BAC Information

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BAC

Clone NameB6Ng01-043B08
Chromosome7 (Build37)
Map Location 4,265,061 - 4,266,131
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801
Downstream geneNcr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043B08.bB6Ng01-043B08.g
ACCDH869258DH869259
length1,0651,222
definitionDH869258|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B08, 5' end.DH869259|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtttgtcggcttcaaggattttctaggatattggaacattg
gcgaaggctatgtcagaattcaatcttaaagggcacttataataaaataa
tactaaaagagagcacatggatccatacatcagactaactcggggatagg
gtatgagtatacgggttatgagaatgccaaggttccaggaggtgagtttc
tctgaaactctttgcctcatgagtgcttccaggcttctcggcttgtcaag
tagactacactggagtgtgcatagcacagaaaaaggaaatgatgaagtta
agaatacagagctgtgactcagctgatccaactcatgaacacaagaagtg
ttggtccctaagtttccacaatacagaagagggatcatttactcactagt
tttagagtgtttctatacatgaaggataatttcctgaagaattaatcaga
gaaggggagggaatagttggtcagtgatgtctgtcttcctattaaggaat
gtcctttgaggttggtcagggaaactcactttacccattaatgttgaacc
tgtaaagttataagatgcatggatgtggttttcttagagtaggtgactcc
ttgtatttcaaattttgttgagacagtagaaatactgtggagagatctat
gtgaggagaaatcaggagtgttagagaatctcatatctgccctaactgat
cccaatattattcctcatgaatgtattatgacacctcctatatatgcctt
gatacatagatatcccaatgtgtttggccagacaagataaggattctttg
gcaagctctttaactattattgtataatctgataccctgattcaaacttc
atctctctttaaaaagtattttttactgaaattcaataaatcctatcgcc
tctttgtttcttctcctctagactttctattactctttctcaagctttct
cataacacttacattcttacattgagagcatttttttcattgatcattac
agttacaggtgtgagtccatttctggacatgcacacaaccatatatggat
gaagtcggtttgttt
gaattcagaacttttcagctggggaacgaggtaagtctgatcttgaactt
tctaaggaaattcaagacagtctatcagaagtaaagtggaaaatggcttt
acaagttaggtttggccttgaattttttctggtgttaggagcccttttgt
tccttttcacatgttatatagtgcttaagatagggctgaaaattctagag
gaaattcaggacagtctatcagaagtaaagcggggagagagagtaggagc
aaggagaaacggtaagtatacaggcctttccaagggtcttgaacccgagg
aaaagttaaggtcaggtaggaatacctggggagagattagaaggaagaaa
aagaaaaaagaaaagaaaaaagatcaattagcggaggtctctaggagata
ctcgtcactagatgagctcaggaagccagctcttagtaactctgaagcaa
gtgaagaatcctcctctgaggaaacagactgggagaaaaaagcggctcat
tatgaaagaaaaggataccagccgccaagtaaagtgctaactagtcattt
aaggaaaaagccaaaagcggctggcgaaggccagtttgctaattggcctc
agggcaatcggctaccaggtgcactcccgccctatgcggagtccccgccc
tgcgtagtgcgtcagcccgtagtgcgtcagcaatgcgcagagaggcagtg
cgcagactcattcattccccgagaggaacaaagaaaaatacaacaggcat
ttccagtctttgaaggagccgagggtgggcgtgtccacgctccggtagaa
tatgtgcagattaaatatgggatcatgctaattttgccttggtgcagttg
gacaggcttgccggcgtggcactgactcctgccgactggcaaatgattgc
aaagccgctctcctagtatggccaaatatgtgggaatggcgagctctgtg
gcaagaggcggcacagcgcaggcccgagcaacgctgctgcttttatctca
gagcagagagattggactttgacttgtaacgggcaaaaagctattctgct
aactgataagaggtatcaatgggaagtctaacacaggaatgtcaatagta
ctactagttgtctacctgtagtacagagccttttttgcaagtgaggtaac
attcctttatttggttcctttacttgaatgctcccctggtgccataagag
acttacgccaggtcaccagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4265061_4266131
seq2: B6Ng01-043B08.b_44_1108

seq1  GAATTCCAAGTTTGTCGGCTTCAAGGATTTTCTAGGATATTGGAACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTTTGTCGGCTTCAAGGATTTTCTAGGATATTGGAACATTG  50

seq1  GCGAAGGCTATGTCAGAATTCAATCTTAAAGGGCACTTATAATAAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGGCTATGTCAGAATTCAATCTTAAAGGGCACTTATAATAAAATAA  100

