BAC Information

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BAC

Clone NameB6Ng01-046L13
Chromosome7 (Build37)
Map Location 142,209,102 - 142,342,651
singlet/doubletdoublet
Overlap geneDock1
Upstream geneAdam12, A130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750, B830028B13Rik, EG668693
Downstream geneLOC100043254, Foxi2, Clrn3, Ptpre, Mki67, LOC668764
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046L13.bB6Ng01-046L13.g
ACCDH871798DH871799
length3431,142
definitionDH871798|Mus musculus domesticus DNA, BAC clone: B6Ng01-046L13, 5' end.DH871799|Mus musculus domesticus DNA, BAC clone: B6Ng01-046L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,342,309 - 142,342,651)(142,209,102 - 142,210,250)
sequence
cttatgcagatggcagctttcccagggcttgctaccatgcactcaggact
ggcctaagaaatgttcattgctggtcttttgcttcctgagttctgactgg
aggtaggggagtttgaaggggcggtggtggtgacaaggacctgctgggac
atctttgggtggcatggcaaatgtgttgtccgtggaaaagggaaggcaaa
cctgtgtgggaaggctgtctctaggtgacaccgcagtcattcttgatgct
aagagctgttctgatttagaataacttgtttcaaatgtgcaaaacttgat
ccaatcaccccggggtttgtggtggcggaggtggtgagggttg
gaattcaggtagatcttctgtccgtgactgcttgagaattttgtgcctgt
aggacaaggtgtgcagtgtggatatgcagctctgtccttccaatatgtct
gccatctgcctggtgctgctccagagctggagagagggctctccttctcc
tatctcccttccattcgggtatttcacaggctggagagacagctcagttg
acaaagtgagttctgtctccagaacccatgtaaaaatgctcagtttagtt
gagcaagctcataatcacagggctggattgtgctgaattcaggtagaacc
ttggagctggcagccagccagttaagcctatttactgggtaggccagtga
caacccctcacctgcagaagatagactgtggttttgaggatgacaactca
agttgtcctctgacctccacatagaggtgtgtatacacacacacaaacac
aaacacacacacacacacacacatacacacacacacattaaaacagaaca
ttttcagctctttcatttctaaaaagtgcaaaaacaatgtctcagcctgg
gtccatgtttctttcttgagttagcagtagccaatactgtttagtttagc
cagctcttcctttgaaatttacagtaaggccacatttaatatatttccat
ttagcaagtatttgttctcaataactgccttggctctttatttgatttgg
ggaaagggggcctggtcctctatattttcagtgtggctagaagtaaagac
tccagggctttgcccctgatgtaattttatttttaaattgaaaagtgaat
ttatttaatgtcctccaagaagcaaattcacaaagcttggcccgccctaa
aatgcgctgccaaagttgtaattggtaagaagttagcaagaagagggatt
agcttgttgagccatggcgtagcaaattgtcatggtcctgagtagtttgt
ggcttgtagaaaatgatcctgagtttagtatgcatcccatgcagtacatt
aggaagcccaacatgaagaggactctttgcaggagaatttgtaaatggga
tattttttacctttctagagggagcatatggagacttattcagattgttc
tagagaaagtctcctggtggtcaggaagctggtcctacctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_142342309_142342651
seq2: B6Ng01-046L13.b_50_392 (reverse)

seq1  CAACCCTCACCACCTCCGCCACCACAAACCCCGGGGTGATTGGATCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTCACCACCTCCGCCACCACAAACCCCGGGGTGATTGGATCAAGT  50

seq1  TTTGCACATTTGAAACAAGTTATTCTAAATCAGAACAGCTCTTAGCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACATTTGAAACAAGTTATTCTAAATCAGAACAGCTCTTAGCATCA  100

seq1  AGAATGACTGCGGTGTCACCTAGAGACAGCCTTCCCACACAGGTTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACTGCGGTGTCACCTAGAGACAGCCTTCCCACACAGGTTTGCCT  150

seq1  TCCCTTTTCCACGGACAACACATTTGCCATGCCACCCAAAGATGTCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTCCACGGACAACACATTTGCCATGCCACCCAAAGATGTCCCAG  200

seq1  CAGGTCCTTGTCACCACCACCGCCCCTTCAAACTCCCCTACCTCCAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTGTCACCACCACCGCCCCTTCAAACTCCCCTACCTCCAGTCA  250

seq1  GAACTCAGGAAGCAAAAGACCAGCAATGAACATTTCTTAGGCCAGTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGAAGCAAAAGACCAGCAATGAACATTTCTTAGGCCAGTCCTG  300

seq1  AGTGCATGGTAGCAAGCCCTGGGAAAGCTGCCATCTGCATAAG  343
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGGTAGCAAGCCCTGGGAAAGCTGCCATCTGCATAAG  343

seq1: chr7_142209102_142210250
seq2: B6Ng01-046L13.g_67_1208

seq1  GAATTCAGGTAGATCTTCTGTCCGTGACTGCTTGAGAATTTTGTGCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTAGATCTTCTGTCCGTGACTGCTTGAGAATTTTGTGCCTGT  50

seq1  AGGACAAGGTGTGCAGTGTGGATATGCAGCTCTGTCCTTCCAATATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGGTGTGCAGTGTGGATATGCAGCTCTGTCCTTCCAATATGTCT  100

