BAC Information

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BAC

Clone NameB6Ng01-041A05
Chromosome7 (Build37)
Map Location 69,221,735 - 69,240,212
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
Downstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041A05.bB6Ng01-041A05.g
ACCDH867800DH867801
length975993
definitionDH867800|Mus musculus domesticus DNA, BAC clone: B6Ng01-041A05, 5' end.DH867801|Mus musculus domesticus DNA, BAC clone: B6Ng01-041A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,221,735 - 69,222,706)(69,239,212 - 69,240,212)
sequence
gaattctcagggaccaaaatgaacatgaccgctgtgggtctcaacgtgga
tgtgtagacccattttgggatgaatgaaccttttacagaattcacctgag
aatattaaaagacacagatatttaaatcacaattcataactgtagcaaca
ttaaagtctaaagaatcaataaaataattttaaggttgaggggcaagact
atgtggtattttattaaaccattgccaaattagaaaggttaagaaccact
gacaatacatgcagtagtcacaaatgatatttaataaattcagtgaaaat
ggtttatgatttcaaaagatcactcagagtaattaactgcattaatatgt
atgacttatcttactgtagtgactgacagaaacagatgcagataagcaga
cattatatactaagtgaaaatgacaagtctaaacaacctactctgaaaag
aaacatacaagaaatattacacagaatgaacagattttatgtaaataaat
atatatacatatatatatatatgtacatacatatatatatatgtatatgc
atgctgtataaattagcaaaaagggggagcaagaatataaaagagagtat
gaatgtgtatacagaaggaaggatacggagagaaagaaaatgatgcattt
tacaaacaaatcataatatcaagaatcaagaaatataaaagaaaaaggat
actttgaaagaaatgttctttctaggggtctatgggcttgttctttcttt
cattggatttaaaaataatagaaggtacagaagaagaagaaaacaagtat
atttagccacaaacctgcagcaatacacacctgggtttgacatatatact
ctgtgagaatttttaatgatagtaagatagaaataaaggaaggatgtcac
tgttagagttcctaatctctaagaatgttattgatatcaggtaagagaat
gtcaggaaagatagcatctgaaaaa
gaattcttaattgtctgcttatgctggcatctccaagggcattgaaatca
atgtccagaaatcacatggctacagaaagagtaaaattgttcttccttag
agaatccaagatgaaaggcatggatatattggtcaaaaagttatcaccca
tgtcataacacatagttgaaaccctgtgcctccactttcatgtgagctac
atatgctttgaagtatatgacctctgattaatcatcatgtttcaggagga
ggagactacaacatgagcaggctgtactcttggtttgagaatacatgttc
tgatcttcccagggacttgaactcagccttaccacttcagggcccctcat
ttatctagattgtatctataatgctctctgctagtgttgtgaaagaaaaa
cttcttcaagatgatgggggataatggaaagagctgtcacaaaaattaac
tgtagagcctggtgatgagtcacaattgcaggatattttacctggtggtt
ttccttggtaagagagtggggtgttcattgtagaggcctggttataaggg
gtgcattagatacagcactaagttgaggtcaccaagacagagggtgtaag
ttagggaaaacatttaatgatgttcttctctgtggtgttcattgacagac
atttgtgatggataccttaccagtttctccctcagaatgccacagcagca
accaaagcatcaccaagaagctgtaaaaggtaatatgactacacatgtgg
ttttttgagaaatgtgtctaatggcgcagtccagccaggagagatacttc
tgatctaaggtaagaaaaatagcaaaaatgtgtggggctgacaacatgat
actgagttttaatgtttcagtatactagagaaaaaatgaggaacataaat
ttactttactgggctggtgaatggctcatgggtagagtaccactgctctt
ccaaaggtccagtgttcagccctgaaatacatgtggctcataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_69221735_69222706
seq2: B6Ng01-041A05.b_39_1013

seq1  GAATTCTCAGGGACCAAAATGAACATGA-GGCTGTGGGTCTCAACGTGGA  49
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GAATTCTCAGGGACCAAAATGAACATGACCGCTGTGGGTCTCAACGTGGA  50

seq1  TGTGTAGACCCATTTTGGGATGAATGAACCTTTTACAGAATTCACCTGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGACCCATTTTGGGATGAATGAACCTTTTACAGAATTCACCTGAG  100

