BAC Information

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BAC

Clone NameB6Ng01-036L05
Chromosome7 (Build37)
Map Location 84,056,900 - 84,167,563
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC434200, EG244071
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036L05.bB6Ng01-036L05.g
ACCDH864788DH864789
length9751,037
definitionDH864788|Mus musculus domesticus DNA, BAC clone: B6Ng01-036L05, 5' end.DH864789|Mus musculus domesticus DNA, BAC clone: B6Ng01-036L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,166,582 - 84,167,563)(84,056,900 - 84,057,967)
sequence
gaattcccttagagctggaattacagatggctgtgaggtaccccacagga
gtgttggcaactaaacttggatgttttatagaagcagtgcacattcttaa
ctgctgaaccatctccccagcccaaataacatgtctgaggaaggtattta
gatcatcatattgggaatattaaagtataaaatagtttattagttaataa
cttcatacgtattacacatatgtgtcacttagatgctaaatcacaaaata
gtattattctgttcatcaggtatacacgtgtaatcaatttccatataaca
gatgaattctttgccaattctacataaattatataattataaggacacat
aaaggaaaagcaataaagccacccacaccagtaggtaatttattactaag
acattaggtagacttcggatggaaacgggatggctaattaggtgtctgtg
caagaacctggcaagcacggtctgtttccatctcacagacactgaaaggt
ttctttgaataaagaagatatcagcaggcaaaactgagtgttccctgtgc
tgagcactgggacgagagaaacacaagccttgccttatttaatttttgta
tatgaacagtgacagcagacttaccctggaaccagatagctcaaatccag
acttctgattccttctctaattgttcatgttcctttgtgagttggtcctt
gttctgccaggatatggggatttggggtgtaacatctgttctggatgtca
gaatgtgtgtctgtgtcctggattggttcacctaagattgaacactgtac
atatctgaagtttaatgatagtcagtgctcaccatgactgattctctgca
gttcagtccctgttagtcacccggccataacatagcaccagacttactag
gatttaaacagtcatattagagtagttggcaggcccagttgaatctggac
ttatttcatggttcatgcagaacac
gaattcagtgacgaatatattccattgggttttcattttgaggaaataag
cgttttcctcaaaagcaacttgatgttacttgtaaagaagtgtttggaaa
tggaatgctgagcctatcgcctgttcaagtaggtatatgatccaagtata
tggcacacctgaggagattttcttgatggatgccaacactatatagaatg
aatatatgtcaatagaaatgctttaaaagtaagaagaaattttaagtata
aaatacaatcatttcacatgacagtcatataaagcaatattttatttcat
aagttaacttcaatatgaaagcagatataaatattaaatggaaaacagta
aatttgtctgcatgggttgtgaagatcattaaaggtaatgatcacaatat
atcttttttacctcagtccacccttcattgtcataatgaaaactagagaa
tattttgaaattccagttttttcacaaaattgtatatgattatgagttta
tacaaaaatacagataaaagctagatattaccaaaaactaaagagggaaa
actcgtttcgtagacctgagctagggaagatagcaccagccatctaatat
tagccgttagcagacagaagcatgtatattgccacgagtagaggacagcc
tgaaccatattgtaagtgagatctctctcaaacaaaacagagcagcaaac
tggagattcttagaagtgaactgttaactttgggaaagagaatagaagtt
gtttgagcttcagagttgcactcagtatggtgatggcagctaaccctgtc
ctcacgctgagtcaccttctagagatgtcttattttgtaacttacactag
ttgctaggacatgctattatcacaggttattcttgctatagggaaactaa
actttacctaggtccaccagaacggttaaatggctggccatgtggcctat
cctaacgccagagtctcattatgagaaatctcagtgtgaagttttgagtt
attaaatgatatctggattcccaggtgagcattctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84166582_84167563
seq2: B6Ng01-036L05.b_46_1020 (reverse)

seq1  GTGTTCATGCATAGAACCATGAAATAAGGTCCAGATTCCAACTGGGCCTG  50
      |||||| ||||| |||||||||||||| ||||||||| ||||||||||||
seq2  GTGTTC-TGCAT-GAACCATGAAATAA-GTCCAGATT-CAACTGGGCCTG  46

seq1  CCAACTACTCTGATATGACTTGTCTAAATCCTAGTAAGTCTGGTGCTATG  100
      ||||||||||| ||||||| ||| ||||||||||||||||||||||||||
seq2  CCAACTACTCTAATATGAC-TGTTTAAATCCTAGTAAGTCTGGTGCTATG  95

