BAC Information

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BAC

Clone NameB6Ng01-037P08
Chromosome7 (Build37)
Map Location 7,627,417 - 7,802,756
singlet/doubletdoublet
Overlap geneLOC100042636, LOC665485, EG625353, Vmn2r-ps40
Upstream geneZim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368
Downstream geneVmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P08.bB6Ng01-037P08.g
ACCDH865667DH865668
length969893
definitionDH865667|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P08, 5' end.DH865668|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,801,797 - 7,802,756)(7,627,417 - 7,628,313)
sequence
gaattccttggacaaaattaagttatatgtcaatgggaattctacataaa
aaccctgaaatagactgtccttttcaaagccagccaaaacacaaaaatct
ggtagtcaaacactgttggtatcttcttttatcactgattaaccataaca
taatttccaaatacaaagaacagtaggaaatttttgtgactcacaaatgc
tctgttcctctagctggaatttaatcttatgtaaactgaatgtcctcagg
ccttgggagcataagacttataatacaatcacattgacatttgatcccaa
atgagaccaactcattgcttccacttgactattccatctattgtagacag
gattttttaaagtttctgggatgagaccaattctctattttgattgctaa
aatattagagctaatattcctcaaaaactgctgatatccctggattgctc
attcttttccctactttggatttttgtcaacttcctagcattcacacaga
aaataattatttttggagttgtgcttcttataacatatttaggaagcact
acttgaccataaatgagagttatatacccctcatatgtgtccatgtcgca
cattgcatggacatataagcatcatttattgcagtatactttagcatttt
atgtggagaaacagtaagtaaataacaagtttatatatagagaaatttat
tatttttacctattgcctgatgtatagtagcgcttttgaaaaaaaattgc
aattatatttcctaacattcaactggtatacttttttaaggaaggctatt
ggacaaataccaaacccaagttttattatcagggcctaattttcaagttg
gatatcctaactcttttctttttttctcacatttaaaacatcattgcttg
accttcctcaggcaatggtaggaatggggaattatcttttgacttcattc
tttctccagacatctgagc
gaattcattccctatgacacattgagactctgacttctactgggaaaaga
tgtataatagctactggagaatttactagctcaaacttgttgacacagaa
acaacacaaaattgaacaggtagtttgtaagtatatgtacatacttatat
gtgtgagttcatgtgaaggtatatatttcattattgtatttaagtgattc
ctgtcataagtcataggaagaaggcagaatatgagaggaaatataatgtt
tatgtttgaatagcagtaaatattaatgaaataagccccaagatgtttcc
tcatctggcaatcattaatcaaaatttctggttattgttcatgatgtgca
ctaattttagcactgaaggaaaaatatctctgtagatactttgtactaaa
agatccttcaccttaattccttcttcatatggaaagctgagcactttaat
ccttgcctcacctccattcttatgagaatcaaggatgaaatcagtgttga
gaaacaaaatgagcaaaataacagagggatcctctggaaagggtggtaac
ccaggtggtttgtgttaagcaattatactccattctaaaattgtaatccc
caacatggtaacaacatgaacagtgattgtaatttgcacttaatttccaa
gtcatttcagcgaatgttgatgggcttccatggttttcagaattcttatc
tccaacaatgcatttgtggacagatattatttgataagttgcctagagcc
taagaagttggattagctataaatagaatatgtgttctaccagagaatct
gattcagatcacagtacatatgacagattcctaagatgtaaatttaaaat
ttatgacagcatattatttgctctagcgaacctgtatatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7801797_7802756
seq2: B6Ng01-037P08.b_45_1013 (reverse)

seq1  GCTCAGAATGTCTGGAGAAAGAATGATGTCAAAAGATAATTCCCCATTCC  50
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  GCTCAG-ATGTCTGGAGAAAGAATGAAGTCAAAAGATAATTCCCCATTCC  49

seq1  TA-CATTGCCTGTAGTAGGTCATGCAATGATGTTTTAAATGTGAGAAATA  99
      || |||||||||  | |||||| ||||||||||||||||||||||||| |
seq2  TACCATTGCCTGAGGAAGGTCAAGCAATGATGTTTTAAATGTGAGAAAAA  99

