BAC Information

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BAC

Clone NameB6Ng01-041I21
Chromosome7 (Build37)
Map Location 62,022,420 - 62,089,574
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668789, Mrps33p, LOC622146
Downstream geneLuzp2, LOC668796, Siglech, Tubgcp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041I21.bB6Ng01-041I21.g
ACCDH868183DH868184
length1,0861,181
definitionDH868183|Mus musculus domesticus DNA, BAC clone: B6Ng01-041I21, 5' end.DH868184|Mus musculus domesticus DNA, BAC clone: B6Ng01-041I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,022,420 - 62,023,524)(62,088,372 - 62,089,574)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcacggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatttccagtctttagctcttctttcttgccttttgtgcctctgggg
caaataaatctcttctgtgctgagaacttaagagtggatggcccagagct
gatccagagcctttcagatttgttaacatttgtatagagctgttttgtaa
acaggaagaggtgtggctggagaagtgttaggagcactggctgttcttgc
aaaggactcagttccagcactcctaattttgtctcacaatggtttctaaa
tacaattccaggggatcgaatatcagcttctggtagctacaggaaacagc
catgggaatggtacccagacctgcatacaggtaaaacactcaaacatttt
taaaatgattctgaaaaaccacaaatatataattgtgaaagttaaatgta
aaatttctgctttataaaatcacttataacaatataatacaacttcaaat
tctacaaagtcaaatggtgctactcaaattaccttagttttacagtagac
tatgcagtgtgagagtttaaagccagcataaagagaagatatgaaatatt
tagcttaattctgggaagaagtgctcttcctttgtgcctaaagtttctcc
aaataattttaaatatcagaattccgagaaacacaacaatttctttttga
aaaagtaatatagaaaatatgtgatggagagaaatttagaaaaattatag
attgttggatgaatcaactgtttaaatgcttctcta
gaattcaagaaggagatctccatggggtcttgttttgttctgctatgtag
cccagtcaaacctcaaatgtgcagcaatcctcctgtatcagctgcttggg
tgctgttcttcttatttttaaagatgataaagtaagttgcatactaataa
gggcatgcccctttgtaataataacaaaaaaaatgtgtatagcaggaaat
aacactcatttgaagaatgcatttttactcatataaaaagttaggattaa
gtattttaacgtcatcaccacatgaacccagtgtggtcatctccattatt
ttccatttctgtagtcgtcttactcagagcggtcaagcatctgacatgag
tcacttggtaatttttacaaatgaacaactgttgacatttttttgacatc
accccacaatttacattttcttgagggaaaatacattgggattctacagt
gtaagtctcccacttaggttttctttcttagtggaaagactgcatatgat
ccactaaggaagtaaagagttactgttgcctgcacttggccctcggggtc
tgctgtactctgcataggacacctataaaggccctttgaagggtgttagg
acatcaaggagcactgggctaaaggaggtcatgtgtggaattgtggaaac
tcttgcaagattagaagtttaagagtctaaattcaaatacagatatgtct
tagcagatgccatgtttcttgggaaatcctaggagtgtgagcctcctatt
tctatgatgggatgttcactattcagaaggaaaattcagctgtaaaggtg
attctctgtttcagaaaaccaatgtgatttctgaaaatgcaattcggaga
gcagcttcatgggaccaacctctattaggaatatgttcatacacgtatct
atgcccagtgaagaacatcaagaaattgcatttggctaaatgactttcca
caaagtctggaacctggagccaatgaggatactgtttacaaaagatatat
tctgataggagaatgttaccccttctaagcatttaatttcggagttttaa
tattttacttacgaatagaaatcgaaacctctagactctagaaatttttt
tcccaccacaagcaaccccatataccattgaatttcctccccaccactct
cctctgctctcttccatcttgtgagtctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62022420_62023524
seq2: B6Ng01-041I21.b_46_1131

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCACGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCACGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250

seq1  GAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT  350

seq1  GTTCATTTCCAGTCTTTAGCTCTTCTTTCTTGCCTTTTGTGCCTCTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTCCAGTCTTTAGCTCTTCTTTCTTGCCTTTTGTGCCTCTGGGG  400

seq1  CAAATAAATCTCTTCTGTGCTGAGAACTTAAGAGTGGATGGCCCAGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATCTCTTCTGTGCTGAGAACTTAAGAGTGGATGGCCCAGAGCT  450

seq1  GATCCAGAGCCTTTCAGATTTGTTAACATTTGTATAGAGCTGTTTTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGAGCCTTTCAGATTTGTTAACATTTGTATAGAGCTGTTTTGTAA  500

