BAC Information

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BAC

Clone NameB6Ng01-044N12
Chromosome7 (Build37)
Map Location 134,173,781 - 134,174,348
singlet/doubletsinglet
Overlap geneKif22
Upstream geneGsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz
Downstream gene1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044N12.b
ACCDH870482
length1,002
definitionDH870482|Mus musculus domesticus DNA, BAC clone: B6Ng01-044N12, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttccatcccgttctggacattttctgtcttctgttggaata
atgtttgtttggtgtttaagatttatttttatgtatattggttttattct
gacctttatgactgtgtatcacatgtgtgcaatgcctacagaggtcagaa
gaggttatcagatactctgggtctagagttaagagatagttatgaactgc
cccatattggtggaatcaaacctgggttctctggaatagtatacttagct
actgagccatctctctagcccctgcttgaatgcacttaacatgactgaag
cctaagaaacaactgagatcagataacagggggaagaaatccaaattaga
gaaatggctcagtggttaggagcccatgctgttctggcagaggacactaa
tccaattgccagcacccacatgaggcaacttccagcttcaggaagcaaac
atctctctgaggtctttgggtatatacatagactgcacacatacacaaga
tagtaaatatattaccagaggctagagacatgactcagcagttaagaaca
ctgactcaatttctagcaactacagagcagttcatgactgcctataattc
tatttccagaggacccatcactgtcttctgacctacaagggcaccaggca
catagcgcacagacatccatgcaggccaaacacccacacatataagtaaa
aatatataacctgcctaagtaggcaggcagctctttttgtgaattcgttt
ggcccaatctacatagtaagttctaggccagctgtggctacatagtgaga
ccttatcttaaaaaataaaaaagtaaaagaaaaaaaaatctaaggctgga
gagattgctcagaggttaagaatgctgggttttccttacagaggtcctga
gtacaggccccagcaacggcatgatggcggttcagaaccgtcttgcagtg
agattttggtgcctatgcaggtatacactgtataatcaaaaaaaaaatct
tt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134173781_134174348
seq2: B6Ng01-044N12.b_47_614 (reverse)

seq1  TGCTAGAAATTGAGTCAGTGTTCTTAACTGCTGAGTCATGTCTCTAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAATTGAGTCAGTGTTCTTAACTGCTGAGTCATGTCTCTAGCCT  50

seq1  CTGGTAATATATTTACTATCTTGTGTATGTGTGCAGTCTATGTATATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATATATTTACTATCTTGTGTATGTGTGCAGTCTATGTATATACC  100

seq1  CAAAGACCTCAGAGAGATGTTTGCTTCCTGAAGCTGGAAGTTGCCTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTCAGAGAGATGTTTGCTTCCTGAAGCTGGAAGTTGCCTCATG  150

seq1  TGGGTGCTGGCAATTGGATTAGTGTCCTCTGCCAGAACAGCATGGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTGGCAATTGGATTAGTGTCCTCTGCCAGAACAGCATGGGCTCC  200

seq1  TAACCACTGAGCCATTTCTCTAATTTGGATTTCTTCCCCCTGTTATCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACTGAGCCATTTCTCTAATTTGGATTTCTTCCCCCTGTTATCTGA  250

seq1  TCTCAGTTGTTTCTTAGGCTTCAGTCATGTTAAGTGCATTCAAGCAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTGTTTCTTAGGCTTCAGTCATGTTAAGTGCATTCAAGCAGGGG  300

seq1  CTAGAGAGATGGCTCAGTAGCTAAGTATACTATTCCAGAGAACCCAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAGATGGCTCAGTAGCTAAGTATACTATTCCAGAGAACCCAGGTT  350

seq1  TGATTCCACCAATATGGGGCAGTTCATAACTATCTCTTAACTCTAGACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCACCAATATGGGGCAGTTCATAACTATCTCTTAACTCTAGACCC  400

seq1  AGAGTATCTGATAACCTCTTCTGACCTCTGTAGGCATTGCACACATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATCTGATAACCTCTTCTGACCTCTGTAGGCATTGCACACATGTGA  450

seq1  TACACAGTCATAAAGGTCAGAATAAAACCAATATACATAAAAATAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTCATAAAGGTCAGAATAAAACCAATATACATAAAAATAAATCT  500

seq1  TAAACACCAAACAAACATTATTCCAACAGAAGACAGAAAATGTCCAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACCAAACAAACATTATTCCAACAGAAGACAGAAAATGTCCAGAAC  550

seq1  GGGATGGAAACTGAATTC  568
      ||||||||||||||||||
seq2  GGGATGGAAACTGAATTC  568