BAC Information

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BAC

Clone NameB6Ng01-038F18
Chromosome7 (Build37)
Map Location 100,764,895 - 100,881,322
singlet/doubletdoublet
Overlap genenone
Upstream geneAnkrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
Downstream geneEG638305, EG545982, EG666816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038F18.bB6Ng01-038F18.g
ACCDH865943DH865944
length1,012769
definitionDH865943|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F18, 5' end.DH865944|Mus musculus domesticus DNA, BAC clone: B6Ng01-038F18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,880,616 - 100,881,322)(100,764,895 - 100,765,663)
sequence
gaattctccactatccttttcatattgctatttgtgtacagtccatattt
cctccttcatctgctaggggattccttcaaacgcagaaccaatgctttgg
tttttgctgatttgtcttcacttgatttgatttatgcaaaaaaatgtatt
gttttccttgtttgctttaggaaaaaaatatcttttctctgactttttaa
gataatcaaaattatttataataaaattttatttttcttaattatttatt
tacttctgtaagttttctttgaaacatattcgggtttatactataaattt
gaaataaaatttattttaaaattgtttaaagtttttgaaatgtatcttct
ggattatgttttaacaactattgtggatatttccaattgacataagaatt
tttgatatttatattatatattgggctttcattttctctgagaagaaaat
tgaatgtttctttttagttttttttaatatattttaaacagtccatttaa
ttaaaaatatgaatgtaaaaaaaggaaaagaattactttcccaacataat
attttcattgattacttggaaattttctgcatttttcctatataaaatgt
tatttatgttgatgaaactttgaggataatgtgtgttctgcatttttgaa
tataatgttgtttatatgtcaattagatcaagttgattgattgtgctgtc
caaataatctatatcctaattgattttctgcttgcttcatttattaacaa
ttgaaaggatgtcttgaattctcacactgacatagtaactttgtctattt
tcccttaagttctgtcactttttgctttgtgtcttcatatctactattgg
cgtcatgaacaagaataattatatattttgaagtactaggtgtttttggt
tacacattagcctttaatattgatatattccttgtttgaaatatgctctg
aatggaatttacctaatgatactaccctttactttctaatcatcatatgt
gaagtggatttt
gaattcagaggcagtttttccagggaaagcaattgagtgagaagcaggga
gaagtcagttttaattagtcagcgttgagagaagattttcgacagaactg
cttagttgaaccagctatccgtaggtcagaatgaactcgaagaatgagct
cattcaacagtaaccctctgagatgacaattacatctagtgaataaaagt
tacttgaatgcctttcaattaccatttttttcttttaaaaatgttatgat
gaagtattgttcaaaatggaaactaagaatgcttgggaatcttgttacaa
attttgggcagactgaacctgtaccctagggtacttagaacaaatgcaga
gatcattgacaggaaaaagaataagctgtcttccctcattaacaagcttt
gttcttgcataagaagagatggggcagtagaattttgaaatacttgtggt
aggtattgcataacttgatatgtttaattaagttttgtatcactaaatac
ataagaaaaagtaagtgagaaaaaaaacaaaatcagatacaacatatatg
caacaacaaaaaaaatgatgttaattattttaaaggtgaggtcatgaaat
ggatggagtcattaaagtgactgtatgtgctcacttgactggtagtcctg
tggccctggctgcagcagatatcctgggacaccctcagaattttgggtct
tcagaggagcactcaagctgttgtactttgtgaagctgttctttggggtt
ggggcgggggttgtggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100880616_100881322
seq2: B6Ng01-038F18.b_40_746 (reverse)

seq1  TTATTTGGACAGCACAATCAATCAACTTGATCTAATTGACATATAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGACAGCACAATCAATCAACTTGATCTAATTGACATATAAACAA  50

seq1  CATTATATTCAAAAATGCAGAACACACATTATCCTCAAAGTTTCATCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATTCAAAAATGCAGAACACACATTATCCTCAAAGTTTCATCAAC  100

seq1  ATAAATAACATTTTATATAGGAAAAATGCAGAAAATTTCCAAGTAATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAACATTTTATATAGGAAAAATGCAGAAAATTTCCAAGTAATCAA  150

seq1  TGAAAATATTATGTTGGGAAAGTAATTCTTTTCCTTTTTTTACATTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATATTATGTTGGGAAAGTAATTCTTTTCCTTTTTTTACATTCATA  200

seq1  TTTTTAATTAAATGGACTGTTTAAAATATATTAAAAAAAACTAAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTAAATGGACTGTTTAAAATATATTAAAAAAAACTAAAAAGAA  250

seq1  ACATTCAATTTTCTTCTCAGAGAAAATGAAAGCCCAATATATAATATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAATTTTCTTCTCAGAGAAAATGAAAGCCCAATATATAATATAAA  300

seq1  TATCAAAAATTCTTATGTCAATTGGAAATATCCACAATAGTTGTTAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAATTCTTATGTCAATTGGAAATATCCACAATAGTTGTTAAAAC  350

