BAC Information

Click to search

BAC

Clone NameB6Ng01-038I07
Chromosome7 (Build37)
Map Location 118,649,976 - 118,651,182
singlet/doubletsinglet
Overlap geneGalntl4
Upstream geneSbf2, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658
Downstream geneLOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038I07.bB6Ng01-038I07.g
ACCDH866056DH866057
length1,197829
definitionDH866056|Mus musculus domesticus DNA, BAC clone: B6Ng01-038I07, 5' end.DH866057|Mus musculus domesticus DNA, BAC clone: B6Ng01-038I07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatagagtgccatgtcacagtctacaggccacgagtctcctttc
tagttctaatacatgtttctgatggagaacaaagaacagccaccagaaag
caagctgtcctttaaaggtctccattcatgatctaggctttagctatgca
aagctatgttgaaactcgggcaatggagctggtctacataataaaataca
atagacagctactggtcattgttgccctggcatgaagagtgtccagatga
acaaagttgccagagtttaactccagaagagaacagtgattgaaaagggt
gctttcatatcagtttgtagaagcaggcttttgtgtttaagttgttacct
gcctaaagcatataagtgaggactgtcacatgaccctgtgtataaatgat
gaaaatttccagtgattgttcactatggtcctaataccttatctttttgc
tgggccggccatgttgctgtgacatcactaagtggttagtctttgagcag
ccaatcacactgtctcctcatcacttagcatagcaactcattcattatta
tagaaaagagcaacatttttgatatgttaatgtcttggatactttacata
ttgctaagacaacataagcaatttaaggaggagaagaattgttttggctt
caagtcccaggacacagttcatcatggcagggaaggcatggtggcaggaa
caggaggttgacagctcacatcgtgtcaggaagcaaaagcaaacatgaag
tatgccaggctataaaacctcaaagcctatcccaagtactttcttcctcc
agtatatcttcaccccctaaagtttccagaaccttcccacatagcaccac
tagctgagggtcaagggttcaaaccctaagcctgtgaaggtcacttcaca
ttcagattgtaccatcgtctttaggctaacaaatgtcctatcaaggcata
gtatatgcacagaagatagataaattgtatgtgtacagatcattgcattt
ccatgaagtaagcatgatcatattaaccagaacctgagcagaaaatacct
ccttggttggcctccatttctgtgagttatagtcatgaatctttagcctg
cctcatttgttttttgtattcattctgagtatgatctttctatgaaaaac
ttatgtgatggagaagagtgggccccacacgccatgtatttgatgct
gaattccttggttgcctgtatgtctttgtatggtgttgaaaaatcgtgag
tctttccctgtccagtgtgacatatttactggagtcctccttggtcagct
tatgtttaggtggtcatgttggtgagattttatggggataacttctgtta
ttaccaggagataccatctcacaacaaactccctgatattctggcttttt
gatgttgctttctccctcttcaatgttccctgagccttaggtgtgggagt
gtgctgtagacatatccattgggactgcactccacaactctgcatcgtga
ttggttgttgttttctgtaactgtctctgtttattgcaaagagaagttcc
cttgatgaggactagagttatttgtagctataagggcaaatatctagagt
atagctagggatcatgctagcctagtaaagtggtggtttaggttcccttc
taggattcatgacttcactagccgtgggtagttggtggggtttccagtag
ctagcatggtttccctcttgttgagcagctcttaagtacaattagaggat
tactgatgactgccaaaatatgtgtgccactagtataccgttaaggtcac
cttgcctatttggtcattgttgtggtcaaaggtgtcatagctgggtagac
tatttggttgttttcctttctttgtaagttttgcatagcattctctttta
ccataaaagctagtcctcaagggagcaggcatccagggcagttccagttt
tctcaggccctaagtctgaagagcatggtgttttggaaatggctcttacc
ttgtcctctaggcagtggcaaccaagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_118649976_118651182
seq2: B6Ng01-038I07.b_44_1240 (reverse)

seq1  AGCATTCAAATACATGAGCCTGTGGGGCCCACTCTTCTTCAAATCACCAT  50
      |||| ||||||||||| || |||||||||||||||||| |  |||||   
seq2  AGCA-TCAAATACATG-GCGTGTGGGGCCCACTCTTCTCC--ATCACATA  46

seq1  AGTATTTCATAGAAGATTCATAACTCAGAATAGGATACAGAAAAACAAAT  100
      ||| ||||||||||   |||| ||||||||| | ||||| ||||||||||
seq2  AGTTTTTCATAGAAAGATCAT-ACTCAGAAT-GAATACA-AAAAACAAAT  93

seq1  GA-GCAGCTTACAAGATTCATGACTATAACTCAACAGATATGGAGGCCAA  149
      || ||||  || |||||||||||||||||||| ||||| |||||||||||
seq2  GAGGCAGGCTA-AAGATTCATGACTATAACTC-ACAGAAATGGAGGCCAA  141

