BAC Information

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BAC

Clone NameB6Ng01-043N01
Chromosome7 (Build37)
Map Location 38,136,681 - 38,287,417
singlet/doubletdoublet
Overlap geneZfp536
Upstream geneTshz3, LOC100043874
Downstream geneLOC100043453, EG627844, C80913, Ccne1, 1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594, EG627983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043N01.bB6Ng01-043N01.g
ACCDH869759DH869760
length1,0741,053
definitionDH869759|Mus musculus domesticus DNA, BAC clone: B6Ng01-043N01, 5' end.DH869760|Mus musculus domesticus DNA, BAC clone: B6Ng01-043N01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,136,681 - 38,137,764)(38,286,361 - 38,287,417)
sequence
gaattcactttgcagaccaagaaggccttgatctcacagagatctgcctg
cctctgccttcccagtgcaggaaataaaggcgtgcaccaccacaccctgc
tctccgaaaagaaaatttgagatagttactcccattttagtctctattaa
aaaggatcccctgaaagaagttcctccagaatatattttttataatcaca
ccaaaatcacgttcatgagatgtgcatggagaagagacaagtttgattct
caaaggttcccgttattgaagcaaaaattaatatttgtgccgtttcaaaa
ttggaataaaattgcgaagatgcaaacgccatcctatatcacgatctata
aaccagtcgcaggtgccagatcgacggtaaaaatgatttaaaatccacgc
gaataattttattaaactgatttgaaatcatattctatgctgccttcatt
tattaactgggtctccaacaacaaagggggttataattgatttttgcaaa
tagagacgtgttcccgagtaatgcagcccagagaagccactcccatctcc
tggtgtgaatatgactttgaaagtgagggccacctttgtcacaccaagcc
ttgttctgagtccccacacccctggcctctgcagacttgagacacagtgc
tggggacagccatactctacaagaacacaatggcctgtgtgtacggagtg
ctgtgatttgaatctgaaatgtctcttgcacgctaatgtttagctctcag
tcactagctggaggttctgtttgagatacgtagaacccttttagcaagag
ggacacagtagcccctgattctgacctgttttctctgctttttccctgct
gtcatttcagaagcccaaagttccctgccactacatctacatgtcttttc
ccctaaaacatattgatgcttcagaaaccatgtaccagaataagccttcc
tttccttaaggtaaaagtttggtagacgggatgagaacgtgacttgtaga
ctgggaatcgacacatgcagagagcttagcactgaacatcacatgcatgg
aggttgacgtaatgcaggacgcag
gaattctgggaagggggctccaggaagagggctggcggagggaggctata
aggacagagtctgcctagaaggactggagaggagaaaggtgaggatgcag
acgagactccagctgtagtggcatgacttgcgcagagtttggggaatctg
gtaggactggggtgattagagagagcagtgagctgccctccatagggatc
agaggattgatttcctgggagatgagagctcctcgggcaaggcttctcca
gcctcactcaggcaccagcttcttctccccgagcccagattcatagatga
gcctcctttgctttgctccctgctggtggtctccacctcaccatccctca
ccaggccagagagaagaataggcgtgcagaatccgaaggacaccccacag
ctaatgaatgcattgtcacaggaaaatgctgtggaccccaagcccttccc
gctacagcgccagtcacagttcccaccctgcagactgaatctagaatgtc
tcataagctcactttgagaacaacgttatgaatccttgttcaccgtctgg
tgacactaatttttggaggtggggctcatggagatagttcattggaaagt
tacagtacggctcctagttttggcccatggtgatacggaggagccagcac
agcacatttcttccacctagaacgctgccacacttccatgccatgatgga
ctgagatctcggaaactgtgaaccaagagacaggcaaattttgtctcttc
agttgtttctgcacaggattttggttgcagacactaaagtaactgataca
ctgcccgcagcctgtggggagtcttcaggcccacagcagagtgggcagct
cgaggattacaggggtattggtaacagcagcatcagtggataagaaagaa
gagacccacaggtggcccagtcacaacaggtgacaggcaagtctctcaga
cttcctctctgaccattaagaaaggactgtgggctaggtaaaccagaaat
acgtctgacccccagtgcttgatttaaagctcaggtgtactctaagggaa
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38136681_38137764
seq2: B6Ng01-043N01.b_41_1114

seq1  GAATTCACTTTGCAGACCAAGAAGGCCTTGATCTCACAGAGATCTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGCAGACCAAGAAGGCCTTGATCTCACAGAGATCTGCCTG  50

seq1  CCTCTGCCTTCCCAGTGCAGGAAATAAAGGCGTGCACCACCACACCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTTCCCAGTGCAGGAAATAAAGGCGTGCACCACCACACCCTGC  100

seq1  TCTCCGAAAAGAAAATTTGAGATAGTTACTCCCATTTTAGTCTCTATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGAAAAGAAAATTTGAGATAGTTACTCCCATTTTAGTCTCTATTAA  150