seq1  AATATTAAAAGACACAGATATTTAAATCACAATTCATAACTGTAGCAACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAAAGACACAGATATTTAAATCACAATTCATAACTGTAGCAACA  150

seq1  TTAAAGTCTAAAGAATCAATAAAATAATTTTAAGGTTGAGGGGCAAGACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTAAAGAATCAATAAAATAATTTTAAGGTTGAGGGGCAAGACT  200

seq1  ATGTGGTATTTTATTAAACCATTGCCAAATTAGAAAGGTTAAGAACCACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTATTTTATTAAACCATTGCCAAATTAGAAAGGTTAAGAACCACT  250

seq1  GACAATACATGCAGTAGTCACAAATGATATTTAATAAATTCAGTGAAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATACATGCAGTAGTCACAAATGATATTTAATAAATTCAGTGAAAAT  300

seq1  GGTTTATGATTTCAAAAGATCACTCAGAGTAATTAACTGCATTAATATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATGATTTCAAAAGATCACTCAGAGTAATTAACTGCATTAATATGT  350

seq1  ATGACTTATCTTACTGTAGTGACTGACAGAAACAGATGCAGATAAGCAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTATCTTACTGTAGTGACTGACAGAAACAGATGCAGATAAGCAGA  400

seq1  CATTATATACTAAGTGAAAATGACAAGTCTAAACAACCTACTCTGAAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATACTAAGTGAAAATGACAAGTCTAAACAACCTACTCTGAAAAG  450

seq1  AAACATACAAGAAATATTACACAGAATGAACAGATTTTATGTAAATAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACAAGAAATATTACACAGAATGAACAGATTTTATGTAAATAAAT  500

seq1  ATATATACATATATATATATATGTACATACATATATATATATGTATATGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATATATATATATATGTACATACATATATATATATGTATATGC  550

seq1  ATGCTGTATAAATTAGCAAAAAGGGGGAGCAAGAATATAAAAGAGAGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTATAAATTAGCAAAAAGGGGGAGCAAGAATATAAAAGAGAGTAT  600

seq1  GAATGTGTATACAGAAGGAAGGATACGGAGAGAAAGAAAATGATGCATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTATACAGAAGGAAGGATACGGAGAGAAAGAAAATGATGCATTT  650

seq1  TACAAACAAATCATAATATCAAGAATCAAGAAATATAAAAGAAAAAGGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAAATCATAATATCAAGAATCAAGAAATATAAAAGAAAAAGGAT  700

seq1  ACTTTGAAAGAAATGTTCTTTCTAGGGGTCTATGGGCTTGTTCTTTCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAAGAAATGTTCTTTCTAGGGGTCTATGGGCTTGTTCTTTCTTT  750

seq1  CATTGGATTT-AAAATAATAGAAGGTACAGAAGAAGAAG-AAACAAGTAT  797
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  CATTGGATTTAAAAATAATAGAAGGTACAGAAGAAGAAGAAAACAAGTAT  800

seq1  A-TTAGCCACAAACCTGCAGCAATACACACCT-GGTTTGACATATATACT  845
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTTAGCCACAAACCTGCAGCAATACACACCTGGGTTTGACATATATACT  850

seq1  CTGTGAGAATTTTTAATGATAGTAAGATAGAAATAAAGGAA-GATGTCAC  894
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGTGAGAATTTTTAATGATAGTAAGATAGAAATAAAGGAAGGATGTCAC  900

seq1  TGTTAGAGTTCCTTAATCTCTAAGAATGTTATTGAGTATCAGGTAAGAGA  944
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  TGTTAGAGTTCC-TAATCTCTAAGAATGTTATTGA-TATCAGGTAAGAGA  948

seq1  ATGTCAGGAAAAGATAGCATCTGAAAAA  972
      |||||||| |||||||||||||||||||
seq2  ATGTCAGG-AAAGATAGCATCTGAAAAA  975

seq1: chr7_69239212_69240212
seq2: B6Ng01-041A05.g_71_1063 (reverse)

seq1  TTATGAGCCACCATGTAGTTTCCAGGGCTTGAACACTGGACCTTTGGAAG  50
      |||||||||| ||||||  || |||||| |||||||||||||||||||||
seq2  TTATGAGCCA-CATGTA--TTTCAGGGC-TGAACACTGGACCTTTGGAAG  46

