BAC Information

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BAC

Clone NameB6Ng01-042F07
Chromosome7 (Build37)3 (Build37)
Map Location 60,947,256 - 60,948,359105,884,793 - 105,885,152
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG620782, LOC100040692, Gm1865, LOC100040718
Downstream geneLOC668789, Mrps33p, LOC622146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042F07.bB6Ng01-042F07.g
ACCDH868741DH868742
length1,102864
definitionDH868741|Mus musculus domesticus DNA, BAC clone: B6Ng01-042F07, 5' end.DH868742|Mus musculus domesticus DNA, BAC clone: B6Ng01-042F07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,947,256 - 60,948,359)(105,884,793 - 105,885,152)
sequence
gaattccaagtttaaaatccttaatcaacctcaatgaaataatgaattac
ctcaataagaaattcatagaggagcccacatttatctttctctccactca
cctctcactcattaccatttgcctatgtttctcctatatttctaccttct
acaaactataaatatgtaaatatgtaaaaatttcccagaagttttcagat
gagatgaatttagcaaggaaccaattttgacacaaattgttctataaatt
tgaagatatgcaggagtgaatatttcccaaatcattgtgaggctgcattt
attataatctccaaaccagagaaaactatcacaataaaggaaattacaga
cccataaaaagatcagagcattggtgcaaaactacaaaaaagttagaatt
tcagccacatataaaataagtacttaattacctccaacttaatttatcct
tggtttctgatgctatataaactattttatgcccttttgaaaaggtcttt
agaaaattcttagtcctaggtataagaccggaacacacaaaattgaatgt
ttgtagaacaaaatatttctgcttctaatgacctgcaaaggagaggaaaa
gtgagctaataataagataattccatacaatagtataaaatgatataagt
aacagtttaaaaattagtttctgatagtattaaggatatattattgggag
ctaagaatagaaggacttcagtgaatgggcaaacacaaataaatgtggaa
agaggttggaaaatgtaaagagtttagatgcttttgtcaggacagagaaa
cttgatctattcacatgaaagccacacacttaactttcacctctttctct
tcctggcttatgataagtttattattcctattgcattcctgtaaagtata
gatctaattacttatgtatgttctttagagacatataaaatgcatacaat
atcattcaaagacgcatgttctatggtgccagaaatgttatgagaaagat
tctctgtgtctatgtctttctgtctctctctgtctctctatgtctctcca
tctgtactctctgtctcttttcagttttgtggtctgtggggtctgtttgc
at
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggatagataaagttcctttcccaatctgttgttggcatt
tttgtcttattgacggtgtcttttgccttacagaagctttgaaattttat
gaggtcctatttgtagattctcgatcttatggcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ctacttagatttgacataagtacaaggagataggaatggataaatttgca
cttctacatgataaccgcccattgtgccagcaccatttgttaaaaatgtt
gtcttttttccactggatggtattagctcccttgtcaaagagcaagtgac
cataggtgtgtgggcatctctttctttaaggtttgggaagtttgctgcta
ttattttgttgaagatatttgctggccctttacgttgaaaatcttcattc
tcatctactcctattattcataagtttggtcttctcattttgtcctggat
gttttgatttaggatccttttgcattttgcattttctctgattgttgtac
caatgttctctatgggatcttctgcacctgagattctctcttccttctct
tgtattctgttgcagatgctcgcatctatatttccagatttctttcctag
ggtttctatttccagcatttgcctcactttgggttttctttattgtgtct
acttctctttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60947256_60948359
seq2: B6Ng01-042F07.b_41_1142 (reverse)

seq1  ATGCAAACAGA-CACACAGA-CACAGAAACAGAAAAAGAGACAGAGAGGT  48
      ||||||||||| | |||||| |||| |||| | |||||||||||||| ||
seq2  ATGCAAACAGACCCCACAGACCACA-AAACTG-AAAAGAGACAGAGA-GT  47

seq1  ACAGATGGAGAGACATAGAGAGACAGAGAGAGACAGAAAGACATAGACAC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGAGAGACATAGAGAGACAGAGAGAGACAGAAAGACATAGACAC  97

seq1  AGAGAATCTTTCTCATAACATTTTCTGGCACCATAGAACATGCGTCTTTG  148
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGAGAATCTTTCTCATAACA-TTTCTGGCACCATAGAACATGCGTCTTTG  146

seq1  AATGATATTGTATGCATTTTATATGTCTCTAAAGAACATACATAAGTAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATTGTATGCATTTTATATGTCTCTAAAGAACATACATAAGTAAT  196

seq1  TAGATCTATACTTTACAGGAATGCAATAGGAATAATAAACTTATCATAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTATACTTTACAGGAATGCAATAGGAATAATAAACTTATCATAAG  246

seq1  CCAGGAAGAGAAAGAGGTGAAAGTTAAGTGTGTGGCTTTCATGTGAATAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGAGAAAGAGGTGAAAGTTAAGTGTGTGGCTTTCATGTGAATAG  296

seq1  ATCAAGTTTCTCTGTCCTGACAAAAGCATCTAAACTCTTTACATTTTCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTTCTCTGTCCTGACAAAAGCATCTAAACTCTTTACATTTTCCA  346