seq1  ACAGGAAGAGGTGTGGCTGGAGAAGTGTTAGGAGCACTGGCTGTTCTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGAGGTGTGGCTGGAGAAGTGTTAGGAGCACTGGCTGTTCTTGC  550

seq1  AAAGGACTCAGTTCCAGCACTCCTAATTTTGTCTCACAATGGTTTCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTCAGTTCCAGCACTCCTAATTTTGTCTCACAATGGTTTCTAAA  600

seq1  TACAATTCCAGGGGATCGAATATCAGCTTCTGGTAGCTACAGGAAACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCCAGGGGATCGAATATCAGCTTCTGGTAGCTACAGGAAACAGC  650

seq1  CATGGGAATGGTACCCAGACCTGCATACAGGTAAAACACTCAAACATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAATGGTACCCAGACCTGCATACAGGTAAAACACTCAAACATTTT  700

seq1  TAAAATGATTCTGAAAAACCACAAATATATAATTGTGAAAGTTAAATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGATTCTGAAAAACCACAAATATATAATTGTGAAAGTTAAATGTA  750

seq1  AAATTTCTGCTTTATAAAATCACTTATAACAATATAATACAACTTCAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTGCTTTATAAAATCACTTATAACAATATAATACAACTTCAAAT  800

seq1  TCTACAAAGTCAAATGGTGCTACTCAAATTACCTTAGTTTTTACAGTAGA  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTACAAAGTCAAATGGTGCTACTCAAATTACCTTAG-TTTTACAGTAGA  849

seq1  CTATGCAGTGTGAGAGTTTAAAAGCCAGCATAAAGAGAAGATATGAAATA  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTATGCAGTGTGAGAGTTT-AAAGCCAGCATAAAGAGAAGATATGAAATA  898

seq1  TTTAGCTTAATTCTGGGAAGAAGTGCTCTTCCTTTGTGCCTAAAAGTTTC  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTAGCTTAATTCTGGGAAGAAGTGCTCTTCCTTTGTGCCT-AAAGTTTC  947

seq1  TCCAAAATATTTTAAAATATCAGTATTTCCGAGAAACACAACATTTTCTT  1000
      ||| ||||| ||| ||||||||| | ||||||||||||||||| ||||||
seq2  TCC-AAATAATTTTAAATATCAG-AATTCCGAGAAACACAACAATTTCTT  995

seq1  TTTGGATAAAAGTAAATATAGAAAATATGTAGAATAGAAGAGATATTTTA  1050
      ||||   |||||| |||||||||||||||| ||   | ||||| | ||||
seq2  TTTG--AAAAAGT-AATATAGAAAATATGT-GA--TGGAGAGA-AATTTA  1038

seq1  GAAAAAATGTATAGATTTGTTTGGTATGAGTCCACTTGTTTTAAGTGCTT  1100
      ||||||   |||||| |||||  | |||| || |||   ||||| |||||
seq2  GAAAAA--TTATAGA-TTGTT--GGATGAATCAACT--GTTTAAATGCTT  1081

seq1  CTCTA  1105
      |||||
seq2  CTCTA  1086

seq1: chr7_62088372_62089574
seq2: B6Ng01-041I21.g_71_1251 (reverse)

seq1  ATGAGACTTAACAAAGATGGGAAGAGAGCAGAGGAGAGTGGTGGGGAGTG  50
      |||||||| |   ||||| |||||||||||||||||||||||||||||  
seq2  ATGAGACTCA--CAAGAT-GGAAGAGAGCAGAGGAGAGTGGTGGGGAGGA  47

seq1  AATTCTAATGGGTATTTGTGGTTGCTTTTGTGGCTGGTGAAAAAAATATT  100
      ||||| ||| ||||| || ||||||  |||||| ||| ||||||||| ||
seq2  AATTC-AAT-GGTATATGGGGTTGC--TTGTGG-TGG-GAAAAAAAT-TT  90

seq1  CTAGAGTTTTATAATGGTTTCTGATTTCTATTCTGTAGTTAAAATATTTA  150
      ||||||   | ||  |||||| ||||||||||| |||  ||||||| |||
seq2  CTAGAG---TCTAGAGGTTTC-GATTTCTATTC-GTAAGTAAAATA-TTA  134

seq1  AAACTCTG-AATTATATGCTTTAGAGTGGTAACATTTCTCCTATCAGAAT  199
      |||||| | ||||| ||||||   || ||||||| |||||||||||||| 
seq2  AAACTCCGAAATTAAATGCTTAGAAGGGGTAACA-TTCTCCTATCAGAA-  182

