BAC Information

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BAC

Clone NameB6Ng01-044E04
Chromosome7 (Build37)
Map Location 109,808,885 - 109,808,990
singlet/doubletsinglet
Overlap genenone
Upstream geneClpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555
Downstream geneOlfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044E04.bB6Ng01-044E04.g
ACCDH870068DH870069
length1,0241,165
definitionDH870068|Mus musculus domesticus DNA, BAC clone: B6Ng01-044E04, 5' end.DH870069|Mus musculus domesticus DNA, BAC clone: B6Ng01-044E04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcccagcaaccacatggtgactcccaactacctgtaatggg
atctgatgccctcttctggtgtgtctgaagacagtgacagtgtactcata
tacataaaataaataattcttttttaaaaaagaaaaaggaaaaaaagcta
gtggcctatagcaaaggcagaaagtagaaggaagaacgtctgggaagaga
taagaactctgggagagagacaactggccaccttcctggtgagagcccag
gggtctgcccagcccgagaggtttctgcctcaggctccagcaggagccac
cttggctccgggactccgaggagggcatgctgcacgggtgagggtgtgga
atacagaggccagcagtttctgggaaaggcgagagccatagaacttctga
ggcggcgccatcttcggctccagataaccggccaccttcctggcaagagc
cagagagcttctgaggcggcgccatcttcggctccagacaactggccacc
ttcctggtgagagcacaggggtccgcccggcccgagaagtttctgcctca
ggctccggcgggagccaccttggttccgggactccgcagagggcaggctg
cacggagagggtgtggaatacagaggccagcagtttctgggtcaggcgag
agccacagagcttctgaggcggcgccatcttcagctccagacaaccggcc
accttcctggccaaagcaacacagcttctgggaaagatcctgttttgggc
cttcatcttcagccaggaggaggtccaaacaccagataactgtgcacctt
ccctgaaagaggagagcttgcctgcagagactgctctgaccactgaaact
cagaggagagagctagtctcccacgtctgctgctagagggtaacaaaatc
accagaggaacaccctctaaacaaagacactataacaactaaatccagaa
ttgccagatggcgaaaggtaaacgtaagaatcctactaacagaacaggac
actcacatcatcagaacttagaat
gaattccatgaagggggcttcatggacctaataaacagaggctgctgcag
tgtgagccaccttgtcagaaagatattaaggaaggaaataacaagattta
gagagtggtgatttcatggcaagatcccaccagctaagtttattgtttgg
actactcaggcagattcctgaattcagggttagcttgggacagagctagt
tgaagcccaggagtggtggggatcccacccagctagcttattgtctttac
ttatagcaagcagatatctgaattcatttgccatgttttgttttattttg
ttttttaagaatttgctgttcttttattagaatcaagttgctacagtcat
aaaatgctgactcgtgggataaccaaaaaagaacctcaagaaaatgactg
aattgatatgcaaatgaaagactgggctttggtctgcaagagctaagcaa
cctggatgagctgtctggagagaaaacagagttcttttagaatttttttc
tagcagctacccagagagaactgcttggagagcaaatacaggtcttttac
aatctttttccttcaagagagcaaaagagagctgtctcaggcagaggaaa
ctgtctcatgcagaaagctgtcttgagcatactacagatccaagagctat
ctacagagagctgtctagggagccatcttgagcagattacaaggctaatc
agcttgtacccatgatttgacttttagtcatttttttggttggtggtgaa
cactctccttcctcagaaccctctccaagctgaggttgatccttagaaga
actcaagaagtcagataccaataatccaaataacctaattaaaatatgag
gtacagagcttaatagagaattttcaacaaaggatcttgatggctgaaaa
cacctaaagaaatgttcacatccttagtcatcagggaaatgcaatcaaaa
cactctgagattccacctacacctatcagatggctagatcaaaacttcaa
gacacacatgctgacaggtgtggagcagagatactcctacactgctgggg
gagacaacctgtacacccctctgggagtcacttggcagttgtcagaaatt
ggaagtcactcaggacagctttaccaacctgagctagtacctagagaagt
gccccactctaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109808885_109808990
seq2: B6Ng01-044E04.b_43_155 (reverse)

seq1  TTATTTATTTTATG----TGAGTCCA---TCACTGTCTTCAGACACACCA  43
      ||||||||||||||    ||||| ||   |||||||||||||||||||||
seq2  TTATTTATTTTATGTATATGAGTACACTGTCACTGTCTTCAGACACACCA  50

seq1  GAAGAGGTCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTT  93
      ||||||| |||||||||||||||||| | |||| ||| ||||||||||||
seq2  GAAGAGGGCATCAGATCCCATTACAGGTAGTTGGGAGTCACCATGTGGTT  100

seq1  GCTGGGATTTGAA  106
      ||||||| |||||
seq2  GCTGGGAATTGAA  113