BAC Information

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BAC

Clone NameB6Ng01-036C04
Chromosome7 (Build37)
Map Location 137,471,553 - 137,532,535
singlet/doubletdoublet
Overlap geneLOC546005
Upstream genePpapdc1a, Brwd2, LOC100043150, Fgfr2
Downstream geneAte1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036C04.bB6Ng01-036C04.g
ACCDH864407DH864408
length830919
definitionDH864407|Mus musculus domesticus DNA, BAC clone: B6Ng01-036C04, 5' end.DH864408|Mus musculus domesticus DNA, BAC clone: B6Ng01-036C04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,532,006 - 137,532,535)(137,471,553 - 137,472,479)
sequence
gaattctttcagaaatcaaaaagtctgtaagtggtgtttacagaaaggaa
tgaatagccatgctactattattaagttcaactttgtgtttagtacattg
gctatcttgattgagatttaacctgagtgaatttgcactttctgtctggt
cagtgcctatattatctttgctcccatttagaaactattgtccgttgact
atttcagtgaagccaagagctaaagttgccaatatactgcctcccaaatt
acgaggtttaaaaacttttttttaatttttggtgaatttcacttatcacc
cagtctcattcatttcccaggctttccatatccgccctccacccttgtaa
tcccttcccccactcatcccaccatggaagctcttgttacatggtgtgtc
ccacagataccaaaggcatatattttttcacatcctgctttaatagaggt
tcaacctctcctctagtccaccacctaccagtggtaatgaaaagaaagtt
tattaggatatggggggaagtggacctgtttagaaatagttcttttgggg
gagatttcctcggtccattccactagcaaacaccaaacatgaatcagcag
ctctagtccagtctgttcagcaaccaccacgcacgaatcagcagctgcag
acctcagcagacaccacacaggactgcaggggcagttcagtcctgaagaa
acggcaaggctcgccaactgtcccgagtccactgtagaagccgcaagatg
ccacaggaaccacacgagaagttctttggtgagtttctttggtgaagttc
agcagttcggtgtaagggaaccattgcatg
gaattcctgggctcatcctctccccagcccaacccagaaacactgtgaca
aatcaggctaaaccccctaaggtcttgctgtgaatgtaatccacatgcaa
ggtctgggctgcagctgcccgagagaactgcctagtagcacttgagggct
agggatttaatgaccagtgtcctcctgttccatcagtttgtggcccctcc
tgccataggactgagaagagaattaagtcctgagccaagacattgagtgc
agagatcacaccgtagcctggccacaggaaagaggactttccccttcttc
tctgagcctgtgggaggtgacggccccgcatattcacagcataaagcagg
atggcagtctcctgcccccagagttccatttccatgtgcactacaggacc
tggatctccaaaagctgcctggtggaggggagaaggaaggggatgagaaa
agacgagggttctggctcattctcccatgctgctccttggctgcctgtcc
tcagacctggctgagcccatcctgccctgtgctattgcccccgaatttcc
acccaggatatctctatctctccctccttgatgttgagggatctggatga
gacagggatgtggaagggccactggggaactgggatggcagcccggctgg
gtgcttagagagacaagagtgctgactttatgaaaaagtagtacacaggg
cttttgaagcagacagcgtggaattgtcccagctttggagcagaaagagc
ccctattgtaagaaaatcatgtggggttcagcctctggcaatcgtggctg
tggcccgaggatgtccatatgctccctcaggaatcagtcattggcacatc
ccctataaagggcaacagactgggtgcatatgcatccgtgctctctggct
tccaacatggcatttcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137532006_137532535
seq2: B6Ng01-036C04.b_45_574 (reverse)

seq1  AACAGGTCCACTTCCCCCCATATCCTAATAAACTTTCTTTTCATTACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTCCACTTCCCCCCATATCCTAATAAACTTTCTTTTCATTACCAC  50

seq1  TGGTAGGTGGTGGACTAGAGGAGAGGTTGAACCTCTATTAAAGCAGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGTGGTGGACTAGAGGAGAGGTTGAACCTCTATTAAAGCAGGATG  100

seq1  TGAAAAAATATATGCCTTTGGTATCTGTGGGACACACCATGTAACAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAATATATGCCTTTGGTATCTGTGGGACACACCATGTAACAAGAG  150

seq1  CTTCCATGGTGGGATGAGTGGGGGAAGGGATTACAAGGGTGGAGGGCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGGTGGGATGAGTGGGGGAAGGGATTACAAGGGTGGAGGGCGGA  200

seq1  TATGGAAAGCCTGGGAAATGAATGAGACTGGGTGATAAGTGAAATTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAGCCTGGGAAATGAATGAGACTGGGTGATAAGTGAAATTCACC  250

seq1  AAAAATTAAAAAAAAGTTTTTAAACCTCGTAATTTGGGAGGCAGTATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAAAAAAAGTTTTTAAACCTCGTAATTTGGGAGGCAGTATATT  300

seq1  GGCAACTTTAGCTCTTGGCTTCACTGAAATAGTCAACGGACAATAGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTTTAGCTCTTGGCTTCACTGAAATAGTCAACGGACAATAGTTTC  350

seq1  TAAATGGGAGCAAAGATAATATAGGCACTGACCAGACAGAAAGTGCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGGAGCAAAGATAATATAGGCACTGACCAGACAGAAAGTGCAAAT  400