seq1  AGCAGTTGGGTACTCTACCCACTGAGCCATTTCACCAGCCCAGTAAAGTA  100
      ||||||  ||||||||||||| ||||||| ||||||||||||||||||||
seq2  AGCAGT--GGTACTCTACCCA-TGAGCCA-TTCACCAGCCCAGTAAAGTA  92

seq1  ATTTTTATGTTCCTCATTTTTTCTCTAGTATACCTGAAACATTAAAACTC  150
      |  ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  A-ATTTATGTTCCTCATTTTTTCTCTAGTATA-CTGAAACATTAAAACTC  140

seq1  AGTATCATGTTGTCAGCCCCACACATTTTTGCTATTTTTCTTACCTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCATGTTGTCAGCCCCACACATTTTTGCTATTTTTCTTACCTTAGA  190

seq1  TCAGAAGTATCTCTCCTGGCTGGACTGCGCCATTAGACACATTTCTC-AA  249
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCAGAAGTATCTCTCCTGGCTGGACTGCGCCATTAGACACATTTCTCAAA  240

seq1  TAACCACATGTGTAGTCATATTACC-TTTACAGCTTCTTGGTGATGCTTT  298
       |||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAACCACATGTGTAGTCATATTACCTTTTACAGCTTCTTGGTGATGCTTT  290

seq1  GGTTGCTGCTGTGGCATTCTGAGGGAGAAACTGGTAAGGTATCCATCACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGCTGTGGCATTCTGAGGGAGAAACTGGTAAGGTATCCATCACA  340

seq1  AATGTCTGTCAATGAACACCACAGAGAAGAACATCATTAAATGTTTTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGTCAATGAACACCACAGAGAAGAACATCATTAAATGTTTTCCC  390

seq1  TAACTTACACCCTCTGTCTTGGTGACCTCAACTTAGTGCTGTATCTAATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTACACCCTCTGTCTTGGTGACCTCAACTTAGTGCTGTATCTAATG  440

seq1  CACCCCTTATAACCAGGCCTCTACAATGAACACCCCACTCTCTTACCAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTATAACCAGGCCTCTACAATGAACACCCCACTCTCTTACCAAG  490

seq1  GAAAACCACCAGGTAAAATATCCTGCAATTGTGACTCATCACCAGGCTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCACCAGGTAAAATATCCTGCAATTGTGACTCATCACCAGGCTCT  540

seq1  ACAGTTAATTTTTGTGACAGCTCTTTCCATTATCCCCCATCATCTTGAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAATTTTTGTGACAGCTCTTTCCATTATCCCCCATCATCTTGAAG  590

seq1  AAGTTTTTCTTTCACAACACTAGCAGAGAGCATTATAGATACAATCTAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTCTTTCACAACACTAGCAGAGAGCATTATAGATACAATCTAGA  640

seq1  TAAATGAGGGGCCCTGAAGTGGTAAGGCTGAGTTCAAGTCCCTGGGAAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGGGGCCCTGAAGTGGTAAGGCTGAGTTCAAGTCCCTGGGAAGA  690

seq1  TCAGAACATGTATTCTCAAACCAAGAGTACAGCCTGCTCATGTTGTAGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATGTATTCTCAAACCAAGAGTACAGCCTGCTCATGTTGTAGTC  740

seq1  TCCTCCTCCTGAAACATGATGATTAATCAGAGGTCATATACTTCAAAGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTGAAACATGATGATTAATCAGAGGTCATATACTTCAAAGCA  790

seq1  TATGTAGCTCACATGAAAGTGGAGGCACAGGGTTTCAACTATGTGTTATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCTCACATGAAAGTGGAGGCACAGGGTTTCAACTATGTGTTATG  840

seq1  ACATGGGTGATAACTTTTTGACCAATATATCCATGCCTTTCATCTTGGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGTGATAACTTTTTGACCAATATATCCATGCCTTTCATCTTGGAT  890

seq1  TCTCTAAGGAAGAACAATTTTACTCTTTCTGTAGCCATGTGATTTCTGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAGGAAGAACAATTTTACTCTTTCTGTAGCCATGTGATTTCTGGA  940

seq1  CATTGATTTCAATGCCCTTGGAGATGCCAGCATAAGCAGACAATTAAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTTCAATGCCCTTGGAGATGCCAGCATAAGCAGACAATTAAGAA  990

seq1  TTC  1001
      |||
seq2  TTC  993