seq1  AAG-AAAGAGTTAGGATATCCAACTTGAAAATTA-GCCCTGATAATAAAA  147
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGAAAAGAGTTAGGATATCCAACTTGAAAATTAGGCCCTGATAATAAAA  149

seq1  C-TAGGTTTGGT-TTTGT-CTATAGCC-TCCTTTAAAAAGTATACCAGTT  193
      | | |||||||| ||||| | |||||| ||||| ||||||||||||||||
seq2  CTTGGGTTTGGTATTTGTCCAATAGCCTTCCTTAAAAAAGTATACCAGTT  199

seq1  GAATGTTAGG-AATATAATTGCAATTTTTTT--CAAAGCGCTACTATACA  240
      |||||||||| ||||||||||||||||||||   ||||||||||||||||
seq2  GAATGTTAGGAAATATAATTGCAATTTTTTTTCAAAAGCGCTACTATACA  249

seq1  TCAGGCAATAGGTAAAAATAATAAATTTCTCTATATATAAACTTGTTATT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAATAGGTAAAAATAATAAATTTCTCTATATATAAACTTGTTATT  299

seq1  TACTTACTGTTTCTCCACATAAAATGCTAAAGTATACTGCAATAAATGAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTGTTTCTCCACATAAAATGCTAAAGTATACTGCAATAAATGAT  349

seq1  GCTTATATGTCCATGCAATGTGCGACATGGACACATATGAGGGGTATATA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATATGTCCATGCAATGTGCGACATGGACACATATGAGGGGTATATA  399

seq1  ACTCTCATTTATGGTCAAGTAGTGCTTCCTAAATATGTTATAAGAAGCAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCATTTATGGTCAAGTAGTGCTTCCTAAATATGTTATAAGAAGCAC  449

seq1  AACTCCAAAAATAATTATTTTCTGTGTGAATGCTAGGAAGTTGACAAAAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAAAAATAATTATTTTCTGTGTGAATGCTAGGAAGTTGACAAAAA  499

seq1  TCCAAAGTAGGGAAAAGAATGAGCAATCCAGGGATATCAGCAGTTTTTGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTAGGGAAAAGAATGAGCAATCCAGGGATATCAGCAGTTTTTGA  549

seq1  GGAATATTAGCTCTAATATTTTAGCAATCAAAATAGAGAATTGGTCTCAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTAGCTCTAATATTTTAGCAATCAAAATAGAGAATTGGTCTCAT  599

seq1  CCCAGAAACTTTAAAAAATCCTGTCTACAATAGATGGAATAGTCAAGTGG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAACTTTAAAAAATCCTGTCTACAATAGATGGAATAGTCAAGTGG  649

seq1  AAGCAATGAGTTGGTCTCATTTGGGATCAAATGTCAATGTGATTGTATTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGAGTTGGTCTCATTTGGGATCAAATGTCAATGTGATTGTATTA  699

seq1  TAAGTCTTATGCTCCCAAGGCCTGAGGACATTCAGTTTACATAAGATTAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTATGCTCCCAAGGCCTGAGGACATTCAGTTTACATAAGATTAA  749

seq1  ATTCCAGCTAGAGGAACAGAGCATTTGTGAGTCACAAAAATTTCCTACTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGCTAGAGGAACAGAGCATTTGTGAGTCACAAAAATTTCCTACTG  799

seq1  TTCTTTGTATTTGGAAATTATGTTATGGTTAATCAGTGATAAAAGAAGAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTATTTGGAAATTATGTTATGGTTAATCAGTGATAAAAGAAGAT  849

seq1  ACCAACAGTGTTTGACTACCAGATTTTTGTGTTTTGGCTGGCTTTGAAAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGTGTTTGACTACCAGATTTTTGTGTTTTGGCTGGCTTTGAAAA  899

seq1  GGACAGTCTATTTCAGGGTTTTTATGTAGAATTCCCATTGACATATAACT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTCTATTTCAGGGTTTTTATGTAGAATTCCCATTGACATATAACT  949

