BAC Information

Click to search

BAC

Clone NameB6Ng01-037D03
Chromosome7 (Build37)
Map Location 60,880,799 - 60,881,955
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620782, LOC100040692, Gm1865, LOC100040718
Downstream geneLOC668789, Mrps33p, LOC622146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037D03.bB6Ng01-037D03.g
ACCDH865147DH865148
length1,141658
definitionDH865147|Mus musculus domesticus DNA, BAC clone: B6Ng01-037D03, 5' end.DH865148|Mus musculus domesticus DNA, BAC clone: B6Ng01-037D03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtgtctttatttttgttaaagaagtataagttacacagaaga
atcaatcaagtaaaacttaagaagaaaaacttaaacagataatacaatga
taaaccatggattttaaaagcatatgtctgtgtctgtgaatatgtttctt
gttgtagggatttctagagaactgaaatattcaggaatatcaacaccttg
agtcattttttaggactgttaccttagtgtgtgtgtacccacctcctaaa
tctgtttcctaccagtaacatatagtgccaaaagctttagtgattcccaa
tgagacaatcaatatgaaaatagattttaaatatttaatttcatgaaaac
taaagaatttcaagcttttgttgtttattattatcacgaggcaattcata
atgatataaaaagagttaaaattctcataaaactatgatctactaatata
tatttaggattttttcagagattattcataatttggatagtaaacaccgg
acatgcactttgccttttcaatgaggacttgaacttagtaactgctgaca
ttgtgttgactcgaatcagtcatataaataagaactgatggcatgaaaac
tcagctagctttatgctgtatttgttcccctgtgctgctttctaagtctg
agtcaaaagggaaaacaagctgagcgttactctgctggattttccttctg
ttgagttaattaacaatgagcccctgagattacacaataattttgtacag
catatctggttagagagaacaaaccatgttttatttccctattgatgctt
agctatctttggaaagagttacaaccaaacaaatttctcaagcaataggg
gaactgactattcttgttactcattgcataatcttctttgttagtccctt
aatacagactacatatatccaaaggatttctcctgcatttgtcttatttc
tactccagaaactggtggcatagccacattcctagctcagtcagcatgtt
tcactcacagatagagttctgtttccctaagtctgcccttgctgctcata
tatctgaagatctctcccactgacatttgaaaccattacatagatttcta
tacctgatgcaatatttcttactttgtaagaattctctagt

gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagcctggccttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtggttaagatagggcgga
ttctagatgaaattcaggacaagctatcagaagtaaagcggggagagaga
gtaggagcaaagagaaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttagtagctctgaagcaggtgaagaatcctcctctgagg
aaacagactgggaggaagaagcagcccattaccagccagctaattggtca
agaaaaaagccaaaagcggctggcgaaggccagttttgctgattggcctc
tgggcagtcggcttcaaggtccgcccttttgcggagcccccgccctgcgt
agtgcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60880799_60881955
seq2: B6Ng01-037D03.b_49_1189

seq1  GAATTCATGTGTCTTTATTTTTGTTAAAGAAGTATAAGTTACACAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGTCTTTATTTTTGTTAAAGAAGTATAAGTTACACAGAAGA  50

seq1  ATCAATCAAGTAAAACTTAAGAAGAAAAACTTAAACAGATAATACAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAAGTAAAACTTAAGAAGAAAAACTTAAACAGATAATACAATGA  100

seq1  TAAACCATGGATTTTAAAAGCATATGTCTGTGTCTGTGAATATGTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATGGATTTTAAAAGCATATGTCTGTGTCTGTGAATATGTTTCTT  150

seq1  GTTGTAGGGATTTCTAGAGAACTGAAATATTCAGGAATATCAACACCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGGGATTTCTAGAGAACTGAAATATTCAGGAATATCAACACCTTG  200

seq1  AGTCATTTTTTAGGACTGTTACCTTAGTGTGTGTGTACCCACCTCCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTTTTAGGACTGTTACCTTAGTGTGTGTGTACCCACCTCCTAAA  250

seq1  TCTGTTTCCTACCAGTAACATATAGTGCCAAAAGCTTTAGTGATTCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCCTACCAGTAACATATAGTGCCAAAAGCTTTAGTGATTCCCAA  300