seq1  TTATGGCCGGGTTGACTAAACAGGGACTGAAACTGCAGAG-ATCAGTCAT  149
      ||||||||||| ||||| ||||||||||| |||||||||| |||||||||
seq2  TTATGGCCGGG-TGACT-AACAGGGACTG-AACTGCAGAGAATCAGTCAT  142

seq1  GGTGAGCACTGACTATCATTAAACTTCAGATATGTACAAGTGTTCAATCC  199
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  GGTGAGCACTGACTATCATTAAACTTCAGATATGTAC-AGTGTTCAATCT  191

seq1  TAGGTGAACCAATCCAGGACACAGACACACATTCTGACATCCAGAACAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAACCAATCCAGGACACAGACACACATTCTGACATCCAGAACAGA  241

seq1  TGTTACACCCCAAATCCCCATATCCTGGCAGAACAAGGACCAACTCACAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACCCCAAATCCCCATATCCTGGCAGAACAAGGACCAACTCACAA  291

seq1  AGGAACATGAACAATTAGAGAAGGAATCAGAAGTCTGGATTTGAGCTATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATGAACAATTAGAGAAGGAATCAGAAGTCTGGATTTGAGCTATC  341

seq1  TGGTTCCAGGGTAAGTCTGCTGTCACTGTTCATATAC-AAAATTAAATAA  398
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGTTCCAGGGTAAGTCTGCTGTCACTGTTCATATACAAAAATTAAATAA  391

seq1  GGCAAGGCTTGTGTTTCTCTCGTCCCAGTGCTCAGCACAGGGAACACTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGCTTGTGTTTCTCTCGTCCCAGTGCTCAGCACAGGGAACACTCA  441

seq1  GTTTTGCCTGCTGATATCTTCTTTATTCAAAGAAACCTTTCAGTGTCTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCCTGCTGATATCTTCTTTATTCAAAGAAACCTTTCAGTGTCTGT  491

seq1  GAGATGGAAACAGACCGTGCTTGCCAGGTTCTTGCACAGACACCTAATTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAAACAGACCGTGCTTGCCAGGTTCTTGCACAGACACCTAATTA  541

seq1  GCCATCCCGTTTCCATCCGAAGTCTACCTAATGTCTTAGTAATAAATTAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCGTTTCCATCCGAAGTCTACCTAATGTCTTAGTAATAAATTAC  591

seq1  CTACTGGTGTGGGTGGCTTTATTGCTTTTCCTTTATGTGTCCTTATAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGTGTGGGTGGCTTTATTGCTTTTCCTTTATGTGTCCTTATAATT  641

seq1  ATATAATTTATGTAGAATTGGCAAAGAATTCATCTGTTATATGGAAATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTTATGTAGAATTGGCAAAGAATTCATCTGTTATATGGAAATTG  691

seq1  ATTACACGTGTATACCTGATGAACAGAATAATACTATTTTGTGATTTAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACGTGTATACCTGATGAACAGAATAATACTATTTTGTGATTTAGC  741

seq1  ATCTAAGTGACACATATGTGTAATACGTATGAAGTTATTAACTAATAAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGTGACACATATGTGTAATACGTATGAAGTTATTAACTAATAAAC  791

seq1  TATTTTATACTTTAATATTCCCAATATGATGATCTAAATACCTTCCTCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATACTTTAATATTCCCAATATGATGATCTAAATACCTTCCTCAG  841

seq1  ACATGTTATTTGGGCTGGGGAGATGGTTCAGCAGTTAAGAATGTGCACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTATTTGGGCTGGGGAGATGGTTCAGCAGTTAAGAATGTGCACTG  891

seq1  CTTCTATAAAACATCCAAGTTTAGTTGCCAACACTCCTGTGGGGTACCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATAAAACATCCAAGTTTAGTTGCCAACACTCCTGTGGGGTACCTC  941

seq1  ACAGCCATCTGTAATTCCAGCTCTAAGGGAATTC  982
      ||||||||||||||||||||||||||||||||||
seq2  ACAGCCATCTGTAATTCCAGCTCTAAGGGAATTC  975

seq1: chr7_84056900_84057967
seq2: B6Ng01-036L05.g_68_1104

seq1  GAATTCAGTGACGAATATATTCCATTGGGTTTTCATTTTGAGGAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGACGAATATATTCCATTGGGTTTTCATTTTGAGGAAATAAG  50

seq1  CGTTTTCCTCAAAAGCAACTTGATGTTACTTGTAAAGAAGTGTTTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTCCTCAAAAGCAACTTGATGTTACTTGTAAAGAAGTGTTTGGAAA  100

seq1  TGGAATGCTGAGCCTATCGCCTGTTCAAGTAGGTATATGATCCAAGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCTGAGCCTATCGCCTGTTCAAGTAGGTATATGATCCAAGTATA  150