seq1  TAATTTTGTCCAAGGAATTC  960
      ||||||||||||||||||||
seq2  TAATTTTGTCCAAGGAATTC  969

seq1: chr7_7627417_7628313
seq2: B6Ng01-037P08.g_73_965

seq1  GAATTCATTCCCTATGACACATTGAGACTCTGACTTCTACTGGGAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCCTATGACACATTGAGACTCTGACTTCTACTGGGAAAAGA  50

seq1  TGTATAATAGCTACTGGAGAATTTACTAGCTCAAACTTGTTGACACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATAGCTACTGGAGAATTTACTAGCTCAAACTTGTTGACACAGAA  100

seq1  ACAACACAAAATTGAACAGGTAGTTTGTAAGTATATGTACATACTTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACAAAATTGAACAGGTAGTTTGTAAGTATATGTACATACTTATAT  150

seq1  GTGTGAGTTCATGTGAAGGTATATATTTCATTATTGTATTTAAGTGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTTCATGTGAAGGTATATATTTCATTATTGTATTTAAGTGATTC  200

seq1  CTGTCATAAGTCATAGGAAGAAGGCAGAATATGAGAGGAAATATAATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATAAGTCATAGGAAGAAGGCAGAATATGAGAGGAAATATAATGTT  250

seq1  TATGTTTGAATAGCAGTAAATATTAATGAAATAAGCCCCAAGATGTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGAATAGCAGTAAATATTAATGAAATAAGCCCCAAGATGTTTCC  300

seq1  TCATCTGGCAATCATTAATCAAAATTTCTGGTTATTGTTCATGATGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGCAATCATTAATCAAAATTTCTGGTTATTGTTCATGATGTGCA  350

seq1  CTAATTTTAGCACTGAAGGAAAAATATCTCTGTAGATACTTTGTACTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTAGCACTGAAGGAAAAATATCTCTGTAGATACTTTGTACTAAA  400

seq1  AGATCCTTCACCTTAATTCCTTCTTCATATGGAAAGCTGAGCACTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTTCACCTTAATTCCTTCTTCATATGGAAAGCTGAGCACTTTAAT  450

seq1  CCTTGCCTCACCTCCATTCTTATGAGAATCAAGGATGAAATCAGTGTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTCACCTCCATTCTTATGAGAATCAAGGATGAAATCAGTGTTGA  500

seq1  GAAACAAAATGAGCAAAATAACAGAGGGATCCTCTGGAAAGGGTGGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAATGAGCAAAATAACAGAGGGATCCTCTGGAAAGGGTGGTAAC  550

seq1  CCAGGTGGTTTGTGTTAAGCAATTATACTCCATTCTAAAATTGTAATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGGTTTGTGTTAAGCAATTATACTCCATTCTAAAATTGTAATCCC  600

seq1  CAACATGGTAACAACATGAACAGTGATTGTAA-TTGCACTTAATTTCCAA  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAACATGGTAACAACATGAACAGTGATTGTAATTTGCACTTAATTTCCAA  650

seq1  GTCATTTCAGCGAATGTTGATGGGCTTCCATGGTTTTCAGAATTCTTATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCAGCGAATGTTGATGGGCTTCCATGGTTTTCAGAATTCTTATC  700

seq1  TCCAACAATGCATTTGTGGACAGATATTATTTGATAAGTTGCCTAAGAGC  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCAACAATGCATTTGTGGACAGATATTATTTGATAAGTTGCCT-AGAGC  749

seq1  CTAAGAAGTTGGATTAGCTATAAATAGAATATGTTGTTCTACCAGAGAAT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAAGAAGTTGGATTAGCTATAAATAGAATATG-TGTTCTACCAGAGAAT  798

seq1  CTGATTTCAGATCACAGTACATATGACAGATATCTAAGAAGTAAATTT-A  848
      |||| ||||||||||||||||||||||||||  |||||| |||||||| |
seq2  CTGA-TTCAGATCACAGTACATATGACAGATTCCTAAGATGTAAATTTAA  847

seq1  AATTTATGACAGCAGTATTATTTGCTCATATGTGTACCTGTATATGTGT  897
      |||||||||||||| |||||||||||| || | | ||||||||||||||
seq2  AATTTATGACAGCA-TATTATTTGCTC-TA-GCGAACCTGTATATGTGT  893