BAC Information

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BAC

Clone NameB6Ng01-041C19
Chromosome7 (Build37)
Map Location 132,937,991 - 132,939,089
singlet/doubletsinglet
Overlap geneD430042O09Rik
Upstream geneEG545999, LOC670828, 4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1
Downstream geneGsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041C19.bB6Ng01-041C19.g
ACCDH867912DH867913
length1,097189
definitionDH867912|Mus musculus domesticus DNA, BAC clone: B6Ng01-041C19, 5' end.DH867913|Mus musculus domesticus DNA, BAC clone: B6Ng01-041C19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgctgtactggaatttactctgtgttgaattccaataactaga
tgccgagacactcaaggccaagaaaagctcatgagaagcgctcaccttta
gaagctgggttaaactccattaccacaagggtgtctgtggcctggggatg
ccggccttccagttcctggtccttggggacatccttctgtactgcatcat
ggctgggaagtggacattcatctctgttgtggactggcaggacagggtcc
tcagtctccgtctcagagaggacgtcttcctcaatagagtcgtactcgtc
gctggagccgtcctcttgggtctggaggcttgtgctgagccccaggcctt
ttctcagctcctgcagaaagcccaggagaggtgaaaggtgaggccttgta
tggaaccaaagaacagctccagccaacaaccagcagcacctcagccagat
gctggggctgctttgaggatgggaaagcaaaggtcagagggcacgaacat
gaggggtgctgtgaggagacaccatgaccatggcgactataaaagaaagc
atttacttggggcttgcttacagtttcaggggcttggtcctttgccacat
taagtttattgcatgtgaatttaaagtgaatttaaagccggacaacccaa
actgactgatgatggacacctgtatatgagagctgccactggcatgggct
caggaaacaagggacacgtggctggaagagaaggatcctatcatgcagta
actctgaggttccacaggacagagcttgtcagtgttgaacctgagtatta
agctgggcagatttctagtgatgagctgaggggtctgctttcctctagca
gatgaggaaatgaagaggtggcagacagacctaaggaggactgccagagg
gaggacggccagggaaagggatctagggctcattttcttctacccagagt
gcagaagatgatgccactagcagaccttctatcagcaaatgtgcatgctg
gaaaagaaaccaaagcagtaacaaagccttccctgttagcttgtggatgc
cttgggctactttagcataatcaggcttatcagaaagaatagggagg
tcatgtttacaaacttgctgtgtaaaccttgttccttaatttaataccat
tggttaaataaaattggctgcaaccaattactggagggattagaggtagg
gggcttttgagttacctgtttggagatggagaaggagagaggagagacca
agaggagaaggaggaaggagaggagaggagaggagagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_132937991_132939089
seq2: B6Ng01-041C19.b_34_1130 (reverse)

seq1  CCTCCCTAATCTTTCCTGATAAGCCTGTCTCTGCTAAAGTAGCCCAAGGC  50
      |||||||| ||||| ||||||||||||  | |||||||||||||||||||
seq2  CCTCCCTATTCTTT-CTGATAAGCCTGATTATGCTAAAGTAGCCCAAGGC  49

seq1  ATCCACGAGCT-ACAGGGGAGGGCTTGCTACTGCTTTGGTTTTCTCTCCA  99
      |||||| |||| |||||| |||  ||| ||||||||||||||  | ||||
seq2  ATCCACAAGCTAACAGGGAAGGCTTTGTTACTGCTTTGGTTTCTTTTCCA  99

seq1  GCATGCAC-TTTGCTGATAGAAGGTCTGCTAGTGGCATCATCTTCTGCAC  148
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACATTTGCTGATAGAAGGTCTGCTAGTGGCATCATCTTCTGCAC  149

seq1  TCTGGGTAGAAGAAAATGAGCCCTAGATCCCTTTCCCTGGCCGTCCTCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTAGAAGAAAATGAGCCCTAGATCCCTTTCCCTGGCCGTCCTCCC  199