seq1  TGAGACAATCAATATGAAAATAGATTTTAAATATTTAATTTCATGAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAATCAATATGAAAATAGATTTTAAATATTTAATTTCATGAAAAC  350

seq1  TAAAGAATTTCAAGCTTTTGTTGTTTATTATTATCACGAGGCAATTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTTCAAGCTTTTGTTGTTTATTATTATCACGAGGCAATTCATA  400

seq1  ATGATATAAAAAGAGTTAAAATTCTCATAAAACTATGATCTACTAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAAAAAGAGTTAAAATTCTCATAAAACTATGATCTACTAATATA  450

seq1  TATTTAGGATTTTTTCAGAGATTATTCATAATTTGGATAGTAAACACCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGGATTTTTTCAGAGATTATTCATAATTTGGATAGTAAACACCGG  500

seq1  ACATGCACTTTGCCTTTTCAATGAGGACTTGAACTTAGTAACTGCTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCACTTTGCCTTTTCAATGAGGACTTGAACTTAGTAACTGCTGACA  550

seq1  TTGTGTTGACTCGAATCAGTCATATAAATAAGAACTGATGGCATGAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGACTCGAATCAGTCATATAAATAAGAACTGATGGCATGAAAAC  600

seq1  TCAGCTAGCTTTATGCTGTATTTGTTCCCCTGTGCTGCTTTCTAAGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTAGCTTTATGCTGTATTTGTTCCCCTGTGCTGCTTTCTAAGTCTG  650

seq1  AGTCAAAAGGGAAAACAAGCTGAGCGTTACTCTGCTGGATTTTCCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAAGGGAAAACAAGCTGAGCGTTACTCTGCTGGATTTTCCTTCTG  700

seq1  TTGAGTTAATTAACAATGAGCCCCTGAGATTACACAATAATTTTGTACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTAATTAACAATGAGCCCCTGAGATTACACAATAATTTTGTACAG  750

seq1  CATATCTGGTTAGAGAGAACAAACCATGTTTTATTTCCCTATTGATGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGGTTAGAGAGAACAAACCATGTTTTATTTCCCTATTGATGCTT  800

seq1  AGCTATCTTTGGAAAGAGTTACAACCAAACAAATTTCTCAAGCAATAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCTTTGGAAAGAGTTACAACCAAACAAATTTCTCAAGCAATAGGG  850

seq1  GAACTGACTATTCTTGTTACTCATTGCATAATCTTCTTTGTTAGTCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACTATTCTTGTTACTCATTGCATAATCTTCTTTGTTAGTCCCTT  900

seq1  AATACAGACTACATATATCCAAAGGATTTCTCCTGCATTTGTCTTATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGACTACATATATCCAAAGGATTTCTCCTGCATTTGTCTTATTTC  950

seq1  TACTCCAAGAAACTGGTGGCATAGGCCACATTCCTAGCTCAGTCAGCAAT  1000
      |||||| |||||||||||||||| ||||||||||||||||||||||| ||
seq2  TACTCC-AGAAACTGGTGGCATA-GCCACATTCCTAGCTCAGTCAGC-AT  997

seq1  GTTTCACTCACAAGATAAGAGTTCTGTTTCCCTAAGTCTGCCCCTTGCTG  1050
      ||||||||||| |||| ||||||||||||||||||||||| |||||||||
seq2  GTTTCACTCAC-AGAT-AGAGTTCTGTTTCCCTAAGTCTG-CCCTTGCTG  1044

seq1  CTCAATTATAATCTG-AGATCTCTTCCCACTGACATTTGATACACATTAC  1099
      ||||  ||| ||||| ||||||| |||||||||||||||| || ||||||
seq2  CTCA--TAT-ATCTGAAGATCTC-TCCCACTGACATTTGAAAC-CATTAC  1089

seq1  ATAGGATTTTCTATACCTGAATGCATATATTTCCTTTACTTTGTAAGGAT  1149
      ||||   |||||||||||| ||||| |||||||  |||||||||||| ||
seq2  ATAG--ATTTCTATACCTG-ATGCA-ATATTTC--TTACTTTGTAAGAAT  1133

seq1  TCTCTAGT  1157
      ||||||||
seq2  TCTCTAGT  1141


| Home | SequenceCutter | Blast | Download |