BAC Information

Click to search

BAC

Clone NameB6Ng01-038P05
Chromosome7 (Build37)
Map Location 141,029,639 - 141,162,494
singlet/doubletdoublet
Overlap geneFank1, Adam12
Upstream gene2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2, LOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695
Downstream geneA130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750, Dock1, B830028B13Rik, EG668693
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038P05.bB6Ng01-038P05.g
ACCDH866362DH866363
length1,1151,133
definitionDH866362|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P05, 5' end.DH866363|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,029,639 - 141,030,761)(141,161,346 - 141,162,494)
sequence
gaattctttgtatatttggggtatgtcttccagcaaatatgttttgcact
tcttaatcggcaatgtgtccatttcattcttactttggacaggaattttt
gcagagtttatagttgtaggctgacagttttttttccctttagtttgaat
gtattcctgcacgctgctcaggttcccattggcatccctgggaacctgga
tgtcacctgacagtcttctgtcagtgctacccgcttcctctctgaaggcg
tggcgagcctaccattgccttcatcctctctaaaggtgtggggagcctac
cattgccttcgtcctctctgaaggcgtggggagcctaccattgccttcgt
cctctctgaaggcgtggggagcctaccattgccttcgtcctctctgaagg
cgtggggagcctaccattgccttcatcctctctgaaggcgtggcgagcct
accattgccttcgatgctcttcgggctcatttcggcacgtctaggtgcat
tttacttcctagggttaggtactaatgttctgtgaggagcagaggaagcc
ctgactgaatgtgttgtgatagtgggcatggccgtgaccacatcaaggac
ttcatagtctaaaacccatgggaaaatggtaaagcctgtccctaccccaa
gcctcagaggcatgacaaagccctcccttctgtctcagtgtggaggttga
tgtgtgtgcagaacatgtccactgcagctttctctcctcagatatttatg
accagactccactgctcctacagagattagctaaacctgcccttgactca
gctgcacgccatgagcccacctccttgcttaccagtgtgcaataacccac
atccttgtccaagtgtacacaatagccctgccctcctattctgctctata
tgaggaatgtgctgtgctcccagggtgctgaggcctctctatcagagaac
ccagtctacccaactccagcttttccctgtgtgtcttttttcattccctt
gctatccctggtcagctccatccctggaagtgtgcaaagaatgacactct
tcatctcttaataagctgtgatctacttcttgctattcatctttctccat
tctgttatcaccttt
gaattctacctccctcatttcttatccgttccttccggaaagctttgacc
ccctccaccaccaacattctctggacttcctgttggtgctattgctcagt
gggatagcatatcagttaactggattcatgggagcatgccccgtgcccta
aagccttgtgctaacctctgagcagctgagccagggtgaggccatcctaa
tctttatttgttctgctcgtaccacattcctgcacacagcgagaactgac
agcaaatatttgtggctgttgcatatataggacaatcactcatgtgggtc
tctgactgtgtctacatacattctgggatctctgagccaggcaggcatct
gccaggctccatttgacctatataggcctgtgaggttttctggaagtctg
gagtcacagtactcataatgtgagtggcagttttaattattcagatcatg
acatcagagtcagtctgtctgtgtaccagcctagccatgcagttacaatc
ctgaataatttacctggctcctccgagcctcagcgtctcgacactaaaat
gggagcagtaacaatttctaactcatagaactgcttcgtggactaaacca
gggtttggaaagcaccttggcaccaagccctagttgtacttgtgctcatt
aaacttaactaaaaagaaccaagatgacctgtgggcaaatgaaggaagaa
cattcagtgaagatagtaaagaagagtgactaaaggcaaagcacacatgg
aagttaaccaacagtaccaactatagagaggaattgactaagcctgaagt
ctgggctaggatgtggtttgagaggctcacagaggaacacaacctctcca
ttggtatgaacagcctccctcttcggatgttgctaagttagtgctgagaa
agatgataggtaggcctgggaggacttagttcctgctccattcgatactc
ctgggtggacacagagaaacagtgtcgtttctcagaagacaatcctcaag
cctttcaggatatctggccctagggacctccttagaaagtggcataaaca
tgagcatgaatatttgtttctgattattgtgacttgtatgaaccgctggg
aatcactctggaggggcgacctgatttgagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141029639_141030761
seq2: B6Ng01-038P05.b_46_1160

seq1  GAATTCTTTGTATATTTGGGGTATGTCTTCCAGCAAATATGTTTTGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATATTTGGGGTATGTCTTCCAGCAAATATGTTTTGCACT  50

seq1  TCTTAATCGGCAATGTGTCCATTTCATTCTTACTTTGGACAGGAATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATCGGCAATGTGTCCATTTCATTCTTACTTTGGACAGGAATTTTT  100

seq1  GCAGAGTTTATAGTTGTAGGCTGACAGTTTTTTTTCCCTTTAGTTTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTTTATAGTTGTAGGCTGACAGTTTTTTTTCCCTTTAGTTTGAAT  150

seq1  GTATTCCTGCACGCTGCTCAGGTTCCCATTGGCATCCCTGGGAACCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCTGCACGCTGCTCAGGTTCCCATTGGCATCCCTGGGAACCTGGA  200