seq1  CACAAGGAGGTATTTTCTGCTCCAGGTTCTGGTTAATATGATCATGCTTA  199
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  C-CAAGGAGGTATTTTCTGCT-CAGGTTCTGGTTAATATGATCATGCTTA  189

seq1  CTTCATGGAAATGCAATGATCTGTACACATACAATTTATCTATCTTCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGAAATGCAATGATCTGTACACATACAATTTATCTATCTTCTGT  239

seq1  GCATATACTATGCCTTGATAGGACATTTGTTAGCCTAAAGACGATGGTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACTATGCCTTGATAGGACATTTGTTAGCCTAAAGACGATGGTAC  289

seq1  AATCTGAATGTGAAGTGACCTTCACAGGCTTAGGGTTTGAACCCTTGACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAATGTGAAGTGACCTTCACAGGCTTAGGGTTTGAACCCTTGACC  339

seq1  CTCAGCTAGTGGTGCTATGTGGGAAGGTTCTGGAAACTTTAGGGGGTGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAGTGGTGCTATGTGGGAAGGTTCTGGAAACTTTAGGGGGTGAA  389

seq1  GATATACTGGAGGAAGAAAGTACTTGGGATAGGCTTTGAGGTTTTATAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTGGAGGAAGAAAGTACTTGGGATAGGCTTTGAGGTTTTATAGC  439

seq1  CTGGCATACTTCATGTTTGCTTTTGCTTCCTGACACGATGTGAGCTGTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATACTTCATGTTTGCTTTTGCTTCCTGACACGATGTGAGCTGTCA  489

seq1  ACCTCCTGTTCCTGCCACCATGCCTTCCCTGCCATGATGAACTGTGTCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGTTCCTGCCACCATGCCTTCCCTGCCATGATGAACTGTGTCCT  539

seq1  GGGACTTGAAGCCAAAACAATTCTTCTCCTCCTTAAATTGCTTATGTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTGAAGCCAAAACAATTCTTCTCCTCCTTAAATTGCTTATGTTGT  589

seq1  CTTAGCAATATGTAAAGTATCCAAGACATTAACATATCAAAAATGTTGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAATATGTAAAGTATCCAAGACATTAACATATCAAAAATGTTGCT  639

seq1  CTTTTCTATAATAATGAATGAGTTGCTATGCTAAGTGATGAGGAGACAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTATAATAATGAATGAGTTGCTATGCTAAGTGATGAGGAGACAGT  689

seq1  GTGATTGGCTGCTCAAAGACTAACCACTTAGTGATGTCACAGCAACATGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGGCTGCTCAAAGACTAACCACTTAGTGATGTCACAGCAACATGG  739

seq1  CCGGCCCAGCAAAAAGATAAGGTATTAGGACCATAGTGAACAATCACTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCCAGCAAAAAGATAAGGTATTAGGACCATAGTGAACAATCACTGG  789

seq1  AAATTTTCATCATTTATACACAGGGTCATGTGACAGTCCTCACTTATATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCATCATTTATACACAGGGTCATGTGACAGTCCTCACTTATATG  839

seq1  CTTTAGGCAGGTAACAACTTAAACACAAAAGCCTGCTTCTACAAACTGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGCAGGTAACAACTTAAACACAAAAGCCTGCTTCTACAAACTGAT  889

seq1  ATGAAAGCACCCTTTTCAATCACTGTTCTCTTCTGGAGTTAAACTCTGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCACCCTTTTCAATCACTGTTCTCTTCTGGAGTTAAACTCTGGC  939

seq1  AACTTTGTTCATCTGGACACTCTTCATGCCAGGGCAACAATGACCAGTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTTCATCTGGACACTCTTCATGCCAGGGCAACAATGACCAGTAG  989

seq1  CTGTCTATTGTATTTTATTATGTAGACCAGCTCCATTGCCCGAGTTTCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATTGTATTTTATTATGTAGACCAGCTCCATTGCCCGAGTTTCAA  1039

seq1  CATAGCTTTGCATAGCTAAAGCCTAGATCATGAATGGAGACCTTTAAAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTTTGCATAGCTAAAGCCTAGATCATGAATGGAGACCTTTAAAGG  1089

seq1  ACAGCTTGCTTTCTGGTGGCTGTTCTTTGTTCTCCATCAGAAACATGTAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGCTTTCTGGTGGCTGTTCTTTGTTCTCCATCAGAAACATGTAT  1139

seq1  TAGAACTAGAAAGGAGACTCGTGGCCTGTAGACTGTGACATGGCACTCTA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTAGAAAGGAGACTCGTGGCCTGTAGACTGTGACATGGCACTCTA  1189

seq1  TGGAATTC  1207
      ||||||||
seq2  TGGAATTC  1197