BAC Information

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BAC

Clone NameB6Ng01-042G04
Chromosome10 (Build37)7 (Build37)
Map Location 104,053,922 - 104,054,359112,375,722 - 112,376,671
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042G04.bB6Ng01-042G04.g
ACCDH868781DH868782
length769950
definitionDH868781|Mus musculus domesticus DNA, BAC clone: B6Ng01-042G04, 5' end.DH868782|Mus musculus domesticus DNA, BAC clone: B6Ng01-042G04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,922 - 104,054,359)(112,375,722 - 112,376,671)
sequence
gaattctctcacctaagtaataccgaatggctgagaagcacctgaaaaaa
tgttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgag
attccacctcacacaagtcagaatggctaagatcaaaaattcatgtgaca
gcagatgatcgcaaggatgtggagaaagagaaacactcctccattgttgg
tgggattgaaagcttgtacaaccactcgggaaatcagtctggcggttcct
cagaaaattggatatagtactaccagaggatccagcaatacctctcccgg
gcatatatccagaagatgttccaaccagtaagaaggacacatgctccact
atgtttttagaagtcttatttataatagccagaagctggaaagaacccag
atgcccctcagcagaggaatggatacagaaattgttgtacatttgcacta
tggagtactactcagctattaaaaagaatgaatttatgaaattcctaggc
aaatggatggacctggagggcatcatcctgagtgaggtaacccaatcaca
aaggaactcacacaatatatactcactgataagtggatattagcccagaa
acttagaatacccaagatataagatacaatttgctaaacacatgaaactc
aagaagaatgaagaccaaattgtggaccatttgccccttcttagaattgg
gaacaaaacactcatggaaaggagatacatagacaatgttttgagctgag
acgaaaggatggaccatct
gaattccagggcacagtaagtcttagccagcttaggctacctgaaaccat
tttccaaaaagccaaattagtaaataatgtcagatcatgaactatgcagg
aaagaatagtacgctgtaattaccaaagcaattttaaaatcagcacttct
gtgcagaaatgacaaaataaaaagataagcaagattcccctgctttatcc
tcttcagtgtttgcctatggacttgggttgcagtggagttgaaagcctga
ttccttcacccatgttctaaccctctgctctgcttggccatccacacacc
taccactaccccagcagcatcagaacctcagggcactttcacagaggact
caccaacaatttctagcctggttgtcccctctgccttttcaggggtgacc
acaaccttacatctgtattctcctgcttctcgaagctccatcgtgggcag
atggagtgaggcatttccaagttctagccccaacaagaacacatcagctc
caggacgaactgcctcttgttgatctccataaaactcaaacacctggacc
tcagattcattcctgtccttcttcaaagaccagatgactcccacagtatt
gaggtccagccagggattttgcagggtatggtgacatcttcatgtaggaa
taccatctgagtcttccctgccatcgccacttccaatctacctatggcaa
tatgagaacccagttaaaggaggtttgtagtacccagtcatggtgaagtg
ataaatagcttttgttatatagccttgaacagctcagaaaagctcttacc
tcattaccctagatagatcgactagcactgtcctttctttagacaattgc
tttggctgttaggggcctatgtgcacattttacaatcagatagtgaaata
cttaactacaattttacatttattgagtatgttagtgtttggaaggggtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053922_104054359
seq2: B6Ng01-042G04.b_49_486 (reverse)

seq1  AAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTGGGT  50
      |||||||| ||| |||||||||| ||||||||| ||||||||||||||||
seq2  AAATGTACAACAATTTCTGTATCCATTCCTCTGCTGAGGGGCATCTGGGT  50

seq1  TCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTGGA  100
      ||||||||||| |||||||||||||||||| || |||  || ||||||||
seq2  TCTTTCCAGCTTCTGGCTATTATAAATAAGACTTCTAAAAACATAGTGGA  100

seq1  GCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAGAA  150
      ||||||||||||||||| ||||||  |||||||||||||||||||| | |
seq2  GCATGTGTCCTTCTTACTGGTTGGAACATCTTCTGGATATATGCCCGGGA  150

seq1  GAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGACGAAC  200
      ||||||||||||||||||| ||||||||||| ||||||||||||| ||||
seq2  GAGGTATTGCTGGATCCTCTGGTAGTACTATATCCAATTTTCTGAGGAAC  200

seq1  CGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACA  250
      |||||||| ||||||| |||||||||||||||| | ||||||||||||||
seq2  CGCCAGACTGATTTCCCGAGTGGTTGTACAAGCTTTCAATCCCACCAACA  250

seq1  ATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCAC  300
      ||||||||||||| ||||||||||||||||| || | |||||||||||||
seq2  ATGGAGGAGTGTTTCTCTTTCTCCACATCCTTGCGATCATCTGCTGTCAC  300