seq1  AAAGGATCCCCTGAAAGAAGTTCCTCCAGAATATATTTTTTATAATCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCCCCTGAAAGAAGTTCCTCCAGAATATATTTTTTATAATCACA  200

seq1  CCAAAATCACGTTCATGAGATGTGCATGGAGAAGAGACAAGTTTGATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATCACGTTCATGAGATGTGCATGGAGAAGAGACAAGTTTGATTCT  250

seq1  CAAAGGTTCCCGTTATTGAAGCAAAAATTAATATTTGTGCCGTTTCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTTCCCGTTATTGAAGCAAAAATTAATATTTGTGCCGTTTCAAAA  300

seq1  TTGGAATAAAATTGCGAAGATGCAAACGCCATCCTATATCACGATCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATAAAATTGCGAAGATGCAAACGCCATCCTATATCACGATCTATA  350

seq1  AACCAGTCGCAGGTGCCAGATCGACGGTAAAAATGATTTAAAATCCACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTCGCAGGTGCCAGATCGACGGTAAAAATGATTTAAAATCCACGC  400

seq1  GAATAATTTTATTAAACTGATTTGAAATCATATTCTATGCTGCCTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTTTATTAAACTGATTTGAAATCATATTCTATGCTGCCTTCATT  450

seq1  TATTAACTGGGTCTCCAACAACAAAGGGGGTTATAATTGATTTTTGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACTGGGTCTCCAACAACAAAGGGGGTTATAATTGATTTTTGCAAA  500

seq1  TAGAGACGTGTTCCCGAGTAATGCAGCCCAGAGAAGCCACTCCCATCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACGTGTTCCCGAGTAATGCAGCCCAGAGAAGCCACTCCCATCTCC  550

seq1  TGGTGTGAATATGACTTTGAAAGTGAGGGCCACCTTTGTCACACCAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGAATATGACTTTGAAAGTGAGGGCCACCTTTGTCACACCAAGCC  600

seq1  TTGTTCTGAGTCCCCACACCCCTGGCCTCTGCAGACTTGAGACACAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGAGTCCCCACACCCCTGGCCTCTGCAGACTTGAGACACAGTGC  650

seq1  TGGGGACAGCCATACTCTACAAGAACACAATGGCCTGTGTGTACGGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAGCCATACTCTACAAGAACACAATGGCCTGTGTGTACGGAGTG  700

seq1  CTGTGATTTGAATCTGAAATGTCTCTTGCACGCTAATGTTTAGCTCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATTTGAATCTGAAATGTCTCTTGCACGCTAATGTTTAGCTCTCAG  750

seq1  TCACTAGCTGGAGGTTCTGTTTGAGATACGTAGAACCCTTTTAGCAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGCTGGAGGTTCTGTTTGAGATACGTAGAACCCTTTTAGCAAGAG  800

seq1  GGACACAGTAGCCCCTGATTCTGACCTGTTTTCTCTGCTTTTTCCCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGTAGCCCCTGATTCTGACCTGTTTTCTCTGCTTTTTCCCTGCT  850

seq1  GTCATTTCAGAAGCCCAAAGTTCCCTGCCACTACAATCTACATGTCTTTT  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTCATTTCAGAAGCCCAAAGTTCCCTGCCACTAC-ATCTACATGTCTTTT  899

seq1  CCCCCTAAAACATATTGATGCTTCAGAAACCATGTTCCAGAATAAGCCTT  950
       |||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  -CCCCTAAAACATATTGATGCTTCAGAAACCATGTACCAGAATAAGCCTT  948

seq1  CCCTTCCTTAAGGTAAAAGTTTGGTAGAAGGGATGAGAAAGGTGACATGT  1000
      || ||||||||||||||||||||||||| |||||||| || ||||| |||
seq2  CCTTTCCTTAAGGTAAAAGTTTGGTAGACGGGATGAG-AACGTGACTTGT  997

seq1  AGACCTGGAATCGACCACATGCAGAGAGCCTTAGCACTGAAACATCACAG  1050
      ||||  |||||||| ||||||||||||| |||||||||| ||||||||| 
seq2  AGACTGGGAATCGA-CACATGCAGAGAG-CTTAGCACTG-AACATCACA-  1043

seq1  TGCATGGAGTTTGACAGTAAAGGCAGGGACGCAG  1084
      ||||||||| ||||| || || ||| ||||||||
seq2  TGCATGGAGGTTGAC-GT-AATGCA-GGACGCAG  1074

seq1: chr7_38286361_38287417
seq2: B6Ng01-043N01.g_66_1118 (reverse)

seq1  AATTTCCCTTAAGATACACTTGAGCTTTAAATCAAGCACTGTGGGTCAGA  50
      |||||||||||   ||||| ||||||||||||||||||||| ||||||||
seq2  AATTTCCCTTAGAGTACACCTGAGCTTTAAATCAAGCACTGGGGGTCAGA  50

