BAC Information

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BAC

Clone NameB6Ng01-043O15
Chromosome7 (Build37)
Map Location 9,326,578 - 9,327,739
singlet/doubletsinglet
Overlap geneLOC100042795, LOC100042060
Upstream geneLOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539
Downstream geneEG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043O15.bB6Ng01-043O15.g
ACCDH869829DH869830
length1,1431,228
definitionDH869829|Mus musculus domesticus DNA, BAC clone: B6Ng01-043O15, 5' end.DH869830|Mus musculus domesticus DNA, BAC clone: B6Ng01-043O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaatccacaagatcctcgggtcctcatatgggctaccatatgt
tgcatctgctctcgaccagcaagaacgacatgacacagttggattctgtt
caacagcctttattgcaggaacgcctcgatgcttctatggggaccctggt
cacccagggagccctgcttatatgcaccccagcacaggagaaggctccgt
ggccccctggaattggtcagtttgccagcacccaatttgcatgcagtgca
aatttgcagtggtgttgtttataaaaacagcaaccagaaactggtgccat
cttggagttggcttcccacacttctgggggaatcaccattcctgacctta
agctgtacaacagagcaattgtgataaaaactgcatggtactggtatagc
aacatagaggtagatcaatggaatagaactgaagatgcagaaatgaaccc
acatatctatggtcacttaatctttgacaataaggtaaaaccatccagtg
gaaataagacagcattttcaaccaaaggtgatggatcaactagtggttag
catgtagggaatggtatatacaatatagggcaatgcttgtatgttaggta
aactcctttatgagaaaggcccaccttatgagtctgcttggggggcaaag
taattatgaaacagagagtgatagtgcaggaagactatgacatttttcac
tttgggaatctctcacaacaccttgggataaaggtgaagttaggaaagtt
cagccgatattttccacatggtgaatattttcacttatatgtagacatgt
tcaagttggctacagcaaagagaaaggtgagtgtgtactaacttattgat
ttataatacacagcagtaaacactgtcaagtggatacacattaacatatt
gaaatgaaaaaatactttaacatcaagaacatttctaagttcctatatta
tgtttattttgacattttcccaattctttgaagattcaaacatgcataaa
tatacctatgtcaatatcagactattttctgaaattaatgatacaactgt
ctcatcactgtttgatattctttcctttaataacaaataatttcacttgg
ttgcgtattacacaggatctaatccttaccttaaaccactgaa
gaattctctttaatagggacggggtttcgttttctctctctcttgcttct
tgctctcttgcttcttgcactctggctcctgaagatgtaagcaataaagc
tttgccgcagaagattctggtctgtggtgttcttcctggccgggcgtgag
aacgcgtctaataacaattggtgccgaattccgggacgagaaaaaaactc
gggactggcgcaaggaagatccctcattccagaaccagaactgcgggtcg
cggtaataaaggttcccgtaaagcagactgttaagaaggattcaactgta
tgaattcagaacttttcagctggggaacgagagtaccagtgagtacagct
ttacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtct
atcagaagtaaagtggaatatgtttggccttgaattttttctggtgttag
gagcccttttgttccttttcacatgttatcaagtgattaagatagggctg
aaaattctagaggaaattcaggacaagctatcagaagtaaagcggggaga
gagagtaggagcaaagagaaaatatggtacacaaaataagtatacaggcc
tttccaagggtcttgaacccgaggaaaagttaaggttaggtaggaatacc
tggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatca
attagcggaggtctctaggagatactcgtcactagatgagctcaggaagc
cagctcttagtagttctgaagcagatgaagaattctcctctgaggaaaca
gactgggaggaagaagcagcccattaccagccagctaattggtcaagaaa
aaagccaaaagcggctggcgaaagccagtttgctgattggcctcaggcag
tcgcttcaagtccgccctatgcgagtcctcgctctgcgtagtgcgtcagc
aatgcgcagagagcagtgcgcagaagagcagtgcgcagactcattcattc
ccaagagaggaacaaaggaaaatcacagcatttcgtctttgaagagccga
aggttggcgtgttccacgctccgtagaatactttacaatttaagaaattg
cgagtcgttcggtaaatatgaaccatgtctattttaacttgtgtcgttag
aacacgctccgcaatggctatctgctagatgcaacgtgttaagacgctct
ctctagatagatggcgcaaataaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9326578_9327739
seq2: B6Ng01-043O15.b_47_1189

seq1  GAATTCTGAATCCACAAGATCCTCGGGTCCTCATATGGGCTACCATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATCCACAAGATCCTCGGGTCCTCATATGGGCTACCATATGT  50

seq1  TGCATCTGCTCTCGACCAGCAAGAACGACATGACACAGTTGGATTCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGCTCTCGACCAGCAAGAACGACATGACACAGTTGGATTCTGTT  100