seq1  TCTGGCAGTCCTCCTTCGGGTCTGTCTGCCACCTCTTCATTTTCCTCATC  248
      ||||||||||||||||  ||||||||||||||||||||| ||||||||||
seq2  TCTGGCAGTCCTCCTT-AGGTCTGTCTGCCACCTCTTCA-TTTCCTCATC  247

seq1  TGCTAGAGGAAAGCAGACCCCTCAGCTCATCACTTAGAAATCTGCCCAGC  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTAGAGGAAAGCAGACCCCTCAGCTCATCAC-TAGAAATCTGCCCAGC  296

seq1  TTAATACTCAGGTTCAACACTGACAAGCTCTGTCCTGTGGAACCTCAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTCAGGTTCAACACTGACAAGCTCTGTCCTGTGGAACCTCAGAG  346

seq1  TTACTGCATGATAGGATCCTTCTCTTCCAGCCACGTGTCCCTTGTTTCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCATGATAGGATCCTTCTCTTCCAGCCACGTGTCCCTTGTTTCCT  396

seq1  GAGCCCATGCCAGTGGCAGCTCTCATATACAGGTGTCCATCATCAGTCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCATGCCAGTGGCAGCTCTCATATACAGGTGTCCATCATCAGTCAG  446

seq1  TTTGGGTTGTCCGGCTTTAAATTCACTTTAAATTCACATGCAATAAACTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTGTCCGGCTTTAAATTCACTTTAAATTCACATGCAATAAACTT  496

seq1  AATGTGGCAAAGGACCAAGCCCCTGAAACTGTAAGCAAGCCCCAAGTAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCAAAGGACCAAGCCCCTGAAACTGTAAGCAAGCCCCAAGTAAA  546

seq1  TGCTTTCTTTTATAGTCGCCATGGTCATGGTGTCTCCTCACAGCACCCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTTTTATAGTCGCCATGGTCATGGTGTCTCCTCACAGCACCCCT  596

seq1  CATGTTCGTGCCCTCTGACCTTTGCTTTCCCATCCTCAAAGCAGCCCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCGTGCCCTCTGACCTTTGCTTTCCCATCCTCAAAGCAGCCCCAG  646

seq1  CATCTGGCTGAGGTGCTGCTGGTTGTTGGCTGGAGCTGTTCTTTGGTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGCTGAGGTGCTGCTGGTTGTTGGCTGGAGCTGTTCTTTGGTTCC  696

seq1  ATACAAGGCCTCACCTTTCACCTCTCCTGGGCTTTCTGCAGGAGCTGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGGCCTCACCTTTCACCTCTCCTGGGCTTTCTGCAGGAGCTGAGA  746

seq1  AAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCTGGGGCTCAGCACAAGCCTCCAGACCCAAGAGGACGGCTCCAG  796

seq1  CGACGAGTACGACTCTATTGAGGAAGACGTCCTCTCTGAGACGGAGACTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACGAGTACGACTCTATTGAGGAAGACGTCCTCTCTGAGACGGAGACTG  846

seq1  AGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCTGTCCTGCCAGTCCACAACAGAGATGAATGTCCACTTCCCAGC  896

seq1  CATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGCAGTACAGAAGGATGTCCCCAAGGACCAGGAACTGGAAGGCCG  946

seq1  GCATCCCCAGGCCACAGACACCCTTGTGGTAATGGAGTTTAACCCAGCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCCAGGCCACAGACACCCTTGTGGTAATGGAGTTTAACCCAGCTT  996

seq1  CTAAAGGTGAGCGCTTCTCATGAGCTTTTCTTGGCCTTGAGTGTCTCGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGTGAGCGCTTCTCATGAGCTTTTCTTGGCCTTGAGTGTCTCGGC  1046

seq1  ATCTAGTTATTGGAATTCAACACAGAGTAAATTCCAGTACAGCATGAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTTATTGGAATTCAACACAGAGTAAATTCCAGTACAGCATGAATT  1096

seq1  C  1099
      |
seq2  C  1097