seq1  TGGCACACCTGAGGAGATTTTCTTGATGGATGCCAACACTATATAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACCTGAGGAGATTTTCTTGATGGATGCCAACACTATATAGAATG  200

seq1  AATATATGTCAATAGAAATGCTTTAAAAGTAAGAAGAAATTTTAAGTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGTCAATAGAAATGCTTTAAAAGTAAGAAGAAATTTTAAGTATA  250

seq1  AAATACAATCATTTCACATGACAGTCATATAAAGCAATATTTTATTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATCATTTCACATGACAGTCATATAAAGCAATATTTTATTTCAT  300

seq1  AAGTTAACTTCAATATGAAAGCAGATATAAATATTAAATGGAAAACAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAACTTCAATATGAAAGCAGATATAAATATTAAATGGAAAACAGTA  350

seq1  AATTTGTCTGCATGGGTTGTGAAGATCATTAAAGGTAATGATCACAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCTGCATGGGTTGTGAAGATCATTAAAGGTAATGATCACAATAT  400

seq1  ATCTTTTTTACCTCAGTCCACCCTTCATTGTCATAATGAAAACTAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTACCTCAGTCCACCCTTCATTGTCATAATGAAAACTAGAGAA  450

seq1  TATTTTGAAATTCCAGTTTTTTCACAAAATTGTATATGATTATGAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAAATTCCAGTTTTTTCACAAAATTGTATATGATTATGAGTTTA  500

seq1  TACAAAAATACAGATAAAAGCTAGATATTACCAAAAACTAAAGAGGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAATACAGATAAAAGCTAGATATTACCAAAAACTAAAGAGGGAAA  550

seq1  ACTCGTTTCGTAGACCTGAGCTAGGGAAGATAGCACCAGCCATCTAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTTTCGTAGACCTGAGCTAGGGAAGATAGCACCAGCCATCTAATAT  600

seq1  TAGCCGTTAGCAGACAGAAGCATGTATATTGCCACGAGTAGAGGACAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGTTAGCAGACAGAAGCATGTATATTGCCACGAGTAGAGGACAGCC  650

seq1  TGAACCATATTGTAAGTGAGATCTCTCTCAAACAAAACAGAGCAGCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCATATTGTAAGTGAGATCTCTCTCAAACAAAACAGAGCAGCAAAC  700

seq1  TGGAGATTCTTAGAAGTGAACTGTTAACTTTGGGAAAGAGAATAGAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTCTTAGAAGTGAACTGTTAACTTTGGGAAAGAGAATAGAAGTT  750

seq1  GTTTGAGCTTCAGAGTTGCACTCAGTAATGGTGATGGCAGCTAACCCTGT  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTTGAGCTTCAGAGTTGCACTCAGT-ATGGTGATGGCAGCTAACCCTGT  799

seq1  CCTCCAACGCTGAGTCACCTTCTAGAGATGTCTTATTTTGTAAACTTACA  850
      ||||  ||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTC--ACGCTGAGTCACCTTCTAGAGATGTCTTATTTTGT-AACTTACA  846

seq1  CTAGTTGCTAGGACATGCTATTATTCACAGTTTATTC-TGCCATAAGGGA  899
      ||||||||||||||||||||||| |||||| |||||| ||| || |||||
seq2  CTAGTTGCTAGGACATGCTATTA-TCACAGGTTATTCTTGCTAT-AGGGA  894

seq1  AACTTAAACTTTTACCTATGGTCCACACAG-ACAGTTAAAATGCTGGCCA  948
      ||| ||||| |||||||| ||||||| ||| || ||||||  ||||||||
seq2  AAC-TAAAC-TTTACCTA-GGTCCAC-CAGAACGGTTAAATGGCTGGCCA  940

seq1  GTTGTGCCCCTATTCCCCTAACAGCACAGAGTCTCCATTATGAGAAAAAT  998
        ||||  |||||   |||||| || |||||||| |||||||||  ||||
seq2  --TGTG-GCCTAT---CCTAAC-GC-CAGAGTCT-CATTATGAG--AAAT  979

seq1  CTCAGTGTTTGAAGCTTTTTGAGTTTATTATATTGTATATCTGGTGATTT  1048
      |||||||  |||||  ||||||| |||||| ||   |||||||  |||| 
seq2  CTCAGTG--TGAAG--TTTTGAG-TTATTAAAT--GATATCTG--GATT-  1019

seq1  CACAAGGTGAGCATTTCTAT  1068
        | ||||||||| ||||||
seq2  -CCCAGGTGAGCA-TTCTAT  1037