seq1  CAACAGCCTTTATTGCAGGAACGCCTCGATGCTTCTATGGGGACCCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCCTTTATTGCAGGAACGCCTCGATGCTTCTATGGGGACCCTGGT  150

seq1  CACCCAGGGAGCCCTGCTTATATGCACCCCAGCACAGGAGAAGGCTCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGGAGCCCTGCTTATATGCACCCCAGCACAGGAGAAGGCTCCGT  200

seq1  GGCCCCCTGGAATTGGTCAGTCTGCCAGCACCCAATTTGCATGCAGTGCA  250
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGCCCCCTGGAATTGGTCAGTTTGCCAGCACCCAATTTGCATGCAGTGCA  250

seq1  AATTTGCAGTGGTGTTGTTTATAAAAACAGCAACCAGAAACTGGTGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAGTGGTGTTGTTTATAAAAACAGCAACCAGAAACTGGTGCCAT  300

seq1  CTTGGAGTTGGCTTCCCACACTTCTGGGGGAATCACCATTCCTGACCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGTTGGCTTCCCACACTTCTGGGGGAATCACCATTCCTGACCTTA  350

seq1  AGCTGTACAACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTACAACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGC  400

seq1  AACATAGAGGTAGATCAATGGAATAGAACTGAAGATGCAGAAATGAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGAGGTAGATCAATGGAATAGAACTGAAGATGCAGAAATGAACCC  450

seq1  ACATATCTATGGTCACTTAATCTTTGACAATAAGGTAAAACCATCCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCTATGGTCACTTAATCTTTGACAATAAGGTAAAACCATCCAGTG  500

seq1  GAAATAAGACAGCATTTTCAACCAAAGGTGATGGATCAACTAGTGGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGACAGCATTTTCAACCAAAGGTGATGGATCAACTAGTGGTTAG  550

seq1  CATGTAGGGAATGGTATATACAATATAGGGCAATGCTTGTATGTTAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGGGAATGGTATATACAATATAGGGCAATGCTTGTATGTTAGGTA  600

seq1  AACTCCTTTATGAGAAAGGCCCACCTTATGAGTCTGCTTGGGGGGCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTTTATGAGAAAGGCCCACCTTATGAGTCTGCTTGGGGGGCAAAG  650

seq1  TAATTATGAAACAGAGAGTGATAGTGCAGGAAGACTATGACATTTTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGAAACAGAGAGTGATAGTGCAGGAAGACTATGACATTTTTCAC  700

seq1  TTTGGGAATCTCTCACAACACCTTGGGATAAAGGTGAAGTTAGGAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAATCTCTCACAACACCTTGGGATAAAGGTGAAGTTAGGAAAGTT  750

seq1  CAGCCGATATTTTCCACATGGTAAATATTTTCACTTATATGTAGACATGT  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGCCGATATTTTCCACATGGTGAATATTTTCACTTATATGTAGACATGT  800

seq1  TCAAGTTGGCTACAGCAAAGAGAAAGGTGAGTGTGTACTAACTTATTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGGCTACAGCAAAGAGAAAGGTGAGTGTGTACTAACTTATTGAT  850

seq1  TTATAATACACAGCAGTAAACACTGTCAAGTGGATACACATTAACATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATACACAGCAGTAAACACTGTCAAGTGGATACACATTAACATATT  900

seq1  GAAATGAAAAAAATACTTTAACATCAAGAAACAATTTCTAAGTTCCTATA  950
      |||||| |||||||||||||||||||||||   |||||||||||||||||
seq2  GAAATG-AAAAAATACTTTAACATCAAGAA--CATTTCTAAGTTCCTATA  947

seq1  TTATGTTTATTTTGACATTTTCCCCAATTCTTTGAAGATTCAAACATGCA  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTATGTTTATTTTGACATTTT-CCCAATTCTTTGAAGATTCAAACATGCA  996

seq1  TAAAATATACCTATGTC-ATATCAGAACTATTTTCTGAAATTTAATGAAT  1049
      | ||||||||||||||| ||||||| |||||||||||||| |||||| ||
seq2  T-AAATATACCTATGTCAATATCAG-ACTATTTTCTGAAA-TTAATG-AT  1042

seq1  ACAAACTGTTCTTCATCACTGTTTGATATTCTTTCCTTTAAATTAAACAA  1099
      || ||||||   |||||||||||||||||||||||||||||    |||||
seq2  AC-AACTGT--CTCATCACTGTTTGATATTCTTTCCTTTAA---TAACAA  1086

seq1  AATATTTTTCACTTTGTTGCTGTTATTACACAGTAATCTATTCCCTTACC  1149
      |  |  |||||||| |||||   ||||||||||  ||||| | |||||||
seq2  ATAA--TTTCACTTGGTTGC--GTATTACACAG-GATCTAAT-CCTTACC  1130

seq1  TTAAACCACTGAA  1162
      |||||||||||||
seq2  TTAAACCACTGAA  1143