seq1  ACCTCTTTCCACATTTATTTGTGTTTGCCCATTCACTGAAGTCCTTCTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTTCCACATTTATTTGTGTTTGCCCATTCACTGAAGTCCTTCTAT  396

seq1  TCTTAGCTCCCAATAATATATCCTTAATACTATCAGAAACTAATTTTTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCTCCCAATAATATATCCTTAATACTATCAGAAACTAATTTTTAA  446

seq1  ACTGTTACTTATATCATTTTATACTATTGTATGGAATTATCTTATTATTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTACTTATATCATTTTATACTATTGTATGGAATTATCTTATTATTA  496

seq1  GCTCACTTTTCCTCTCCTTTGCAGGTCATTAGAAGCAGAAATATTTTGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTTTTCCTCTCCTTTGCAGGTCATTAGAAGCAGAAATATTTTGTT  546

seq1  CTACAAACATTCAATTTTGTGTGTTCCGGTCTTATACCTAGGACTAAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACATTCAATTTTGTGTGTTCCGGTCTTATACCTAGGACTAAGAA  596

seq1  TTTTCTAAAGACCTTTTCAAAAGGGCATAAAATAGTTTATATAGCATCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAAGACCTTTTCAAAAGGGCATAAAATAGTTTATATAGCATCAG  646

seq1  AAACCAAGGATAAATTAAGTTGGAGGTAATTAAGTACTTATTTTATATGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGGATAAATTAAGTTGGAGGTAATTAAGTACTTATTTTATATGT  696

seq1  GGCTGAAATTCTAACTTTTTTGTAGTTTTGCACCAATGCTCTGATCTTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAATTCTAACTTTTTTGTAGTTTTGCACCAATGCTCTGATCTTTT  746

seq1  TATGGGTCTGTAATTTCCTTTATTGTGATAGTTTTCTCTGGTTTGGAGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTCTGTAATTTCCTTTATTGTGATAGTTTTCTCTGGTTTGGAGAT  796

seq1  TATAATAAATGCAGCCTCACAATGATTTGGGAAATATTCACTCCTGCATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAATGCAGCCTCACAATGATTTGGGAAATATTCACTCCTGCATA  846

seq1  TCTTCAAATTTATAGAACAATTTGTGTCAAAATTGGTTCCTTGCTAAATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAATTTATAGAACAATTTGTGTCAAAATTGGTTCCTTGCTAAATT  896

seq1  CATCTCATCTGAAAACTTCTGGGAAATTTTTACATATTTACATATTTATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATCTGAAAACTTCTGGGAAATTTTTACATATTTACATATTTATA  946

seq1  GTTTGTAGAAGGTAGAAATATAGGAGAAACATAGGCAAATGGTAATGAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAGAAGGTAGAAATATAGGAGAAACATAGGCAAATGGTAATGAGT  996

seq1  GAGAGGTGAGTGGAGAGAAAGATAAATGTGGGCTCCTCTATGAATTTCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTGAGTGGAGAGAAAGATAAATGTGGGCTCCTCTATGAATTTCTT  1046

seq1  ATTGAGGTAATTCATTATTTCATTGAGGTTGATTAAGGATTTTAAACTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGTAATTCATTATTTCATTGAGGTTGATTAAGGATTTTAAACTTG  1096

seq1  GAATTC  1104
      ||||||
seq2  GAATTC  1102

seq1: chr3_105884793_105885152
seq2: B6Ng01-042F07.g_579_931 (reverse)

seq1  TAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGC-AACGCT  49
      ||||||| ||||||||||||||||||||||||||||||||||| || |||
seq2  TAAAAAGAGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCAAATGCT  50

seq1  GGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGCCAGCATCA  99
      ||| ||||||||||||||||||||||||||||  |||||||| |||||| 
seq2  GGAAATAGAAACCCTAGGAAAGAAATCTGGAAATATAGATGCGAGCATCT  100

seq1  GCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGATTCC  149
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  GCAACAGAATACAAGAGAAGGAAGAGAGAATCTCAGGTGCAGAAGATCCC  150

seq1  ATAGAGAACATCGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGAT  199
      ||||||||||| || |||||||||| |||||||| ||||||||||| |||
seq2  ATAGAGAACATTGGTACAACAATCAGAGAAAATGCAAAATGCAAAAGGAT  200

seq1  CCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACC  249
      ||||| |||||||         |||||||||| |||||||||||||||| 
seq2  CCTAAATCAAAAC---------ATCCAGGACAAAATGAGAAGACCAAACT  241

seq1  TACGCATAATAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCA  299
      || | ||||||||||| ||||||||||||||||||||||  ||||| |||
seq2  TATGAATAATAGGAGTAGATGAGAATGAAGATTTTCAACGTAAAGGGCCA  291

seq1  GCAAACATCTTCAACAAAATTATAGAAGAAAACTTCCCAAATC-TAAAGA  348
      ||||| |||||||||||||| |||| || |||||||||||| | ||||||
seq2  GCAAATATCTTCAACAAAATAATAGCAGCAAACTTCCCAAACCTTAAAGA  341

seq1  AAGAGATGCCCA  360
      ||||||||||||
seq2  AAGAGATGCCCA  353