BAC Information

Click to search

BAC

Clone NameB6Ng01-037D14
Chromosome6 (Build37)7 (Build37)
Map Location 27,238,089 - 27,238,76968,330,945 - 68,331,511
singlet/doubletsingletsinglet
Overlap geneGrm8
Upstream geneLOC100041247
Downstream gene6530409C15Rik, AA407452, LOC100041304
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037D14.bB6Ng01-037D14.g
ACCDH865167DH865168
length684943
definitionDH865167|Mus musculus domesticus DNA, BAC clone: B6Ng01-037D14, 5' end.DH865168|Mus musculus domesticus DNA, BAC clone: B6Ng01-037D14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(27,238,089 - 27,238,769)(68,330,945 - 68,331,511)
sequence
gaattcacatttgtaggccccattttaggttctcctttgtgcctttccag
agaggaaggtggacttacatccacttcaaagcacccaattgtttctggtt
caaaatattaattggacttggaagctgagaaaatagcaggtcatgagaag
atgtgatgaaaaagcacctcccctctttggtcatggggaagttgggggga
aggaggtgggcttctaaagagctaagaagaatgaaaagagatacctaaga
tagtactactttcagtatctcttggtggatttatatggttttgtgtgaga
taataccatcctttcctttacctagcagtacactacattaagaagtcaag
ctattgtgttacccaaggtatgcaactttcaatatcaacaaatatttaga
tttggaaaaaaaaaaaccacttcatttggtttatttccaagtgatattac
agtgacattttcctggacatctagtagaacctacctatccactgatcact
ccccacactcccttgcatgtacagctgtctatgcgcaatttctcttctca
caaacacctggaaggaagttttttttactaccttttgtagattcaaactt
gtatggtgagtgacttttttgagttattgctttgtgtctatacttttaaa
cattgatatataattgtagtaaattacaccctat
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcaatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
tagttcttcttgtttccacttgggttgatttcacccctgagttgaatatt
ccctgccgtctactcctcttgggtgaatttgcttcctttttttctgaagc
ttttagatgtgtggtcaagctgctggatgtgcctctctcccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_27238089_27238769
seq2: B6Ng01-037D14.b_50_733 (reverse)

seq1  ATAGGGTGTTATTTACTACAATTATATATCATTGTTT-AAAGTATAGACA  49
      ||||||||| ||||||||||||||||||||| ||||| ||||||||||||
seq2  ATAGGGTGTAATTTACTACAATTATATATCAATGTTTAAAAGTATAGACA  50

seq1  CAAAGCAATAACTCAAAAAAGTCACTCACCATACAAGTTTGAATCTAC-A  98
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAAGCAATAACTCAAAAAAGTCACTCACCATACAAGTTTGAATCTACAA  100

seq1  AAGGTAGTAAAAAAAACTTCCTTCCAGGTGTTTGTGAGAAGAGAAATTGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGTAAAAAAAACTTCCTTCCAGGTGTTTGTGAGAAGAGAAATTGC  150

seq1  GCATAGACAGCTGTACA-GCAAGGGAGTGTGGGGAGTGATCAGTGGATAG  197
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCATAGACAGCTGTACATGCAAGGGAGTGTGGGGAGTGATCAGTGGATAG  200

seq1  GTAGGTTCTACTAGATGTCCAGGAAAATGTCACTGTAATATCACTTGGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTCTACTAGATGTCCAGGAAAATGTCACTGTAATATCACTTGGAA  250

seq1  ATAAACCAAATGAAGTGGTTTTTTTTTTTCCAAATCTAAATATTTGTTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCAAATGAAGTGGTTTTTTTTTTTCCAAATCTAAATATTTGTTGA  300

seq1  TATTGAAAGTTGCATACCTTGGGTAACACAATAGCTTGACTTCTTAATGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAAGTTGCATACCTTGGGTAACACAATAGCTTGACTTCTTAATGT  350

seq1  AGTGTACTGCTAGGTAAAGGAAAGGATGGTATTATCTCACACAAAACCAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTGCTAGGTAAAGGAAAGGATGGTATTATCTCACACAAAACCAT  400

seq1  ATAAATCCACCAAGAGATACTGAAAGTAGTACTATCTTAGGTATCTCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCACCAAGAGATACTGAAAGTAGTACTATCTTAGGTATCTCTTT  450

seq1  TCATTCTTCTTAGCTCTTTAGAAGCCCACCTCCTTCCCCCCAACTTCCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTCTTAGCTCTTTAGAAGCCCACCTCCTTCCCCCCAACTTCCCC  500

seq1  ATGACCAAAGAGGGGAGGTGCTTTTTCATCACATCTTCTCATGACCTGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAAGAGGGGAGGTGCTTTTTCATCACATCTTCTCATGACCTGCT  550

seq1  ATTTTCTCAGCTTCCAAGTCCAATTAATATTTTGAACCAGAAACAATTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCAGCTTCCAAGTCCAATTAATATTTTGAACCAGAAACAATTGG  600

seq1  GTGCTTTGAAGTGGATGTAAGTCCACCTTCCTCTCTGGAAAGGCACAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTGAAGTGGATGTAAGTCCACCTTCCTCTCTGGAAAGGCACAAAG  650

seq1  GAGAACCTAAAATGGGGCCTACAAATGTGAATTC  681
      ||||||||||||||||||||||||||||||||||
seq2  GAGAACCTAAAATGGGGCCTACAAATGTGAATTC  684

seq1: chr7_68330945_68331511
seq2: B6Ng01-037D14.g_447_1012 (reverse)

seq1  ACGGGAGAGA-GCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTA  49
      |||||||||| |||||| | ||||||||||| |||||||||||||||  |
seq2  ACGGGAGAGAGGCACAT-CCAGCAGCTTGACCACACATCTAAAAGCTTCA  49

seq1  GAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAAT  99
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  GAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGGAATATT  99

seq1  CAAACTCAGGGGTGAAATCAA-CCAAGTGGAAACAAGAAGAACTATTCAA  148
      | ||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  C-AACTCAGGGGTGAAATCAACCCAAGTGGAAACAAGAAGAACTA-TCAA  147

seq1  AGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGA  197

seq1  TAAACCCTTAGCTAGACTCACTAGAGGGCACAGAGACAAAATCCTAATTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCTTAGCTAGACTCACTAGAGGGCACAGAGACAAAATCCTAATTA  247

seq1  ACAAAATCAGAACTGAAAAGGGAGACATAACAACAGATCCTGAAGAAATC  298
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATC  297

seq1  CAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGA  347

seq1  AAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGT  397

seq1  TGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAA  447

seq1  ATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGA  497

seq1  CGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAG  547

seq1  TTCTGCACAAACTTTTTCA  567
      |||||||||||||||||||
seq2  TTCTGCACAAACTTTTTCA  566