BAC Information

Click to search

BAC

Clone NameB6Ng01-045A19
Chromosome7 (Build37)
Map Location 94,490,356 - 94,653,427
singlet/doubletdoublet
Overlap geneNox4, Tyr
Upstream geneOlfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneGrm5, Ctsc, LOC100039756, Rab38
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045A19.bB6Ng01-045A19.g
ACCDH870620DH870621
length1,114597
definitionDH870620|Mus musculus domesticus DNA, BAC clone: B6Ng01-045A19, 5' end.DH870621|Mus musculus domesticus DNA, BAC clone: B6Ng01-045A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,652,301 - 94,653,427)(94,490,356 - 94,490,952)
sequence
gaattctcaacaaacgaatctcaaatggctgagaagcacttaaaattttt
ttcaccatccttaatcatcaaggaaatgcaaatcaaaatggccctgagat
tcaacctcacataaatcagaatgactaagatcaaaaactcaagcaacagt
acgtgctggtgaggatgtgaagaaagaggaacactccttctttgctggtg
ggattgtaagatggtttaatctcattttttaatagtctgtagcacttgcc
aaagcaattataataacttatattttacagatgagaaaacttacacaatt
tatttgctgaaagtcacacacaagagaaaagcaccaaaatttaattaatt
aattaaaaacaataataacaacaacaacaacaagacgtttgcagtaattt
atgagctaccaggacaaccactctaaaccagagcagtcaggtttttactt
gactttattgtaggcccattttccaaggcctttccttatttgtttctttg
attggttatttgcctcgaatttattgagtccaaaaccaagttgagtataa
cattagaaaacacctcaatcagataggcaaggagaacattggttttaatt
tgaatgcatgagcccactgacagcatgttttagactactataaaaggttt
tccaggataatataaaacttcaaaataaaagaaaatccaagcatttctta
cttataaaatcgtgcattaattttccattacaatgaacaaaattcaatta
tactgcttttatcatttttgtgagtctcttgacaataaaattttgatgaa
cattccaattaatgtgttaaataaaaagaagataaaaatgtttccatgac
ccgttttttaaatggaggaaaatatggaaaatggaaaatgtcaaagaagt
cttcccttccctgacatcttcagtaataataataataataatgataataa
taatcatatgcaaactagagcattgtactgcaggtgtcataatttgagct
cagtagaggaattgttatatttccacataacaacacactgaaatcttgta
cattttctaagcatcttacggttactagaattgactggagagcctttctc
ttgttgaacagatt
gaattctgtatataaaggaaaagaacaaaaatataatttaatccataagt
gcaaggaaaagctttatgatagtttgtaactatctattgtgtatgatctt
tttcctctgagacctttgtgatcacaagtagctcattaaaaattaattac
ctcaatatttattttaattacctccacttgagcaggaaatatggtcaatt
ttgcacccattgtaaattgtgctaaaatattggtagagatgcaagatcat
tctattcagagagttaaattctgtctaaaataatggaaatttccacataa
tagaggtaaacatgcatgtagaggagcccaaaataattgtgtcactcact
gacataatatttcaagaggagatttagtttccaggaaacaacagagttac
aattattgaaagaaaaatgagaacatcctcctctgagatcagaaatcact
gagtttttctccaaaattaaaattatgagcagaatactatttctagaagt
gccaaagaaaaacttaataagaatgtgaacattggaagcttttaaaaagt
gatattgtatattcgtttgtgtgtacaggcatcagtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94652301_94653427
seq2: B6Ng01-045A19.b_30_1143 (reverse)

seq1  AATCTGTTCAGCATTGAGAAGGCTTTTCCAGTCAAATACTAGTAAACGTT  50
      |||||||||| ||  ||||| |  | ||||||| ||| ||||||| ||| 
seq2  AATCTGTTCAACA-AGAGAAAGGCTCTCCAGTC-AATTCTAGTAACCGTA  48

seq1  AGATGCTATGAGAAATGTTACAAGATTTTCAGTGTTGTTGTTATTGGTTG  100
      |||||||  || ||||| ||||||| |||||||| |||||||||    ||
seq2  AGATGCTTAGA-AAATG-TACAAGA-TTTCAGTG-TGTTGTTAT---GTG  91

seq1  GAAATATAACAATTCCTCTTACTTGAGCTCAAAATATGACATCCTGCAGT  150
      |||||||||||||||||| ||| |||||||||| ||||||| ||||||||
seq2  GAAATATAACAATTCCTC-TAC-TGAGCTCAAATTATGACA-CCTGCAGT  138

seq1  ACATTGCTCTAGTTTGCATATGATTATTATTATCATTATTATTATTATTA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTCTAGTTTGCATATGATTATTATTATCATTATTATTATTATTA  188

seq1  TTACTGAAGATGTCAGGGAAGGGAAGACTTCTTTGACATTTTCCATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAAGATGTCAGGGAAGGGAAGACTTCTTTGACATTTTCCATTTTC  238

seq1  CATATTTTTCCTCCATTTAAAAAACGGGTCATGGAAACATTTTTATCTTC  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CATA-TTTTCCTCCATTTAAAAAACGGGTCATGGAAACATTTTTATCTTC  287

seq1  TTTTTATTTAACACATTAATTGGAATGTTCATCAAAATTTTATTGTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTAACACATTAATTGGAATGTTCATCAAAATTTTATTGTCAAG  337

seq1  AGACTCACAAAAATGATAAAAGCAGTATAATTGAATTTTGTTCATTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACAAAAATGATAAAAGCAGTATAATTGAATTTTGTTCATTGTAA  387

seq1  TGGAAAATTAATGCACGATTTTATAAGTAAGAAATGCTTGGATTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATTAATGCACGATTTTATAAGTAAGAAATGCTTGGATTTTCTTT  437

