BAC Information

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BAC

Clone NameB6Ng01-036F08
Chromosome7 (Build37)
Map Location 147,327,339 - 147,328,211
singlet/doubletsinglet
Overlap geneMtg1
Upstream geneStk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox
Downstream geneSprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036F08.bB6Ng01-036F08.g
ACCDH864543DH864544
length8691,098
definitionDH864543|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F08, 5' end.DH864544|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagaccaagctgtcctggatctcatagagatctgcctg
cctctgcccacgttttagcaaaaaaagcgtgtaccatgacatccagcgtg
ggactttactgtagactgagatgatattgagctcgatcttattatagaaa
ataagtagtgacaagagaacattagagctggcacaaagtcattacgttta
atagtcagtataatcagtatacatcgtttatattcacatctatcaatatg
cgttgaaagtcatgattgtgtttggtcatcactaaccacaaagcatatta
aatgcttaaataagcaaaaagtaattcattaatgctgtcagtttaatata
ttttgagttatttgtcacatatgatacaattaagatacttggggggggga
gtcgggggctgaaaggttaagagcactttcatgctcttgcaagtttggtt
cccagcactcatacaaatcacgattccagtttcaggggatccaacaccct
ctttctggcccctgcgagcacccggcacacatgtatattgcacatacata
catacatacatacatataaacatggaaaacactcatacactaaataaata
aataaagtaattaattattaaatcctgggagggaaatagaatcggtctag
ccatgacagagactggtttccggttatcccagaaaatgtactcaacgtcc
cctctagtacagaccgggggggtgggagtctaagggccttcaaaagcctg
gtactccggtcacctttgcctggcccagagagggcagcgtacccagtttt
gtaaggctgctttgactccctgaagcattcttaacagctagaacccgatt
attaaaacccagggaaggc
gaattcttcccccacctgatagtcaatcagcttatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gcactaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttta
aatgatagaccctaagctcccgccttaagataattggaaaagagtttgga
aggcattcttgaaaccggagcagataaaagtataattttacccatggtgg
gcccaaagcatgggcccaccacaaagtcatctcattcttaacaggcctag
ataatcaatcatgtcccctataagctccgttgcctgacgtgggaacctct
gaaggacagcaagggaattcctaccttagttgtccccctcccggtaacct
ctggggaagggaaatatgcagatttgggccttatttggccatgaaacgcc
cccatcggggggtttagttaagcaaaaatatctaggcaaaatgggttata
agaagaaaaggtaggacactcagaacggaagtcaaagcctcattgtcact
tagtacagagctctttgcatgagggacaatccctctattggtcttcttga
taatctcggctaaactacatgctacaagcatcctttcactaactaatgtg
tggtacatgccgaaggcaattcgacggacatcttggctggaccttaaatg
tcaggattgagagctctcacaatgctcagctgagaatatgtcacactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147327339_147328211
seq2: B6Ng01-036F08.b_45_913 (reverse)

seq1  GCCTTCCCCTGGTTTTTATTAATCGAGATTCTAGCTGTTTAGGAATTGCT  50
      ||||| |||||| ||||| |||||| | ||||||||||| ||  | ||||
seq2  GCCTT-CCCTGGGTTTTAATAATCG-GGTTCTAGCTGTTAAG--AATGCT  46

seq1  TCAGTGCGTCAAAGCACGACTTTACAGACTGGTGTACGCTGCCCTCTACT  100
      |||| | ||||||||| | |||   | ||||| |||||||||||||| ||
seq2  TCAGGGAGTCAAAGCA-GCCTTACAAAACTGG-GTACGCTGCCCTCT-CT  93

seq1  GGG-CAGGCAAAGGTGAGCCGAGTACCAGGCTTTTGAAGGCCCTTAGACT  149
      ||| ||||||||||||| | ||||||||||||||||||||||||||||||
seq2  GGGCCAGGCAAAGGTGACCGGAGTACCAGGCTTTTGAAGGCCCTTAGACT  143

seq1  -CCACCCCCACGGTCTGTACTAGA-GGGACGTTTGAGTACATTTTCTTGG  197
       |||||||| |||||||||||||| |||||| ||||||||||||||| ||
seq2  CCCACCCCCCCGGTCTGTACTAGAGGGGACG-TTGAGTACATTTTCTGGG  192

seq1  ATAA-CAGAGATCAGTCTCTGTCATGGCTAGTACCGATTCTATTTCCCT-  245
      |||| | || | ||||||||||||||||||| ||||||||||||||||| 
seq2  ATAACCGGAAACCAGTCTCTGTCATGGCTAG-ACCGATTCTATTTCCCTC  241

seq1  CCAAGATTTAATTAATTAATTACTTTATTTATTTATTTAGTGTATGAGTG  295
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATTTAA-TAATTAATTACTTTATTTATTTATTTAGTGTATGAGTG  290

seq1  TTTTCCATGTTTATATGTATGTATGTATGTATGTATGTGCAATATACATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATGTTTATATGTATGTATGTATGTATGTATGTGCAATATACATG  340

seq1  TGTGCCGGGTGCTCGCAGGGGCCAG-AAGAGGGTGTTGGATCCCCTGAAA  394
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTGCCGGGTGCTCGCAGGGGCCAGAAAGAGGGTGTTGGATCCCCTGAAA  390

seq1  CTGGAATCGTGATTTGTATGAGTGCTGGGAACCAAACTTGCAAGAGCATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATCGTGATTTGTATGAGTGCTGGGAACCAAACTTGCAAGAGCATG  440

seq1  AAAGTGCTCTTAACCTTTCAGCCCCCGACTCCCCCCCCCAAGTATCTTAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTCTTAACCTTTCAGCCCCCGACTCCCCCCCCCAAGTATCTTAA  490

seq1  TTGTATCATATGTGACAAATAACTCAAAATATATTAAACTGACAGCATTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCATATGTGACAAATAACTCAAAATATATTAAACTGACAGCATTA  540

seq1  ATGAATTACTTTTTGCTTATTTAAGCATTTAATATGCTTTGTGGTTAGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTACTTTTTGCTTATTTAAGCATTTAATATGCTTTGTGGTTAGTG  590

seq1  ATGACCAAACACAATCATGACTTTCAACGCATATTGATAGATGTGAATAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAACACAATCATGACTTTCAACGCATATTGATAGATGTGAATAT  640

seq1  AAACGATGTATACTGATTATACTGACTATTAAACGTAATGACTTTGTGCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGATGTATACTGATTATACTGACTATTAAACGTAATGACTTTGTGCC  690

seq1  AGCTCTAATGTTCTCTTGTCACTACTTATTTTCTATAATAAGATCGAGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAATGTTCTCTTGTCACTACTTATTTTCTATAATAAGATCGAGCT  740

seq1  CAATATCATCTCAGTCTACAGTAAAGTCCCACGCTGGATGTCATGGTACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCATCTCAGTCTACAGTAAAGTCCCACGCTGGATGTCATGGTACA  790

seq1  CGCTTTTTTTGCTAAAACGTGGGCAGAGGCAGGCAGATCTCTATGAGATC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTTTTGCTAAAACGTGGGCAGAGGCAGGCAGATCTCTATGAGATC  840

seq1  CAGGACAGCTTGGTCTACATAGTGAATTC  873
      |||||||||||||||||||||||||||||
seq2  CAGGACAGCTTGGTCTACATAGTGAATTC  869