seq1  CTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGG  350
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGAATTTTTGATCTTAGCCATTCTGACTTGTGTGAGGTGGAATCTCAGG  350

seq1  GTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTT  400

seq1  CAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGA  438
      |||||||||||| ||||||||||||| || ||||||||
seq2  CAGGTGCTTCTCAGCCATTCGGTATTACTTAGGTGAGA  438

seq1: chr7_112375722_112376671
seq2: B6Ng01-042G04.g_64_1013 (reverse)

seq1  CACCCCTTCCAAACACTAACATACTCAATAAATGTAAAATTGTAGTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTCCAAACACTAACATACTCAATAAATGTAAAATTGTAGTTAAG  50

seq1  TATTTCACTATCTGATTGTAAAATGTGCACATAGGCCCCTAACAGCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACTATCTGATTGTAAAATGTGCACATAGGCCCCTAACAGCCAAA  100

seq1  GCAATTGTCTAAAGAAAGGACAGTGCTAGTCGATCTATCTAGGGTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTGTCTAAAGAAAGGACAGTGCTAGTCGATCTATCTAGGGTAATGA  150

seq1  GGTAAGAGCTTTTCTGAGCTGTTCAAGGCTATATAACAAAAGCTATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAGCTTTTCTGAGCTGTTCAAGGCTATATAACAAAAGCTATTTAT  200

seq1  CACTTCACCATGACTGGGTACTACAAACCTCCTTTAACTGGGTTCTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACCATGACTGGGTACTACAAACCTCCTTTAACTGGGTTCTCATA  250

seq1  TTGCCATAGGTAGATTGGAAGTGGCGATGGCAGGGAAGACTCAGATGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATAGGTAGATTGGAAGTGGCGATGGCAGGGAAGACTCAGATGGTA  300

seq1  TTCCTACATGAAGATGTCACCATACCCTGCAAAATCCCTGGCTGGACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACATGAAGATGTCACCATACCCTGCAAAATCCCTGGCTGGACCTC  350

seq1  AATACTGTGGGAGTCATCTGGTCTTTGAAGAAGGACAGGAATGAATCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTGGGAGTCATCTGGTCTTTGAAGAAGGACAGGAATGAATCTGA  400

seq1  GGTCCAGGTGTTTGAGTTTTATGGAGATCAACAAGAGGCAGTTCGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGGTGTTTGAGTTTTATGGAGATCAACAAGAGGCAGTTCGTCCTG  450

seq1  GAGCTGATGTGTTCTTGTTGGGGCTAGAACTTGGAAATGCCTCACTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGATGTGTTCTTGTTGGGGCTAGAACTTGGAAATGCCTCACTCCAT  500

seq1  CTGCCCACGATGGAGCTTCGAGAAGCAGGAGAATACAGATGTAAGGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACGATGGAGCTTCGAGAAGCAGGAGAATACAGATGTAAGGTTGT  550

seq1  GGTCACCCCTGAAAAGGCAGAGGGGACAACCAGGCTAGAAATTGTTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCCCTGAAAAGGCAGAGGGGACAACCAGGCTAGAAATTGTTGGTG  600

seq1  AGTCCTCTGTGAAAGTGCCCTGAGGTTCTGATGCTGCTGGGGTAGTGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTGTGAAAGTGCCCTGAGGTTCTGATGCTGCTGGGGTAGTGGTA  650

seq1  GGTGTGTGGATGGCCAAGCAGAGCAGAGGGTTAGAACATGGGTGAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGGATGGCCAAGCAGAGCAGAGGGTTAGAACATGGGTGAAGGAA  700

seq1  TCAGGCTTTCAACTCCACTGCAACCCAAGTCCATAGGCAAACACTGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTTCAACTCCACTGCAACCCAAGTCCATAGGCAAACACTGAAGA  750

seq1  GGATAAAGCAGGGGAATCTTGCTTATCTTTTTATTTTGTCATTTCTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGCAGGGGAATCTTGCTTATCTTTTTATTTTGTCATTTCTGCAC  800

seq1  AGAAGTGCTGATTTTAAAATTGCTTTGGTAATTACAGCGTACTATTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGCTGATTTTAAAATTGCTTTGGTAATTACAGCGTACTATTCTTT  850

seq1  CCTGCATAGTTCATGATCTGACATTATTTACTAATTTGGCTTTTTGGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATAGTTCATGATCTGACATTATTTACTAATTTGGCTTTTTGGAAA  900

seq1  ATGGTTTCAGGTAGCCTAAGCTGGCTAAGACTTACTGTGCCCTGGAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCAGGTAGCCTAAGCTGGCTAAGACTTACTGTGCCCTGGAATTC  950