seq1  TCACTCAGGTTAAATCTCAATCAAGATAGCCAATGTACTAAACACAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGGTTAAATCTCAATCAAGATAGCCAATGTACTAAACACAAAGT  450

seq1  TGAACTTAATAATAGTAGCATGGCTATTCATTCCTTTCTGTAAACACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTAATAATAGTAGCATGGCTATTCATTCCTTTCTGTAAACACCAC  500

seq1  TTACAGACTTTTTGATTTCTGAAAGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  TTACAGACTTTTTGATTTCTGAAAGAATTC  530

seq1: chr7_137471553_137472479
seq2: B6Ng01-036C04.g_65_983

seq1  GAATTCCTGGGCTCATCCTCTCCCCAGCCCAACCCAGAAACACTGTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGCTCATCCTCTCCCCAGCCCAACCCAGAAACACTGTGACA  50

seq1  AATCAGGCTAAACCCCCTAAGGTCTTGCTGTGAATGTAATCCACATGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCTAAACCCCCTAAGGTCTTGCTGTGAATGTAATCCACATGCAA  100

seq1  GGTCTGGGCTGCAGCTGCCCGAGAGAACTGCCTAGTAGCACTTGAGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGGCTGCAGCTGCCCGAGAGAACTGCCTAGTAGCACTTGAGGGCT  150

seq1  AGGGATTTAATGACCAGTGTCCTCCTGTTCCATCAGTTTGTGGCCCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTAATGACCAGTGTCCTCCTGTTCCATCAGTTTGTGGCCCCTCC  200

seq1  TGCCATAGGACTGAGAAGAGAATTAAGTCCTGAGCCAAGACATTGAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATAGGACTGAGAAGAGAATTAAGTCCTGAGCCAAGACATTGAGTGC  250

seq1  AGAGATCACACCGTAGCCTGGCCACAGGAAAGAGGACTTTCCCCTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCACACCGTAGCCTGGCCACAGGAAAGAGGACTTTCCCCTTCTTC  300

seq1  TCTGAGCCTGTGGGAGGTGACGGCCCCGCATATTCACAGCATAAAGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCTGTGGGAGGTGACGGCCCCGCATATTCACAGCATAAAGCAGG  350

seq1  ATGGCAGTCTCCTGCCCCCAGAGTTCCATTTCCATGTGCACTACAGGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGTCTCCTGCCCCCAGAGTTCCATTTCCATGTGCACTACAGGACC  400

seq1  TGGATCTCCAAAAGCTGCCTGGTGGAGGGGAGAAGGAAGGGGATGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTCCAAAAGCTGCCTGGTGGAGGGGAGAAGGAAGGGGATGAGAAA  450

seq1  AGACGAGGGTTCTGGCTCATTCTCCCATGCTGCTCCTTGGCTGCCTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGAGGGTTCTGGCTCATTCTCCCATGCTGCTCCTTGGCTGCCTGTCC  500

seq1  TCAGACCTGGCTGAGCCCATCCTGCCCTGTGCTATTGCCCCCGAATTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCTGGCTGAGCCCATCCTGCCCTGTGCTATTGCCCCCGAATTTCC  550

seq1  ACCCAGGATATCTCTATCTCTCCCTCCTTGATGTTGAGGGATCTGGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGATATCTCTATCTCTCCCTCCTTGATGTTGAGGGATCTGGATGA  600

seq1  GACAGGGATGTGGAAGGGCCACT-GGGAACTGGGATGGCAG-CCGGCTGG  648
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  GACAGGGATGTGGAAGGGCCACTGGGGAACTGGGATGGCAGCCCGGCTGG  650

seq1  GTGCTTAGAGAGACAAGAGTGCTGAC-TTATGAAAAAGTAAGTACACAGG  697
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  GTGCTTAGAGAGACAAGAGTGCTGACTTTATGAAAAAGT-AGTACACAGG  699

seq1  GC-TTTGAAGCAGACAGCGTGGAA-TGTCCCAGCTTTGGAGCAGAAAGAG  745
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCTTTTGAAGCAGACAGCGTGGAATTGTCCCAGCTTTGGAGCAGAAAGAG  749

seq1  CCCCTAGTGTAAGAAATCAATGTGGGGTTCAGCCTCT-GCAATCGTGGCT  794
      |||||| |||||||||   |||||||||||||||||| ||||||||||||
seq2  CCCCTATTGTAAGAAAATCATGTGGGGTTCAGCCTCTGGCAATCGTGGCT  799

seq1  GTGGCCCGA-GATGGTCATAGGCTCCCTCAGTGGAAGTCAGTCATTGTCA  843
      ||||||||| ||||  |||| |||||||||  |||| |||||||||| ||
seq2  GTGGCCCGAGGATGTCCATATGCTCCCTCA--GGAA-TCAGTCATTGGCA  846

seq1  CAAGCCCCTCAGCACAGGGCAACAGAGCTGGGTGGCAAAAATGCATCCGT  893
      | | |||||    | ||||||||||| |||||||    | ||||||||||
seq2  C-ATCCCCT--ATAAAGGGCAACAGA-CTGGGTG---CATATGCATCCGT  889

seq1  GGCTCCCTGGCTTCCCAAACAATGGCATTTCAAA  927
       |||| |||||||||  ||| |||||||||||||
seq2  -GCTCTCTGGCTTCC--AAC-ATGGCATTTCAAA  919