seq1  TATATCTTTTGTAAACAGTATCCTCATTGGCTCCAGGTTTCAGTACTTTG  249
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  TATATCTTTTGTAAACAGTATCCTCATTGGCTCCAGGTTCCAG-ACTTTG  231

seq1  TAGAAAAGTCATTTTAGCCAAATGCAATTTCTTGATGTTCTTCACTGGGC  299
      | | ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  T-GGAAAGTCA-TTTAGCCAAATGCAATTTCTTGATGTTCTTCACTGGGC  279

seq1  ATAGATACGTGTTATGAACATATTTCCTAATAGAGGTTGGTCCCATGAAG  349
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  ATAGATACGTG-TATGAACATA-TTCCTAATAGAGGTTGGTCCCATGAAG  327

seq1  CTGCTCTCCGAATTGCATTTTCAGAAATCACATTGGTTTTCTGAAACAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCCGAATTGCATTTTCAGAAATCACATTGGTTTTCTGAAACAGA  377

seq1  GAATCACCTTTACAGCTGAATTTTCCTTCTGAATAGTGAACATCCCATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACCTTTACAGCTGAATTTTCCTTCTGAATAGTGAACATCCCATCA  427

seq1  TAGAAATAGGAGGCTCACACTCCTAGGATTTCCCAAGAAACATGGCATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAGGAGGCTCACACTCCTAGGATTTCCCAAGAAACATGGCATCT  477

seq1  GCTAAGACATATCTGTATTTGAATTTAGACTCTTAAACTTCTAATCTTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGACATATCTGTATTTGAATTTAGACTCTTAAACTTCTAATCTTGC  527

seq1  AAGAGTTTCCACAATTCCACACATGACCTCCTTTAGCCCAGTGCTCCTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTCCACAATTCCACACATGACCTCCTTTAGCCCAGTGCTCCTTG  577

seq1  ATGTCCTAACACCCTTCAAAGGGCCTTTATAGGTGTCCTATGCAGAGTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTAACACCCTTCAAAGGGCCTTTATAGGTGTCCTATGCAGAGTAC  627

seq1  AGCAGACCCCGAGGGCCAAGTGCAGGCAACAGTAACTCTTTACTTCCTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACCCCGAGGGCCAAGTGCAGGCAACAGTAACTCTTTACTTCCTTA  677

seq1  GTGGATCATATGCAGTCTTTCCACTAAGAAAGAAAACCTAAGTGGGAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCATATGCAGTCTTTCCACTAAGAAAGAAAACCTAAGTGGGAGAC  727

seq1  TTACACTGTAGAATCCCAATGTATTTTCCCTCAAGAAAATGTAAATTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTGTAGAATCCCAATGTATTTTCCCTCAAGAAAATGTAAATTGTG  777

seq1  GGGTGATGTCAAAAAAATGTCAACAGTTGTTCATTTGTAAAAATTACCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATGTCAAAAAAATGTCAACAGTTGTTCATTTGTAAAAATTACCAA  827

seq1  GTGACTCATGTCAGATGCTTGACCGCTCTGAGTAAGACGACTACAGAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCATGTCAGATGCTTGACCGCTCTGAGTAAGACGACTACAGAAAT  877

seq1  GGAAAATAATGGAGATGACCACACTGGGTTCATGTGGTGATGACGTTAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAATGGAGATGACCACACTGGGTTCATGTGGTGATGACGTTAAA  927

seq1  ATACTTAATCCTAACTTTTTATATGAGTAAAAATGCATTCTTCAAATGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAATCCTAACTTTTTATATGAGTAAAAATGCATTCTTCAAATGAG  977

seq1  TGTTATTTCCTGCTATACACATTTTTTTTGTTATTATTACAAAGGGGCAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTCCTGCTATACACATTTTTTTTGTTATTATTACAAAGGGGCAT  1027

seq1  GCCCTTATTAGTATGCAACTTACTTTATCATCTTTAAAAATAAGAAGAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTATTAGTATGCAACTTACTTTATCATCTTTAAAAATAAGAAGAAC  1077

seq1  AGCACCCAAGCAGCTGATACAGGAGGATTGCTGCACATTTGAGGTTTGAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCAAGCAGCTGATACAGGAGGATTGCTGCACATTTGAGGTTTGAC  1127

seq1  TGGGCTACATAGCAGAACAAAACAAGACCCCATGGAGATCTCCTTCTTGA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTACATAGCAGAACAAAACAAGACCCCATGGAGATCTCCTTCTTGA  1177

seq1  ATTC  1203
      ||||
seq2  ATTC  1181