BAC Information

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BAC

Clone NameB6Ng01-037E02
Chromosome7 (Build37)
Map Location 35,722,639 - 35,878,005
singlet/doubletdoublet
Overlap genePepd, Cebpg
Upstream geneAbpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15, Chst8
Downstream geneCebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037E02.bB6Ng01-037E02.g
ACCDH865189DH865190
length1,066449
definitionDH865189|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E02, 5' end.DH865190|Mus musculus domesticus DNA, BAC clone: B6Ng01-037E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,722,639 - 35,723,718)(35,877,551 - 35,878,005)
sequence
gaattcagctcccatttacactgtgatttcttaggaaaggaaggagccct
ccagatgcaggacattagaggaagatgaagtatccaggcaggaagtccct
agtgaaggtgtagacaggccagcttgctcttaatccttgaaggcagaatg
ttaaatgaaggcatcaatagaggtcaaagggcagagcctttatagggttc
aggagtactctgtaggagcaatataatcattaccatcattgatcagatct
gctgatcagcatgactgctggtcaatgtttttatttctttgagaaccaag
ggccttggatgtgccaggcggtgccactgaaccacacccaggtagggcag
gtgcttcactttggggctggctgcttgtctctcccaccctgtcctacagt
gacccacagagccaatgctatctatagacaaggaggtcaagactgagagg
cagaaggcctcatccatgccctgcagctggggtatggcagtattgtgctg
actcgaagacttccaggtcgcagaggctgcctccagctctacacttgcct
gacagaggtgaaagtctgatttacaggaggcttgcttgtgcagaggtgac
ccaggctgccgagtccctgtgatttcctgaagctgggaatgaatcccacc
aaaaggagcaaactgctgctttgagtcccgtgggctggaagcacttttct
gatgtgggcagcacccaggcccaggcttagtccatcatggaaaagtgaca
ggaagctctttaggcaggaattccccagccaggcctatagtgcccagccc
ggtctagccttggcatccctgcccatcttttttaacgggacagctagcag
cagtgtgtgcttgctctgagggacggtgggagtggcccagggcatagctg
attccctgatgtcttatatgcatatgatgtagatgcatgtatgtatgttt
atataaaacgcacatatcagagatggcatgcagaggctgacttcatgcca
gaaccagttaagaagcatagcggtgcacgcctgtattctagcttgggagt
ggaggcaggaggctca
ctgccatgctctttgtcatctgtctgtccgtctgtccatccatctgtctg
cctgcccatctgtctgtgaccttaataactcctctaataaacttcttatc
cccagtatccccttgaagttcatatccaaggccttcctatatcttctttg
ccctggggcagggacagggtttcactatgtaaaccaggggagccttgaaa
tggtgtgtgtcaccacctctggaagataacatcctcaaatgagctaaaag
caactggttgccaacctacagctcctcatccagtgaaaggaagctgcaga
gatgggggtggagaaagatgggcgtggtagcacacacttgtgatcccagc
actcgggaggcagggatggagagatggagagcttgaggccagcctggact
acaaaagaggaagaggaggagcaggaggaagaggaggagggagggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_35722639_35723718
seq2: B6Ng01-037E02.b_48_1113

seq1  GAATTCAGCTCCCATTTACACTGTGATTTCTTAGGAAAGGAAGGAGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCCCATTTACACTGTGATTTCTTAGGAAAGGAAGGAGCCCT  50

seq1  CCAGATGCAGGACATTAGAGGAAGATGAAGTATCCAGGCAGGAAGTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCAGGACATTAGAGGAAGATGAAGTATCCAGGCAGGAAGTCCCT  100

seq1  AGTGAAGGTGTAGACAGGCCAGCTTGCTCTTAATCCTTGAAGGCAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGTGTAGACAGGCCAGCTTGCTCTTAATCCTTGAAGGCAGAATG  150

seq1  TTAAATGAAGGCATCAATAGAGGTCAAAGGGCAGAGCCTTTATAGGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAAGGCATCAATAGAGGTCAAAGGGCAGAGCCTTTATAGGGTTC  200

seq1  AGGAGTACTCTGTAGGAGCAATATAATCATTACCATCATTGATCAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACTCTGTAGGAGCAATATAATCATTACCATCATTGATCAGATCT  250

seq1  GCTGATCAGCATGACTGCTGGTCAATGTTTTTATTTCTTTGAGAACCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCAGCATGACTGCTGGTCAATGTTTTTATTTCTTTGAGAACCAAG  300

seq1  GGCCTTGGATGTGCCAGGCGGTGCCACTGAACCACACCCAGGTAGGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGATGTGCCAGGCGGTGCCACTGAACCACACCCAGGTAGGGCAG  350

seq1  GTGCTTCACTTTGGGGCTGGCTGCTTGTCTCTCCCACCCTGTCCTACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCACTTTGGGGCTGGCTGCTTGTCTCTCCCACCCTGTCCTACAGT  400

seq1  GACCCACAGAGCCAATGCTATCTATAGACAAGGAGGTCAAGACTGAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAGAGCCAATGCTATCTATAGACAAGGAGGTCAAGACTGAGAGG  450

seq1  CAGAAGGCCTCATCCATGCCCTGCAGCTGGGGTATGGCAGTATTGTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCCTCATCCATGCCCTGCAGCTGGGGTATGGCAGTATTGTGCTG  500