seq1  TGTCACCTGACAGTCTTCTGTCAGTGCTACCCGCTTCCTCTCTGAAGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTGACAGTCTTCTGTCAGTGCTACCCGCTTCCTCTCTGAAGGCG  250

seq1  TGGCGAGCCTACCATTGCCTTCATCCTCTCTAAAGGTGTGGGGAGCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGAGCCTACCATTGCCTTCATCCTCTCTAAAGGTGTGGGGAGCCTAC  300

seq1  CATTGCCTTCGTCCTCTCTGAAGGCGTGGGGAGCCTACCATTGCCTTCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTCGTCCTCTCTGAAGGCGTGGGGAGCCTACCATTGCCTTCGT  350

seq1  CCTCTCTGAAGGCGTGGGGAGCCTACCATTGCCTTCGTCCTCTCTGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGAAGGCGTGGGGAGCCTACCATTGCCTTCGTCCTCTCTGAAGG  400

seq1  CGTGGGGAGCCTACCATTGCCTTCATCCTCTCTGAAGGCGTGGCGAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGGAGCCTACCATTGCCTTCATCCTCTCTGAAGGCGTGGCGAGCCT  450

seq1  ACCATTGCCTTCGATGCTCTTCGGGCTCATTTCGGCACGTCTAGGTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGCCTTCGATGCTCTTCGGGCTCATTTCGGCACGTCTAGGTGCAT  500

seq1  TTTACTTCCTAGGGTTAGGTACTAATGTTCTGTGAGGAGCAGAGGAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCCTAGGGTTAGGTACTAATGTTCTGTGAGGAGCAGAGGAAGCC  550

seq1  CTGACTGAATGTGTTGTGATAGTGGGCATGGCCGTGACCACATCAAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAATGTGTTGTGATAGTGGGCATGGCCGTGACCACATCAAGGAC  600

seq1  TTCATAGTCTAAAACCCATGGGAAAATGGTAAAGCCTGTCCCTACCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTCTAAAACCCATGGGAAAATGGTAAAGCCTGTCCCTACCCCAA  650

seq1  GCCTCAGAGGCATGACAAAGCCCTCCCTTCTGTCTCAGTGTGGAGGTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAGGCATGACAAAGCCCTCCCTTCTGTCTCAGTGTGGAGGTTGA  700

seq1  TGTGTGTGCAGAACATGTCCACTGCAGCTTTCTCTCCTCAGATATTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCAGAACATGTCCACTGCAGCTTTCTCTCCTCAGATATTTATG  750

seq1  ACCAGACTCCACTGCTCCTACAGAGATTAGCTAAACCTGCCCTTGACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTCCACTGCTCCTACAGAGATTAGCTAAACCTGCCCTTGACTCA  800

seq1  GCTGCACGCCATGAGCCCACCTCCTTGCTTACCAGTGTGCAATAACCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACGCCATGAGCCCACCTCCTTGCTTACCAGTGTGCAATAACCCAC  850

seq1  ATCCTTGTCCAAGTGTACACAATAGCCCTGCCCTCCTATTCTGCTCTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTCCAAGTGTACACAATAGCCCTGCCCTCCTATTCTGCTCTATA  900

seq1  TGAGGAATGTGCTGTGCTCCCAGGGTGCTGAGGCCTCTCTATCAGAGAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATGTGCTGTGCTCCCAGGGTGCTGAGGCCTCTCTATCAGAGAAC  950

seq1  CCAGTCTACCCAACTCCAGCTTTTCTCTGTGTGTCTTTTCTTCATTCCCT  1000
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CCAGTCTACCCAACTCCAGCTTTTCCCTGTGTGTCTTTT-TTCATTCCCT  999

seq1  TGCTATCCCTGGTCAGCTCCATCCCTGGAAGTGTGCAAAGACATGACACT  1050
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCTATCCCTGGTCAGCTCCATCCCTGGAAGTGTGCAAAGA-ATGACACT  1048

seq1  CTTCATCTCTTAATTAGCTGTGATCTACTTTCCTTTGCTATTTCATCTGT  1100
      |||||||||||||| |||||||||||||||    |||||| ||||||| |
seq2  CTTCATCTCTTAATAAGCTGTGATCTACTT---CTTGCTA-TTCATCTTT  1094

seq1  CTTCCATTCTTGTTATCACCTTT  1123
      | ||||||| |||||||||||||
seq2  C-TCCATTC-TGTTATCACCTTT  1115

seq1: chr7_141161346_141162494
seq2: B6Ng01-038P05.g_70_1202 (reverse)

seq1  CTTCTCAAATCAGGGTCGCCCCTCAAGATGACATTCCCAGCTGTGTCATA  50
      |||||||||||| ||||||||||| ||| |  ||||||||| || ||  |
seq2  CTTCTCAAATCA-GGTCGCCCCTCCAGA-GTGATTCCCAGCGGT-TC--A  45

