BAC Information

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BAC

Clone NameB6Ng01-045L05
Chromosome7 (Build37)
Map Location 27,189,211 - 27,190,148
singlet/doubletsinglet
Overlap genenone
Upstream geneBC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c
Downstream geneLOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045L05.bB6Ng01-045L05.g
ACCDH871079DH871080
length9521,148
definitionDH871079|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L05, 5' end.DH871080|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcctgcatctctaacatcaggtgagagctgatgtgtgtaaggc
ttttctcacaaagtcaccacactatctgactgatctatgtcaacaggaat
attactatacctaatttccaaagtatttgaaggtatcagagaagaggcta
gagttgagaagacagatgcctggtcaacacaaattttaatcactttccta
tgttgccccactgcagtgttactcaaacttactaatgctgtcaccattta
atagttcctcatgttataatgatgcctctacccataaaattattttcatt
gctacatcataactgtaattttggtactgtaaatatctgtgtcttccaag
tgtcttgggtaacccctgtgaaaacatcattcaactcccaagtaggttta
aactcacaggttgagaaccatgtgtctacaggaacactgttcaggcagtg
gacaggtgtgactgaactttatttagggaaatagagattagaagcttctg
aatcctctctacaagatctgaaccaacaagtgctttacacctgccttgaa
attctgtccaaatttcctcacattgcatctctaaatgatacctagctatg
tcagatagcacattacaagaaatacatcttgatgtctttttaaaacatga
tattatatttatttgttgggagccatgcacttgtctatgtcagaggacaa
cttggaggagtcagtactcttgttccacctatatctcccagtgatttaac
tcagattgtcaagcttggtagcaagcgcctctacccactgagtcgtctca
ctggcccttgttatccctttcgttttatacttattatctaagggctggtg
agattgttaagtggatagagcattttcagaagaacactacaagtcttagt
taattcccatactggtcataaaggtagatgggagatcaagtctcaactgt
cc
gaattctctactgaggaataccgaatggctgagtagcacctcattcgcaa
aacatatgaaacttgagaagaaggaaggctaaagtgtggatactttgatc
cttcttagaatagggaacaaaatccacatggacggagttacagagacaaa
gtgtgaagcagagacagaaggaacgaccatccagtgactgctctacctgg
ggatccattccaaaaacaaccaccaaaaccagacactattgtggacgcca
acaagagcttgctgacaagagtctgatatagatgtctcctgagagactct
gcctgtgtctgataaatagagaagtagatgctcacagacatccattggaa
ggagcacagagtccccaatggaggagcttgagaaagcacccaaggggctg
atggggtttacagccccataggaggaacaacaatataaactaaccagtat
cttcagagctccctgggactaaaccaccaaccaaagaaagcacatggagg
gacttgtggctctagctgcatatgtaacagaggatggcctagttgttcag
caatgggaagagaggtccttggtcctgtcaaggctctatggtccagtact
ggggaattccatggccagaaagccagagtgtgtaggttggtgagcaggga
tagagaaaggggaaaccaggaaagaggttaacatttgaaatgtaaatgaa
gaaaatacctaataaaaagtaataaaaaaagaaaggactttctattttca
ttgaggcataaaaatcatactcatcaataggaagtttttgcaaacgttca
gtacttttgttcactgggtaatgttaagccacagaataacaccctttctc
caaaaatatttcttttgtagtgaaacatcaaaatccttcagaggttttga
aacatatgccattatttatctttaatccagccaagtgtgaatagacacca
gatctttttatattttaaaaattatttacttttcttcaatagatacttta
tgtcagcaatcgattactaatagtataatatatggatgcttatatgctta
acaatatgaaaagtggaaatttcactggtaactcctcccccgatgaaaaa
gaaaataataagtccattctcatggatacatacaccaatgtatttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27189211_27190148
seq2: B6Ng01-045L05.b_40_971

seq1  GAATTCCTCCTGCATCTCTAACATCAGGTGAGAGCTGATGTGTGTAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGCATCTCTAACATCAGGTGAGAGCTGATGTGTGTAAGGC  50

