Ng01-036B06.g_69_957

seq1  GAATTCCTGTCAGAATTATGTTCATCTGGGACCATAAGCTTCTTGTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCAGAATTATGTTCATCTGGGACCATAAGCTTCTTGTTGTT  50

seq1  GTTCCTCAGCTAAGCTAACCCTAGCCGAAGGCCTTGAGCATCCCTAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCAGCTAAGCTAACCCTAGCCGAAGGCCTTGAGCATCCCTAATCT  100

seq1  GAAAAGCTGAAGTCCAAACTGCTTCAGAGTTCAAAACTTGCTGACATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTGAAGTCCAAACTGCTTCAGAGTTCAAAACTTGCTGACATGTC  150

seq1  ACAGTTGGGAACTCTGCACTTGAAAAGTTGCAGTAAGGACACAGCATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGGGAACTCTGCACTTGAAAAGTTGCAGTAAGGACACAGCATGCT  200

seq1  CAAAATACTGTATACCGCCATCTCTGGGCTCTATGTATTAAAGTTTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACTGTATACCGCCATCTCTGGGCTCTATGTATTAAAGTTTGTAT  250

seq1  GAGTCAGGCAGTAACTTTCAAAGTCCCATCTTCTACGTGTTCAGAAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGCAGTAACTTTCAAAGTCCCATCTTCTACGTGTTCAGAAAATC  300

seq1  TTTACACTCCGACTCTTCTGGCCGCAAGCATCAAAGAAGAGTTGCTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACTCCGACTCTTCTGGCCGCAAGCATCAAAGAAGAGTTGCTAAGC  350

seq1  TGTGCTTGCTGCTTTGTTTTGGATTTAATTTTCTAGCTTCTCCATTAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGCTGCTTTGTTTTGGATTTAATTTTCTAGCTTCTCCATTAGTG  400

seq1  AAGCTGTGAATAATGGCCTAGTACCACTGAGTGGCATCCTGGTCCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGAATAATGGCCTAGTACCACTGAGTGGCATCCTGGTCCTTTTT  450

seq1  TATTTTCAATATTAATAGGATTCGGAACTATAAATACGCCTAAACCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAATATTAATAGGATTCGGAACTATAAATACGCCTAAACCATAT  500

seq1  TGTTTTCCTGGCTCACTTCACCTACAACTCTAAACGTATCTGTTTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTTTTCCTGGCTCACTTCACCTACAACTCTAAACGTATCTGTTTGG-TT  549

seq1  TTTGTTTAGGAGGTGAGAAAGAAGAGGGTGATGACGGCCAAGATCTCAGG  600
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTGTTTAGGAGGTGAGAAAGAAGAGGGTGATGACGGCCAAGATCTCATG  599

seq1  AGAACAGAGTCAGACAGCGGCCTGAAAAAGGT-ATGCTC-TCCTAG-AGA  647
      |||||||||||||||||| ||||||||||||| |||||| |||||| |||
seq2  AGAACAGAGTCAGACAGC-GCCTGAAAAAGGTAATGCTCTTCCTAGAAGA  648

seq1  AGCACTCGGGCCTGTGAGCCTGTGGGCACCTCCTTTC-TGGGCATTGCCT  696
      ||||||||||| ||||||||||||||||| ||||||| ||||||||||||
seq2  AGCACTCGGGCTTGTGAGCCTGTGGGCACTTCCTTTCTTGGGCATTGCCT  698

seq1  TTTGAAATAGTTCCCCTTGCTCTGCCTCAGATACTGGCTT-GCCAGTCAT  745
      |||||||||||| ||||||||||||||   |||||||||| || ||||||
seq2  TTTGAAATAGTT-CCCTTGCTCTGCCTAGAATACTGGCTTGGCAAGTCAT  747

seq1  AATGAAGTTCTGTTTTCTAGAAGGCGCATATTGGTGGCACTTTGAGCCCC  795
      ||||||| |||||||||| ||||   |||| ||||||||||||||| |||
seq2  AATGAAG-TCTGTTTTCT-GAAG--CCATAATGGTGGCACTTTGAG-CCC  792

seq1  CTGTCCTTTTTACAGATTCGATTCCACTTTGTCAGGACCAGTTTCACTAA  845
      |||| |||||||||||||||  ||||| ||||||||| ||| ||||||||
seq2  CTGT-CTTTTTACAGATTCG--TCCAC-TTGTCAGGA-CAG-TTCACTAA  836

seq1  ATGGCCTGGTCAGTGACCCCAAACTCTTTTGATCCTATCCTAATGGCTTT  895
      |||||| ||||||||| |||||||||  ||||| | ||||| ||||||||
seq2  ATGGCC-GGTCAGTGA-CCCAAACTC--TTGATTC-ATCCT-ATGGCTTT  880

seq1  TTTAGTAAAA  905
      ||||| ||| 
seq2  TTTAGAAAA-  889