seq1  ATAATCCAGAAGATACATTTCAAAAACTTTAAACAATTTTAAAATAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCAGAAGATACATTTCAAAAACTTTAAACAATTTTAAAATAAATT  400

seq1  TTATTTCAAATTTATAGTATAAACCCGAATATGTTTCAAAGAAAACTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCAAATTTATAGTATAAACCCGAATATGTTTCAAAGAAAACTTAC  450

seq1  AGAAGTAAATAAATAATTAAGAAAAATAAAATTTTATTATAAATAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAATAAATAATTAAGAAAAATAAAATTTTATTATAAATAATTTT  500

seq1  GATTATCTTAAAAAGTCAGAGAAAAGATATTTTTTTCCTAAAGCAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTTAAAAAGTCAGAGAAAAGATATTTTTTTCCTAAAGCAAACAA  550

seq1  GGAAAACAATACATTTTTTTGCATAAATCAAATCAAGTGAAGACAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAATACATTTTTTTGCATAAATCAAATCAAGTGAAGACAAATCA  600

seq1  GCAAAAACCAAAGCATTGGTTCTGCGTTTGAAGGAATCCCCTAGCAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACCAAAGCATTGGTTCTGCGTTTGAAGGAATCCCCTAGCAGATG  650

seq1  AAGGAGGAAATATGGACTGTACACAAATAGCAATATGAAAAGGATAGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAAATATGGACTGTACACAAATAGCAATATGAAAAGGATAGTGG  700

seq1  AGAATTC  707
      |||||||
seq2  AGAATTC  707

seq1: chr7_100764895_100765663
seq2: B6Ng01-038F18.g_66_834

seq1  GAATTCAGAGGCAGTTTTTCCAGGGAAAGCAATTGAGTGAGAAGCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGCAGTTTTTCCAGGGAAAGCAATTGAGTGAGAAGCAGGGA  50

seq1  GAAGTCAGTTTTAATTAGTCAGCGTTGAGAGAAGATTTTCGACAGAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGTTTTAATTAGTCAGCGTTGAGAGAAGATTTTCGACAGAACTG  100

seq1  CTTAGTTGAACCAGCTATCCGTAGGTCAGAATGAACTCGAAGAATGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTGAACCAGCTATCCGTAGGTCAGAATGAACTCGAAGAATGAGCT  150

seq1  CATTCAACAGTAACCCTCTGAGATGACAATTACATCTAGTGAATAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACAGTAACCCTCTGAGATGACAATTACATCTAGTGAATAAAAGT  200

seq1  TACTTGAATGCCTTTCAATTACCATTTTTTTCTTTTAAAAATGTTATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAATGCCTTTCAATTACCATTTTTTTCTTTTAAAAATGTTATGAT  250

seq1  GAAGTATTGTTCAAAATGGAAACTAAGAATGCTTGGGAATCTTGTTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATTGTTCAAAATGGAAACTAAGAATGCTTGGGAATCTTGTTACAA  300

seq1  ATTTTGGGCAGACTGAACCTGTACCCTAGGGTACTTAGAACAAATGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGCAGACTGAACCTGTACCCTAGGGTACTTAGAACAAATGCAGA  350

seq1  GATCATTGACAGGAAAAAGAATAAGCTGTCTTCCCTCATTAACAAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGACAGGAAAAAGAATAAGCTGTCTTCCCTCATTAACAAGCTTT  400

seq1  GTTCTTGCATAAGAAGAGATGGGGCAGTAGAATTTTGAAATACTTGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGCATAAGAAGAGATGGGGCAGTAGAATTTTGAAATACTTGTGGT  450

seq1  AGGTATTGCATAACTTGATATGTTTAATTAAGTTTTGTATCACTAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTGCATAACTTGATATGTTTAATTAAGTTTTGTATCACTAAATAC  500

seq1  ATAAGAAAAAGTAAGTGAGAAAAAAAACAAAATCAGATACAACATATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAAAGTAAGTGAGAAAAAAAACAAAATCAGATACAACATATATG  550

seq1  CAACAACAAAAAAAATGATGTTAATTATTTTAAAGGTGAGGTCATGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAAAAAAATGATGTTAATTATTTTAAAGGTGAGGTCATGAAAT  600

seq1  GGATGGAGTCATTAAAGTGACTGTATGTGCTCACTTGACTGGTAGTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGTCATTAAAGTGACTGTATGTGCTCACTTGACTGGTAGTCCTG  650

seq1  TGGCCCTGGCTGCAGCAGATATCCTGGGACACCCTCAGAATTTTGGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGCTGCAGCAGATATCCTGGGACACCCTCAGAATTTTGGGTCT  700

seq1  TCAGAGGAGCACTCAAGCTGTTGTACTTTGTGAAGCTGTTCTTTGGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGAGCACTCAAGCTGTTGTACTTTGTGAAGCTGTTCTTTGGGGTT  750

seq1  GGGGCGGGGGTTGTGGAGG  769
      |||||||||||||||||||
seq2  GGGGCGGGGGTTGTGGAGG  769