seq1  TTTTCTCACAAAGTCACCACACTATCTGACTGATCTATGTCAACAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCACAAAGTCACCACACTATCTGACTGATCTATGTCAACAGGAAT  100

seq1  ATTACTATACCTAATTTCCAAAGTATTTGAAGGTATCAGAGAAGAGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTATACCTAATTTCCAAAGTATTTGAAGGTATCAGAGAAGAGGCTA  150

seq1  GAGTTGAGAAGACAGATGCCTGGTCAACACAAATTTTAATCACTTTCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAGAAGACAGATGCCTGGTCAACACAAATTTTAATCACTTTCCTA  200

seq1  TGTTGCCCCACTGCAGTGTTACTCAGACTTACTAATGCTGTCACCATTTA  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTTGCCCCACTGCAGTGTTACTCAAACTTACTAATGCTGTCACCATTTA  250

seq1  ATAGTTCCTCATGTTATAATGATGCCTCTACCCATAAAATTATTTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCCTCATGTTATAATGATGCCTCTACCCATAAAATTATTTTCATT  300

seq1  GCTACATCATAACTGTAATTTTGGTACTGTAAATATCTGTGTCTTCCAGG  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTACATCATAACTGTAATTTTGGTACTGTAAATATCTGTGTCTTCCAAG  350

seq1  TGTCTTGGGTAACCCCTGTGAAAACATCATTCAACTCCCAAGTAGGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGGTAACCCCTGTGAAAACATCATTCAACTCCCAAGTAGGTTTA  400

seq1  AACTCACAGGTTGAGAACCATGTGTCTACAGGAACACTGTTCAGGCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACAGGTTGAGAACCATGTGTCTACAGGAACACTGTTCAGGCAGTG  450

seq1  GACAGGTGTGACTGAACTTTATTTAGGGAAATAGAGATTAGAAGCTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTGTGACTGAACTTTATTTAGGGAAATAGAGATTAGAAGCTTCTG  500

seq1  AATCCTCTCTACAAGATCTGAACCAACAAGTGCTTTACACCTGCCTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTCTACAAGATCTGAACCAACAAGTGCTTTACACCTGCCTTGAA  550

seq1  ATTCTGTCCAGATTTCCTCACATTGCATCTCTAAATGATACCTAGCTATG  600
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCCAAATTTCCTCACATTGCATCTCTAAATGATACCTAGCTATG  600

seq1  TCAGATAGCACATTACAAGAAATACATCTTGATGTCTTTTTAAAACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGCACATTACAAGAAATACATCTTGATGTCTTTTTAAAACATGA  650

seq1  TATTATATTTATTTGTTGGGAGCCATGCACTTGTCTATGTCAGAGGACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATTTATTTGTTGGGAGCCATGCACTTGTCTATGTCAGAGGACAA  700

seq1  CTTGTAGGAGTCAGTACTCTTGTTCCACCTATATCTCCCAGTGATTAAAC  750
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTGGAGGAGTCAGTACTCTTGTTCCACCTATATCTCCCAGTGATTTAAC  750

seq1  TCAGATTGTCATGCTTGGTAGCAAGCGCCTCTACCCACTGAGTCGTCTCA  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTGTCAAGCTTGGTAGCAAGCGCCTCTACCCACTGAGTCGTCTCA  800

seq1  CTGGCCCCTTGTTTTCCCTTTCGTTTTTATACTTATTATCTTAAGGGCTG  850
      |||| |||||||| ||||||||| |||||||||||||||| |||||||||
seq2  CTGG-CCCTTGTTATCCCTTTCG-TTTTATACTTATTATC-TAAGGGCTG  847

seq1  GTGAGATTGTTTAGTGGATAGAGCATTTTCTGAAGAAACACTAACAGTCT  900
      ||||||||||| |||||||||||||||||| |||| |||||||  |||||
seq2  GTGAGATTGTTAAGTGGATAGAGCATTTTCAGAAG-AACACTACAAGTCT  896

seq1  GAGTTTAATTCCCAGAACTGTCATAAAAGGTAGATGGG  938
       || |||||||||| |   ||||| |||||||||||||
seq2  TAG-TTAATTCCCATACTGGTCAT-AAAGGTAGATGGG  932