seq1  GCCATCTGCCTGGTGCTGCTCCAGAGCTGGAGAGAGGGCTCTCCTTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTGCCTGGTGCTGCTCCAGAGCTGGAGAGAGGGCTCTCCTTCTCC  150

seq1  TATCTCCCTTCCATTCGGGTATTTCACAGGCTGGAGAGACAGCTCAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCCTTCCATTCGGGTATTTCACAGGCTGGAGAGACAGCTCAGTTG  200

seq1  ACAAAGTGAGTTCTGTCTCCAGAACCCATGTAAAAATGCTCAGTTTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTCTGTCTCCAGAACCCATGTAAAAATGCTCAGTTTAGTT  250

seq1  GAGCAAGCTCATAATCACAGGGCTGGATTGTGCTGAATTCAGGTAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGCTCATAATCACAGGGCTGGATTGTGCTGAATTCAGGTAGAACC  300

seq1  TTGGAGCTGGCAGCCAGCCAGTTAAGCCTATTTACTGGGTAGGCCAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGGCAGCCAGCCAGTTAAGCCTATTTACTGGGTAGGCCAGTGA  350

seq1  CAACCCCTCACCTGCAGAAGATAGACTGTGGTTTTGAGGATGACAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCTCACCTGCAGAAGATAGACTGTGGTTTTGAGGATGACAACTCA  400

seq1  AGTTGTCCTCTGACCTCCACATAGAGGTGTGTATACACACACACAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCTCTGACCTCCACATAGAGGTGTGTATACACACACACAAACAC  450

seq1  AAACACACACACACACACACACATACACACACACACATTAAAACAGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACACACACACACACACATACACACACACACATTAAAACAGAACA  500

seq1  TTTTCAGCTCTTTCATTTCTAAAAAGTGCAAAAACAATGTCTCAGCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGCTCTTTCATTTCTAAAAAGTGCAAAAACAATGTCTCAGCCTGG  550

seq1  GTCCATGTTTCTTTCTTGAGTTAGCAGTAGCCAATACTGTTTAGTTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGTTTCTTTCTTGAGTTAGCAGTAGCCAATACTGTTTAGTTTAGC  600

seq1  CAGCTCTTCCTTTGAAATTTACAGTAAGGCCACATTTAATATATTTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTTCCTTTGAAATTTACAGTAAGGCCACATTTAATATATTTCCAT  650

seq1  TTAGCAAGTATTTGTTCTCAATAACTGCCTTGGCTCTTTATTTGATTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGTATTTGTTCTCAATAACTGCCTTGGCTCTTTATTTGATTTGG  700

seq1  GGAAAGGGGGCCTGGTCCTCTATATTTTCAGTGTGGCTAGAAGTAAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGGGCCTGGTCCTCTATATTTTCAGTGTGGCTAGAAGTAAAGAC  750

seq1  TCCAGGGCTTTGCCCCTGATGTAATTTTATTTTTAAATTGAAAAGTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGCTTTGCCCCTGATGTAATTTTATTTTTAAATTGAAAAGTGAAT  800

seq1  TTATTTAATGTCCTCCAAGAAGCAAATTCACAAAGCTTGG-CCGCCCTAA  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTATTTAATGTCCTCCAAGAAGCAAATTCACAAAGCTTGGCCCGCCCTAA  850

seq1  AATGCGCTGCCAAAGTTGTAATTGGTAAGAAGTTAGCAAGAAAGAGGGAT  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATGCGCTGCCAAAGTTGTAATTGGTAAGAAGTTAGCAAG-AAGAGGGAT  899

seq1  TAGCTTGTTGAGCCATGGCGTAGCAAATTGTCATGGTCCTGAGTAGTTTT  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAGCTTGTTGAGCCATGGCGTAGCAAATTGTCATGGTCCTGAGTAG-TTT  948

seq1  GTGGCTTGTTAAGAAAATGATCCTGAGTTTAGTATGCATCCCCATGCAGT  999
      |||||||||  |||||||||||||||||||||||||||| ||||||||||
seq2  GTGGCTTGT--AGAAAATGATCCTGAGTTTAGTATGCAT-CCCATGCAGT  995

seq1  AACATTAGAAAGCCCCAACATGAAGA-GACTCTTTGCAGGGAGAATTTGT  1048
       ||||||| ||| ||||||||||||| ||||||||||| |||||||||||
seq2  -ACATTAGGAAG-CCCAACATGAAGAGGACTCTTTGCA-GGAGAATTTGT  1042

seq1  AAAT-GGATATTTTTTAACTTTCCTAGA-GGAGCATATGAGGACTTATTC  1096
      |||| |||||||||||| |||| ||||| ||||||||||  |||||||| 
seq2  AAATGGGATATTTTTTACCTTT-CTAGAGGGAGCATATGGAGACTTATT-  1090

seq1  CAGATTG-TCTAGGAAGAAAGTCTCCCTGTTGGCCAGGAAGCT-GTGCTA  1144
      ||||||| |||||  ||||||||| |||| ||| ||||||||| || |||
seq2  CAGATTGTTCTAG--AGAAAGTCT-CCTGGTGGTCAGGAAGCTGGTCCTA  1137

seq1  CCTAT  1149
      |||||
seq2  CCTAT  1142