BAC Information

Click to search

BAC

Clone NameB6Ng01-044C13
Chromosome7 (Build37)
Map Location 59,502,212 - 59,503,371
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044C13.bB6Ng01-044C13.g
ACCDH869994DH869995
length1,2041,138
definitionDH869994|Mus musculus domesticus DNA, BAC clone: B6Ng01-044C13, 5' end.DH869995|Mus musculus domesticus DNA, BAC clone: B6Ng01-044C13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccctcttcagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtatcttttgccttgcagaagctttgcagtctca
tgaggttccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctatgcccatatcttcgaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattcga
attcttctacatgataacgaccagttctgccagcaccatttgttgaaaat
gctatctttcttccactggatggttttagcttccttgtcgatgatcaagt
gacaataggtgtgtgggttcttttctgggtcttcaattctattccattgg
tctacttgtctgtcactataacagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcttaggtttttcgttattccagatg
aatttgcaaattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaacctgtaggttgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatccaacaaagatagagaacttcagaccaatttcccttatgaata
tagatgcaaaatcctcaataaaatctcgctacccgaatccaagacacatt
taagcaatcatccatcctgaccaagtagttttatcccagggatgcaggga
tgggttaatatatggaaatccatcaacgtaatctatttaataaaccaatc
tctaagacaaaaaccccttgatcctctagttaatgctgaaaaagcattcg
accaagattccacaccccattcagtataaagtcctgggtaagatcaggaa
atccatggccctatcctaccatgggaaaaagcaaactcacaccacactac
tgac
gaattccttaaagtgttttcatgaccacaacttgaatatgttattaatat
tgccaggagaagggtcagaaatagatgtgcttcacataatttcaaaggca
acttggtatgccagtgctatttttaaaattcagttattgttaaatgctgt
ggcaccagtgctctcaaaaaactcagaaaatcatattgtgtaatttgatg
agtatattcatgtctataaaaagaaatataattcattatattcataattc
atagaaattcataaaaagactaaatgagatagtccatagataatttgcta
gacttatttagctaatatttttttatttttttgtacatgtgagtgacata
ggtaagaagaaacactaaagcaatacttgcatctgtatatttatctatat
atccatagatagatagatagatagatagatagatagatagatattgatag
atacaaatatacatagataagtgacacatagatgatagatgtcatgcagt
gtaaataaatgaaatgggaacttggcgtaatataaaagtcacattttcta
tttcaaatgtgaatcaaagggcttatctcaaattttattctttcttaaat
tttaaaatatagtaatttcacgttcccaaccaaacacttgaaagtaggaa
cttaaatataaaatatagtaatgacctgtgtttctgatctataaattgca
atgtctgaagtattttgagatatctaataggagaaagcacttgcaaaaca
tatgtcatagaagggttgatattcaaagtgtaatgagtattgttaaatac
attcaaaatctctaatcttcaaggggatgtaaatccaaactgtatgaaat
gtcgccacatagctgttggcatgaatgttactaaaatgaaaataacaaat
tttcataaggatttaaatgaagtctctatattctttgggaatggaaattg
gcacagtataacccaaatgatatgaaatttcaacacacaatcaactcatg
tgtatcaccatctaatctggggctacttttgtgagatgagatgtttgcag
cattcaccatgatcatttccacttacacataaatcataaattctgcgatg
actgaaacagaaaggttccatacacggtatcagaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59502212_59503371
seq2: B6Ng01-044C13.g_68_1205 (reverse)

seq1  CCTTTCTGATTACCCTGTGTATGTGAACTTTCTTGTTTTCAGTCATCTGC  50
      ||||||||| ||||  |||||||  | ||||||   ||||||||||| ||
seq2  CCTTTCTGA-TACC--GTGTATGGAACCTTTCT--GTTTCAGTCATC-GC  44

seq1  AG-ATTTATGAATTTTATGTGTACAGTGGAAATGATCATGGTTGAAATTG  99
      || ||||||||  |||||||||| ||||||||||||||||| ||||    
seq2  AGAATTTATGA--TTTATGTGTA-AGTGGAAATGATCATGG-TGAA---T  87

seq1  GCTGCAAAACATCTTCATCTCACAAAAGTAGGCCCCAGATTAGATGGTGA  149
      ||||| ||||||| |||||||||||||||| |||||||||||||||||||
seq2  GCTGC-AAACATC-TCATCTCACAAAAGTA-GCCCCAGATTAGATGGTGA  134