seq1  TATTTTGAAGTTTTATATTATCCTGGAAAACCTTTTATAGTAGTCTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAAGTTTTATATTATCCTGGAAAACCTTTTATAGTAGTCTAAAA  487

seq1  CATGCTGTCAGTGGGCTCATGCATTCAAATTAAAACCAATGTTCTCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTCAGTGGGCTCATGCATTCAAATTAAAACCAATGTTCTCCTTG  537

seq1  CCTATCTGATTGAGGTGTTTTCTAATGTTATACTCAACTTGGTTTTGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGATTGAGGTGTTTTCTAATGTTATACTCAACTTGGTTTTGGAC  587

seq1  TCAATAAATTCGAGGCAAATAACCAATCAAAGAAACAAATAAGGAAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATTCGAGGCAAATAACCAATCAAAGAAACAAATAAGGAAAGGC  637

seq1  CTTGGAAAATGGGCCTACAATAAAGTCAAGTAAAAACCTGACTGCTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAATGGGCCTACAATAAAGTCAAGTAAAAACCTGACTGCTCTGG  687

seq1  TTTAGAGTGGTTGTCCTGGTAGCTCATAAATTACTGCAAACGTCTTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTGGTTGTCCTGGTAGCTCATAAATTACTGCAAACGTCTTGTTG  737

seq1  TTGTTGTTGTTATTATTGTTTTTAATTAATTAATTAAATTTTGGTGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTATTATTGTTTTTAATTAATTAATTAAATTTTGGTGCTTT  787

seq1  TCTCTTGTGTGTGACTTTCAGCAAATAAATTGTGTAAGTTTTCTCATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTGTGTGACTTTCAGCAAATAAATTGTGTAAGTTTTCTCATCTG  837

seq1  TAAAATATAAGTTATTATAATTGCTTTGGCAAGTGCTACAGACTATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAAGTTATTATAATTGCTTTGGCAAGTGCTACAGACTATTAAA  887

seq1  AAATGAGATTAAACCATCTTACAATCCCACCAGCAAAGAAGGAGTGTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGATTAAACCATCTTACAATCCCACCAGCAAAGAAGGAGTGTTCC  937

seq1  TCTTTCTTCACATCCTCACCAGCACGTACTGTTGCTTGAGTTTTTGATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCACATCCTCACCAGCACGTACTGTTGCTTGAGTTTTTGATCT  987

seq1  TAGTCATTCTGATTTATGTGAGGTTGAATCTCAGGGCCATTTTGATTTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTCTGATTTATGTGAGGTTGAATCTCAGGGCCATTTTGATTTGC  1037

seq1  ATTTCCTTGATGATTAAGGATGGTGAAAAAAATTTTAAGTGCTTCTCAGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTGATGATTAAGGATGGTGAAAAAAATTTTAAGTGCTTCTCAGC  1087

seq1  CATTTGAGATTCGTTTGTTGAGAATTC  1127
      |||||||||||||||||||||||||||
seq2  CATTTGAGATTCGTTTGTTGAGAATTC  1114

seq1: chr7_94490356_94490952
seq2: B6Ng01-045A19.g_65_661

seq1  GAATTCTGTATATAAAGGAAAAGAACAAAAATATAATTTAATCCATAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATATAAAGGAAAAGAACAAAAATATAATTTAATCCATAAGT  50

seq1  GCAAGGAAAAGCTTTATGATAGTTTGTAACTATCTATTGTGTATGATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAAAAGCTTTATGATAGTTTGTAACTATCTATTGTGTATGATCTT  100

seq1  TTTCCTCTGAGACCTTTGTGATCACAAGTAGCTCATTAAAAATTAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTGAGACCTTTGTGATCACAAGTAGCTCATTAAAAATTAATTAC  150

seq1  CTCAATATTTATTTTAATTACCTCCACTTGAGCAGGAAATATGGTCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATATTTATTTTAATTACCTCCACTTGAGCAGGAAATATGGTCAATT  200

seq1  TTGCACCCATTGTAAATTGTGCTAAAATATTGGTAGAGATGCAAGATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCCATTGTAAATTGTGCTAAAATATTGGTAGAGATGCAAGATCAT  250

seq1  TCTATTCAGAGAGTTAAATTCTGTCTAAAATAATGGAAATTTCCACATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCAGAGAGTTAAATTCTGTCTAAAATAATGGAAATTTCCACATAA  300

seq1  TAGAGGTAAACATGCATGTAGAGGAGCCCAAAATAATTGTGTCACTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTAAACATGCATGTAGAGGAGCCCAAAATAATTGTGTCACTCACT  350

seq1  GACATAATATTTCAAGAGGAGATTTAGTTTCCAGGAAACAACAGAGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAATATTTCAAGAGGAGATTTAGTTTCCAGGAAACAACAGAGTTAC  400

seq1  AATTATTGAAAGAAAAATGAGAACATCCTCCTCTGAGATCAGAAATCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGAAAGAAAAATGAGAACATCCTCCTCTGAGATCAGAAATCACT  450

seq1  GAGTTTTTCTCCAAAATTAAAATTATGAGCAGAATACTATTTCTAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTCTCCAAAATTAAAATTATGAGCAGAATACTATTTCTAGAAGT  500

seq1  GCCAAAGAAAAACTTAATAAGAATGTGAACATTGGAAGCTTTTAAAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGAAAAACTTAATAAGAATGTGAACATTGGAAGCTTTTAAAAAGT  550

seq1  GATATTGTATATTCGTTTGTGTGTACAGGCATCAGTGTGTGTGTGTG  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGTATATTCGTTTGTGTGTACAGGCATCAGTGTGTGTGTGTG  597