seq1  TACAAAGGTCACAATAATCAGAAAACAAATATTCAATGCTCATGTTTATG  100
      |||||  |||||||||||||| |||||||||||| |||||||||||||||
seq2  TACAA--GTCACAATAATCAG-AAACAAATATTC-ATGCTCATGTTTATG  91

seq1  CCAACTTTCTAAGAGAGTCCCTAGGGCCAGATATCCTGAAAGGCCTTGAG  150
      || ||||||||||   ||||||||||||||||||||||||||| ||||||
seq2  CC-ACTTTCTAAGGAGGTCCCTAGGGCCAGATATCCTGAAAGG-CTTGAG  139

seq1  GATTGTCTTCTGAGAAACGGACACTGTTTCTCTGTGTCCACCCAGGAGTA  200
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GATTGTCTTCTGAGAAAC-GACACTGTTTCTCTGTGTCCACCCAGGAGTA  188

seq1  TCGAATGGAAGCAGGAACTAAGGTCCTCCCAGGCCTAACCTATCATCTTT  250
      |||||||| |||||||||||| |||||||||||||| |||||||||||||
seq2  TCGAATGG-AGCAGGAACTAA-GTCCTCCCAGGCCT-ACCTATCATCTTT  235

seq1  CTCAGCACTAACTTAGCAACATTCCGAAGAGGGAGGCTGTTCATACCAAT  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCAGCACTAACTTAGCAACA-TCCGAAGAGGGAGGCTGTTCATACCAAT  284

seq1  GGAGAGGTTGTGTTCCTCTGTGAGCCTCTCAAACCACATCCTAGCCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGTTGTGTTCCTCTGTGAGCCTCTCAAACCACATCCTAGCCCAGA  334

seq1  CTTCAGGCTTAGTCAATTCCTCTCTATAGTTGGTACTGTTGGTTAACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGCTTAGTCAATTCCTCTCTATAGTTGGTACTGTTGGTTAACTTC  384

seq1  CATGTGTGCTTTGCCTTTAGTCACTCTTCTTTACTATCTTCACTGAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGCTTTGCCTTTAGTCACTCTTCTTTACTATCTTCACTGAATGT  434

seq1  TCTTCCTTCATTTGCCCACAGGTCATCTTGGTTCTTTTTAGTTAAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCATTTGCCCACAGGTCATCTTGGTTCTTTTTAGTTAAGTTTA  484

seq1  ATGAGCACAAGTACAACTAGGGCTTGGTGCCAAGGTGCTTTCCAAACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACAAGTACAACTAGGGCTTGGTGCCAAGGTGCTTTCCAAACCCT  534

seq1  GGTTTAGTCCACGAAGCAGTTCTATGAGTTAGAAATTGTTACTGCTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTCCACGAAGCAGTTCTATGAGTTAGAAATTGTTACTGCTCCCA  584

seq1  TTTTAGTGTCGAGACGCTGAGGCTCGGAGGAGCCAGGTAAATTATTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGTCGAGACGCTGAGGCTCGGAGGAGCCAGGTAAATTATTCAGG  634

seq1  ATTGTAACTGCATGGCTAGGCTGGTACACAGACAGACTGACTCTGATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAACTGCATGGCTAGGCTGGTACACAGACAGACTGACTCTGATGTC  684

seq1  ATGATCTGAATAATTAAAACTGCCACTCACATTATGAGTACTGTGACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTGAATAATTAAAACTGCCACTCACATTATGAGTACTGTGACTCC  734

seq1  AGACTTCCAGAAAACCTCACAGGCCTATATAGGTCAAATGGAGCCTGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCCAGAAAACCTCACAGGCCTATATAGGTCAAATGGAGCCTGGCA  784

seq1  GATGCCTGCCTGGCTCAGAGATCCCAGAATGTATGTAGACACAGTCAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTGCCTGGCTCAGAGATCCCAGAATGTATGTAGACACAGTCAGAG  834

seq1  ACCCACATGAGTGATTGTCCTATATATGCAACAGCCACAAATATTTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATGAGTGATTGTCCTATATATGCAACAGCCACAAATATTTGCTG  884

seq1  TCAGTTCTCGCTGTGTGCAGGAATGTGGTACGAGCAGAACAAATAAAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTCGCTGTGTGCAGGAATGTGGTACGAGCAGAACAAATAAAGAT  934

seq1  TAGGATGGCCTCACCCTGGCTCAGCTGCTCAGAGGTTAGCACAAGGCTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGGCCTCACCCTGGCTCAGCTGCTCAGAGGTTAGCACAAGGCTTT  984

seq1  AGGGCACGGGGCATGCTCCCATGAATCCAGTTAACTGATATGCTATCCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACGGGGCATGCTCCCATGAATCCAGTTAACTGATATGCTATCCCA  1034

seq1  CTGAGCAATAGCACCAACAGGAAGTCCAGAGAATGTTGGTGGTGGAGGGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAATAGCACCAACAGGAAGTCCAGAGAATGTTGGTGGTGGAGGGG  1084

seq1  GTCAAAGCTTTCCGGAAGGAACGGATAAGAAATGAGGGAGGTAGAATTC  1149
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGCTTTCCGGAAGGAACGGATAAGAAATGAGGGAGGTAGAATTC  1133