seq1  TTACACATGGAGGTTTGATTGTGTGTTGAAATTTCATATCATTTTGGGTT  199
       ||||||| |||  ||||||||||||||||||||||||||| ||||||||
seq2  -TACACAT-GAG--TTGATTGTGTGTTGAAATTTCATATCA-TTTGGGTT  179

seq1  ATAACTGTGCCAATTTCCATTCCCAAAGAATATAGAGACTTCATTTAAAT  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-ACTGTGCCAATTTCCATTCCCAAAGAATATAGAGACTTCATTTAAAT  228

seq1  CCTTATGAAAATTTGTTATTTTTCATTTTAGTAACATTCATGCCAACAGC  299
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTTATGAAAATTTGTTA-TTTTCATTTTAGTAACATTCATGCCAACAGC  277

seq1  TATGTGGCGACATTTCATACAGTTTGGATTTACATCCCCTTGAAGATTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCGACATTTCATACAGTTTGGATTTACATCCCCTTGAAGATTAG  327

seq1  AGATTTTGAATGTATTTAACAATACTCATTACACTTTGAATATCAACCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGAATGTATTTAACAATACTCATTACACTTTGAATATCAACCCT  377

seq1  TCTATGACATATGTTTTGCAAGTGCTTTCTCCTATTAGATATCTCAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGACATATGTTTTGCAAGTGCTTTCTCCTATTAGATATCTCAAAAT  427

seq1  ACTTCAGACATTGCAATTTATAGATCAGAAACACAGGTCATTACTATATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGACATTGCAATTTATAGATCAGAAACACAGGTCATTACTATATT  477

seq1  TTATATTTAAGTTCCTACTTTCAAGTGTTTGGTTGGGAACGTGAAATTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTAAGTTCCTACTTTCAAGTGTTTGGTTGGGAACGTGAAATTAC  527

seq1  TATATTTTAAAATTTAAGAAAGAATAAAATTTGAGATAAGCCCTTTGATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAAAATTTAAGAAAGAATAAAATTTGAGATAAGCCCTTTGATT  577

seq1  CACATTTGAAATAGAAAATGTGACTTTTATATTACGCCAAGTTCCCATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGAAATAGAAAATGTGACTTTTATATTACGCCAAGTTCCCATTT  627

seq1  CATTTATTTACACTGCATGACATCTATCATCTATGTGTCACTTATCTATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTACACTGCATGACATCTATCATCTATGTGTCACTTATCTATG  677

seq1  TATATTTGTATCTATCAATATCTATCTATCTATCTATCTATCTATCTATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGTATCTATCAATATCTATCTATCTATCTATCTATCTATCTATC  727

seq1  TATCTATGGATATATAGATAAATATACAGATGCAAGTATTGCTTTAGTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATGGATATATAGATAAATATACAGATGCAAGTATTGCTTTAGTGT  777

seq1  TTCTTCTTACCTATGTCACTCACATGTACAAAAAAATAAAAAAATATTAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTACCTATGTCACTCACATGTACAAAAAAATAAAAAAATATTAG  827

seq1  CTAAATAAGTCTAGCAAATTATCTATGGACTATCTCATTTAGTCTTTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAGTCTAGCAAATTATCTATGGACTATCTCATTTAGTCTTTTTA  877

seq1  TGAATTTCTATGAATTATGAATATAATGAATTATATTTCTTTTTATAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCTATGAATTATGAATATAATGAATTATATTTCTTTTTATAGAC  927

seq1  ATGAATATACTCATCAAATTACACAATATGATTTTCTGAGTTTTTTGAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATACTCATCAAATTACACAATATGATTTTCTGAGTTTTTTGAGA  977

seq1  GCACTGGTGCCACAGCATTTAACAATAACTGAATTTTAAAAATAGCACTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGTGCCACAGCATTTAACAATAACTGAATTTTAAAAATAGCACTG  1027

seq1  GCATACCAAGTTGCCTTTGAAATTATGTGAAGCACATCTATTTCTGACCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCAAGTTGCCTTTGAAATTATGTGAAGCACATCTATTTCTGACCC  1077

seq1  TTCTCCTGGCAATATTAATAACATATTCAAGTTGTGGTCATGAAAACACT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGGCAATATTAATAACATATTCAAGTTGTGGTCATGAAAACACT  1127

seq1  TTAAGGAATTC  1160
      |||||||||||
seq2  TTAAGGAATTC  1138