BAC Information

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BAC

Clone NameB6Ng01-038O07
Chromosome7 (Build37)
Map Location 24,915,290 - 25,076,352
singlet/doubletdoublet
Overlap geneZfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61
Upstream geneLOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112
Downstream geneLOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038O07.bB6Ng01-038O07.g
ACCDH866318DH866319
length794332
definitionDH866318|Mus musculus domesticus DNA, BAC clone: B6Ng01-038O07, 5' end.DH866319|Mus musculus domesticus DNA, BAC clone: B6Ng01-038O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,915,290 - 24,916,073)(25,076,021 - 25,076,352)
sequence
gaattcactgtgtaaaccagtctgggctcaaattcacagattcctccatc
ctctgcctcccgagtgctgggatcaaaagccagtcctgactgctcagctt
gcctttttatatacctgcggaccatttgcccagggctggcaccgtttaca
gtgagttgggcccctcccacatcaaccactaataatgaaaatgcttcata
aacttgcatacagcccagtctcatggaggcatctcctcagctgaggctcc
ctcttccctgcaagttgacaaatcacaggtaactttagcccaaggggatc
tggcatccacttgtagcccacaagggcacctgtacccacagacacagaca
gatagacagacagacagacacacacacacacactgaacctgtttaagaag
gattgaatgggtgtataacagtggagtaaacacagtccatactcttgtct
ctgacacagtattctagacttaggtcaataacctgagctacaagctagag
cagatcctgagactccatggtaaatggacatggttttgttatgttttagg
gagggagatggaacaagagagtagcactgagttgaactgtcctccaagca
agaagctgacatgtggctgcagcatggttggctcagaagtggattgtcaa
ctcgctgagacaaagtaagccgtcttcctgtaatatgtcatttactttat
ttatgtatttatttattaatttgtgtttgcatgcctctgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgcgggggg
aaatctccaagtccacttgagagtccacacgggggagaagccgtacagtt
gtgacgtgtgtgggaaaggcttcagtcgctcttcacagctacagtcccat
cagagagtccacacgggggagaagccttacaagtgtgatgtgtgtggtaa
gagctttggttggcggtcaaatcttataattcatcacagaatccacagca
gtggtaaaccttacaagagcaagagagatgataaaaacatcaaggagtcc
actcaggaaaaatgttctataaaatagtgcttgaaaagactcgtatcatg
tggattctttgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_24915290_24916073
seq2: B6Ng01-038O07.b_47_830

seq1  GAATTCACTGTGTAAACCAGTCTGGGCTCAAATTCACAGATTCCTCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTAAACCAGTCTGGGCTCAAATTCACAGATTCCTCCATC  50

seq1  CTCTGCCTCCCGAGTGCTGGGATCAAAAGCCAGTCCTGACTGCTCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCCGAGTGCTGGGATCAAAAGCCAGTCCTGACTGCTCAGCTT  100

seq1  GCCTTTTTATATACCTGCGGACCATTTGCCCAGGGCTGGCACCGTTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTATATACCTGCGGACCATTTGCCCAGGGCTGGCACCGTTTACA  150

seq1  GTGAGTTGGGCCCCTCCCACATCAACCACTAATAATGAAAATGCTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTGGGCCCCTCCCACATCAACCACTAATAATGAAAATGCTTCATA  200

seq1  AACTTGCATACAGCCCAGTCTCATGGAGGCATCTCCTCAGCTGAGGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCATACAGCCCAGTCTCATGGAGGCATCTCCTCAGCTGAGGCTCC  250

seq1  CTCTTCCCTGCAAGTTGACAAATCACAGGTAACTTTAGCCCAAGGGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCTGCAAGTTGACAAATCACAGGTAACTTTAGCCCAAGGGGATC  300

seq1  TGGCATCCACTTGTAGCCCACAAGGGCACCTGTACCCACAGACACAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCACTTGTAGCCCACAAGGGCACCTGTACCCACAGACACAGACA  350

seq1  GATAGACAGACAGACAGACACACACACACACACTGAACCTGTTTAAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACAGACAGACAGACACACACACACACACTGAACCTGTTTAAGAAG  400

seq1  GATTGAATGGGTGTATAACAGTGGAGTAAACACAGTCCATACTCTTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAATGGGTGTATAACAGTGGAGTAAACACAGTCCATACTCTTGTCT  450

seq1  CTGACACAGTATTCTAGACTTAGGTCAATAACCTGAGCTACAAGCTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACAGTATTCTAGACTTAGGTCAATAACCTGAGCTACAAGCTAGAG  500

seq1  CAGATCCTGAGACTCCATGGTAAATGGACATGGTTTTGTTATGTTTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTGAGACTCCATGGTAAATGGACATGGTTTTGTTATGTTTTAGG  550

seq1  GAGGGAGATGGAACAAGAGAGTAGCACTGAGTTGAACTGTCCTCCAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGATGGAACAAGAGAGTAGCACTGAGTTGAACTGTCCTCCAAGCA  600

seq1  AGAAGCTGACATGTGGCTGCAGCATGGTTGGCTCAGAAGTGGATTGTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGACATGTGGCTGCAGCATGGTTGGCTCAGAAGTGGATTGTCAA  650

seq1  CTCGCTGAGACAAAGTAAGCCGTCTTCCTGTAATATGTCATTTACTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTGAGACAAAGTAAGCCGTCTTCCTGTAATATGTCATTTACTTTAT  700

seq1  TTATGTATTTATTTATTAATTTGTGTTTGCATGCCTCTGTGTGTGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATTTATTTATTAATTTGTGTTTGCATGCCTCTGTGTGTGTGTGT  750

seq1  GTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGT  784
      ||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGT  784

seq1: chr7_25076021_25076352
seq2: B6Ng01-038O07.g_76_407 (reverse)

seq1  ACACACACACACACACACACACAAAGAATCCACATGATACGAGTCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAAAGAATCCACATGATACGAGTCTTTTC  50

seq1  AAGCACTATTTTATAGAACATTTTTCCTGAGTGGACTCCTTGATGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTATTTTATAGAACATTTTTCCTGAGTGGACTCCTTGATGTTTTT  100

seq1  ATCATCTCTCTTGCTCTTGTAAGGTTTACCACTGCTGTGGATTCTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTCTCTTGCTCTTGTAAGGTTTACCACTGCTGTGGATTCTGTGAT  150

seq1  GAATTATAAGATTTGACCGCCAACCAAAGCTCTTACCACACACATCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATAAGATTTGACCGCCAACCAAAGCTCTTACCACACACATCACAC  200

seq1  TTGTAAGGCTTCTCCCCCGTGTGGACTCTCTGATGGGACTGTAGCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGCTTCTCCCCCGTGTGGACTCTCTGATGGGACTGTAGCTGTGA  250

seq1  AGAGCGACTGAAGCCTTTCCCACACACGTCACAACTGTACGGCTTCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGACTGAAGCCTTTCCCACACACGTCACAACTGTACGGCTTCTCCC  300

seq1  CCGTGTGGACTCTCAAGTGGACTTGGAGATTT  332
      ||||||||||||||||||||||||||||||||
seq2  CCGTGTGGACTCTCAAGTGGACTTGGAGATTT  332