seq1  CGTATTTCTGGTTTTACCTAGCCCACAGTCCTTTCTTAATGGTCAGAGAG  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CGTATTTCTGG-TTTACCTAGCCCACAGTCCTTTCTTAATGGTCAGAGAG  99

seq1  GGAGTCTGAGGGACTTGCCTGTCACCTGTTGTGACTGGGCCACCTGTGGG  150
      | |||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  GAAGTCTGAGAGACTTGCCTGTCACCTGTTGTGACTGGGCCACCTGT-GG  148

seq1  GTCTCTTCTTTTCTTATCCACTGATGCTGCTGTTACCAATACCCCTGTAA  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTC-TTTCTTATCCACTGATGCTGCTGTTACCAATACCCCTGTAA  197

seq1  TCCTCGAGCTGCCCACTCCTGCTGTGGGCCTGAAGACTCCCCACAGGCTG  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCTCGAGCTGCCCACT-CTGCTGTGGGCCTGAAGACTCCCCACAGGCTG  246

seq1  CGGGCAGTGTATCAGTTACTTTAGTGTCTGCAACCAAAATCCTGTGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAGTGTATCAGTTACTTTAGTGTCTGCAACCAAAATCCTGTGCAGA  296

seq1  AACAACTGAAGAGACAAAATTTGCCTGTCTCTTGGTTCACAGTTTCCGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTGAAGAGACAAAATTTGCCTGTCTCTTGGTTCACAGTTTCCGAG  346

seq1  ATCTCAGTCCATCATGGCATGGAAGTGTGGCAGCGTTCTAGGTGGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTCCATCATGGCATGGAAGTGTGGCAGCGTTCTAGGTGGAAGAA  396

seq1  ATGTGCTGTGCTGGCTCCTCCGTATCACCATGGGCCAAAACTAGGAGCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTGTGCTGGCTCCTCCGTATCACCATGGGCCAAAACTAGGAGCCG  446

seq1  TACTGTAACTTTCCAATGAACTATCTCCATGAGCCCCACCTCCAAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAACTTTCCAATGAACTATCTCCATGAGCCCCACCTCCAAAAATT  496

seq1  AGTGTCACCAGACGGTGAACAAGGATTCATAACGTTGTTCTCAAAGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCACCAGACGGTGAACAAGGATTCATAACGTTGTTCTCAAAGTGAG  546

seq1  CTTATGAGACATTCTAGATTCAGTCTGCAGGGTGGGAACTGTGACTGGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAGACATTCTAGATTCAGTCTGCAGGGTGGGAACTGTGACTGGCG  596

seq1  CTGTAGCGGGAAGGGCTTGGGGTCCACAGCATTTTCCTGTGACAATGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCGGGAAGGGCTTGGGGTCCACAGCATTTTCCTGTGACAATGCAT  646

seq1  TCATTAGCTGTGGGGTGTCCTTCGGATTCTGCACGCCTATTCTTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGCTGTGGGGTGTCCTTCGGATTCTGCACGCCTATTCTTCTCTCT  696

seq1  GGCCTGGTGAGGGATGGTGAGGTGGAGACCACCAGCAGGGAGCAAAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGTGAGGGATGGTGAGGTGGAGACCACCAGCAGGGAGCAAAGCAA  746

seq1  AGGAGGCTCATCTATGAATCTGGGCTCGGGGAGAAGAAGCTGGTGCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCTCATCTATGAATCTGGGCTCGGGGAGAAGAAGCTGGTGCCTGA  796

seq1  GTGAGGCTGGAGAAGCCTTGCCCGAGGAGCTCTCATCTCCCAGGAAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCTGGAGAAGCCTTGCCCGAGGAGCTCTCATCTCCCAGGAAATCA  846

seq1  ATCCTCTGATCCCTATGGAGGGCAGCTCACTGCTCTCTCTAATCACCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGATCCCTATGGAGGGCAGCTCACTGCTCTCTCTAATCACCCCA  896

seq1  GTCCTACCAGATTCCCCAAACTCTGCGCAAGTCATGCCACTACAGCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTACCAGATTCCCCAAACTCTGCGCAAGTCATGCCACTACAGCTGGA  946

seq1  GTCTCGTCTGCATCCTCACCTTTCTCCTCTCCAGTCCTTCTAGGCAGACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGTCTGCATCCTCACCTTTCTCCTCTCCAGTCCTTCTAGGCAGACT  996

seq1  CTGTCCTTATAGCCTCCCTCCGCCAGCCCTCTTCCTGGAGCCCCCTTCCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTTATAGCCTCCCTCCGCCAGCCCTCTTCCTGGAGCCCCCTTCCC  1046

seq1  AGAATTC  1057
      |||||||
seq2  AGAATTC  1053