seq1  TACTAAAAGAGAGCACATGGATCCATACATCAGACTAACTCGGGGATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAAGAGAGCACATGGATCCATACATCAGACTAACTCGGGGATAGG  150

seq1  GTATGAGTATACGGGTTATGAGAATGCCAAGGTTCCAGGAGGTGAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGTATACGGGTTATGAGAATGCCAAGGTTCCAGGAGGTGAGTTTC  200

seq1  TCTGAAACTCTTTGCCTCATGAGTGCTTCCAGGCTTCTCGGCTTGTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACTCTTTGCCTCATGAGTGCTTCCAGGCTTCTCGGCTTGTCAAG  250

seq1  TAGACTACACTGGAGTGTGCATAGCACAGAAAAAGGAAATGATGAAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTACACTGGAGTGTGCATAGCACAGAAAAAGGAAATGATGAAGTTA  300

seq1  AGAATACAGAGCTGTGACTCAGCTGATCCAACTCATGAACACAAGAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAGAGCTGTGACTCAGCTGATCCAACTCATGAACACAAGAAGTG  350

seq1  TTGGTCCCTAAGTTTCCACAATACAGAAGAGGGATCATTTACTCACTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCCTAAGTTTCCACAATACAGAAGAGGGATCATTTACTCACTAGT  400

seq1  TTTAGAGTGTTTCTATACATGAAGGATAATTTCCTGAAGAATTAATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTGTTTCTATACATGAAGGATAATTTCCTGAAGAATTAATCAGA  450

seq1  GAAGGGGAGGGAATAGTTGGTCAGTGATGTCTGTCTTCCTATTAAGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAGGGAATAGTTGGTCAGTGATGTCTGTCTTCCTATTAAGGAAT  500

seq1  GTCCTTTGAGGTTGGTCAGGGAAACTCACTTTACCCATTAATGTTGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGAGGTTGGTCAGGGAAACTCACTTTACCCATTAATGTTGAACC  550

seq1  TGTAAAGTTATAAGATGCATGGATGTGGTTTTCTTAGAGTAGGTGACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTTATAAGATGCATGGATGTGGTTTTCTTAGAGTAGGTGACTCC  600

seq1  TTGTATTTCAAATTTTGTTGAGACAGTAGAAATACTGTGGAGAGATCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTCAAATTTTGTTGAGACAGTAGAAATACTGTGGAGAGATCTAT  650

seq1  GTGAGGAGAAATCAGGAGTGTTAGAGAATCTCATATCTGCCCTAACTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGAAATCAGGAGTGTTAGAGAATCTCATATCTGCCCTAACTGAT  700

seq1  CCCAATATTATTCCTCATGAATGTATTATGACACCTCCTATATATGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATATTATTCCTCATGAATGTATTATGACACCTCCTATATATGCCTT  750

seq1  GATACATAGATATCCCAATGTGTTTGGCCAGACAAGATAAGGATTCTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATAGATATCCCAATGTGTTTGGCCAGACAAGATAAGGATTCTTTG  800

seq1  GCAAGCTCTTTAACTATTATTGTATAATCTGATACCCTGATTCAAACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTTTAACTATTATTGTATAATCTGATACCCTGATTCAAACTTC  850

seq1  ATCTCTTCTTTAAAAAGTA-TTTTTACTGAAATTCAATTAAATCCTATCG  899
      ||||| ||||||||||||| ||||||||||||||||| ||||||||||||
seq2  ATCTC-TCTTTAAAAAGTATTTTTTACTGAAATTCAA-TAAATCCTATCG  898

seq1  CCTCTTTGTTTCTTCTCCTCTAGACTTTTCTATTACTCTTTCTCCAAGCT  949
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  CCTCTTTGTTTCTTCTCCTCTAGAC-TTTCTATTACTCTTTCT-CAAGCT  946

seq1  TTCTCATAACACCTCACATTCTTACATTGAGAGCATTTTTTTTTCATTGA  999
      ||||||||||| || ||||||||||||||||||||  |||||||||||||
seq2  TTCTCATAACA-CTTACATTCTTACATTGAGAGCA--TTTTTTTCATTGA  993

seq1  TCATTACAGTTACAGGTGTGAGTCCATTTCTGTACATGCACACACACATA  1049
      |||||||||||||||||||||||||||||||| |||||||||||  ||||
seq2  TCATTACAGTTACAGGTGTGAGTCCATTTCTGGACATGCACACAACCATA  1043

seq1  TATGGATG-AGTCTGTTTTGTTT  1071
      |||||||| |||| | |||||||
seq2  TATGGATGAAGTC-GGTTTGTTT  1065