seq1  ACTCGAAGACTTCCAGGTCGCAGAGGCTGCCTCCAGCTCTACACTTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAAGACTTCCAGGTCGCAGAGGCTGCCTCCAGCTCTACACTTGCCT  550

seq1  GACAGAGGTGAAAGTCTGATTTACAGGAGGCTTGCTTGTGCAGAGGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGTGAAAGTCTGATTTACAGGAGGCTTGCTTGTGCAGAGGTGAC  600

seq1  CCAGGCTGCCGAGTCCCTGTGATTTCCTGAAGCTGGGAATGAATCCCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGCCGAGTCCCTGTGATTTCCTGAAGCTGGGAATGAATCCCACC  650

seq1  AAAAGGAGCAAACTGCTGCTTTGAGTCCCGTGGGCTGGAAGCACTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGCAAACTGCTGCTTTGAGTCCCGTGGGCTGGAAGCACTTTTCT  700

seq1  GATGTGGGCAGCACCCAGGCCCAGGCTTAGTCCATCATGG-AAAGTGACA  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATGTGGGCAGCACCCAGGCCCAGGCTTAGTCCATCATGGAAAAGTGACA  750

seq1  GGAAGCTCTTTAGGCAGGAATTCCCCAGCCAGGCCTATAGTGCCCAGCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTCTTTAGGCAGGAATTCCCCAGCCAGGCCTATAGTGCCCAGCCC  800

seq1  GGTCTAGCCTTGGCCATCCCTGCCCATCTTTTTAAACGGGACAGCTAGCA  849
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  GGTCTAGCCTTGG-CATCCCTGCCCATCTTTTTTAACGGGACAGCTAGCA  849

seq1  GCAGGTGTGTGCTTGCTCTGAGGGACGGTGGGAGTGGCCCAGGGCATAGC  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCA-GTGTGTGCTTGCTCTGAGGGACGGTGGGAGTGGCCCAGGGCATAGC  898

seq1  TGATCCCTTGATGTCTTATATGCATATGTATGTAAGATGCATGTATGTAT  949
      |||| || |||||||||||||||||||| |||| ||||||||||||||||
seq2  TGATTCCCTGATGTCTTATATGCATATG-ATGT-AGATGCATGTATGTAT  946

seq1  GTTTATATAAAACGCACATATCAGAGGATGGCATGCAGGAAGCCTGACTT  999
      ||||||||||||||||||||||||| ||||||||||||  || |||||||
seq2  GTTTATATAAAACGCACATATCAGA-GATGGCATGCAG--AGGCTGACTT  993

seq1  CAATGCCCAGAACCAAGTTAAGGAAGCATAGCGGTGCACGCCTGTAATCC  1049
      | ||| |||||||| |||||| ||||||||||||||||||||||| || |
seq2  C-ATG-CCAGAACC-AGTTAA-GAAGCATAGCGGTGCACGCCTGT-ATTC  1038

seq1  TAGCCTGTGGGAGGTGGAGGCAGGAGGCTCA  1080
      ||||   ||||| ||||||||||||||||||
seq2  TAGC--TTGGGA-GTGGAGGCAGGAGGCTCA  1066

seq1: chr7_35877551_35878005
seq2: B6Ng01-037E02.g_69_523 (reverse)

seq1  CTCCCCCTCCCTCCTCCTCTTCCTCCTGCTCCTCCTCTTCCTCTTTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCCTCCTCCTCTTCCTCCTGCTCCTCCTCTTCCTCTTTTGTA  50

seq1  GTCCAGGCTGGCCTCAAGCTCTCCATCTCTCCATCCCTGCCTCCCGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGCTGGCCTCAAGCTCTCCATCTCTCCATCCCTGCCTCCCGAGTG  100

seq1  CTGGGATCACAAGTGTGTGCTACCACGCCCATCTTTCTCCACCCCCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATCACAAGTGTGTGCTACCACGCCCATCTTTCTCCACCCCCATCT  150

seq1  CTGCAGCTTCCTTTCACTGGATGAGGAGCTGTAGGTTGGCAACCAGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCTTCCTTTCACTGGATGAGGAGCTGTAGGTTGGCAACCAGTTGC  200

seq1  TTTTAGCTCATTTGAGGATGTTATCTTCCAGAGGTGGTGACACACACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTCATTTGAGGATGTTATCTTCCAGAGGTGGTGACACACACCAT  250

seq1  TTCAAGGCTCCCCTGGTTTACATAGTGAAACCCTGTCCCTGCCCCAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCTCCCCTGGTTTACATAGTGAAACCCTGTCCCTGCCCCAGGGC  300

seq1  AAAGAAGATATAGGAAGGCCTTGGATATGAACTTCAAGGGGATACTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGATATAGGAAGGCCTTGGATATGAACTTCAAGGGGATACTGGGG  350

seq1  ATAAGAAGTTTATTAGAGGAGTTATTAAGGTCACAGACAGATGGGCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAGTTTATTAGAGGAGTTATTAAGGTCACAGACAGATGGGCAGGC  400

seq1  AGACAGATGGATGGACAGACGGACAGACAGATGACAAAGAGCATGGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGATGGATGGACAGACGGACAGACAGATGACAAAGAGCATGGCAGG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455