BAC Information

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BAC

Clone NameB6Ng01-046L17
Chromosome7 (Build37)
Map Location 87,773,219 - 87,907,793
singlet/doubletdoublet
Overlap geneCrtc3, Iqgap1
Upstream gene5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm
Downstream geneLOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046L17.bB6Ng01-046L17.g
ACCDH871806DH871807
length6471,103
definitionDH871806|Mus musculus domesticus DNA, BAC clone: B6Ng01-046L17, 5' end.DH871807|Mus musculus domesticus DNA, BAC clone: B6Ng01-046L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,907,147 - 87,907,793)(87,773,219 - 87,774,334)
sequence
gaattctcactgaagcaagagtcactgtctgagtcattttcatgaggctt
gtttaaaatgtcttattacctaaaacttacgagtgtgaaggacttactgg
tgtgaataccatgttatattaacatctatgtctcggcatacattagcttt
gggccacaactgggacatgaaattccagcctaagggaaatctttcatcct
attgtacctctcactgtgacacgaaagtatgctggggtaacagtcccggt
gaggggggcctctcttctcagtctcacccctccacctgagctacagctgc
tgtggcacgaggcctcactctttgcatgttggtgtcttctagtttgtacc
tgttcaaactgggcctggctcctcagattcaagacctgtatggaaaggtt
gatttcacaggtaaggagttcagaggcttgtggaaaatgtatgactcatt
cggtaatcgcctggaaagttcaacagtgcctgtcttaaaggagaagggct
ctaggaaatactccacacggaaggtgggcggaacataagtgatctgccct
tgtcagtgtggggggaagagcagggcctgggaattgcaaactgctctttc
gctacatggggacggctggtggatttaaggtttttggtttttttttt
gaattcccacgatcctacatcattcttatgtgccctgacggacaccatgt
aacagagagaactagaagtcactgcagccctgtgggctggatctgtccag
tggggagagctgggagaagtcaacactccccagaaccactgtcctcacct
ctcagcagagagagacctagaggccatgatggccaggaaagctgggcttc
ctctctacatccctgctgttcctcacaggagtattctcctgcatatgtta
gcatggccactgagtggacgagcctgggctacatgagtcgcagcagtgga
ctcttgggcaacttactctgatatcttagttttctcgtgggaaaactgag
ggttaaaaaacaaacgactcattgaattctgaggactaaatgacatataa
attgcctagcacagtgtctggcatgggtaggtgctcagtaaacatgagtg
ccctcccccacttcctggtttctaagcttatgaagccaactctgccatca
ctgccaggaatcagctctctgcagggagactcgccccgcccatctgctcc
ttcctccgccaggcttgtcctgagctcagtgaagtgagagaagcttcctc
acttctgcctctccttgtcctaaccagcaggctcggtttgtctgccccaa
ccctcagtactgtgctggccccactcagaaagccaccctagcctggcccc
tgtccgactcccaacagacagtgctgagctcagccggtcgggctcacagc
tcctttcttcattactcagccacacagagtgcgctggtacatctctgttt
aggaggcttcctaaacgcccactttacatcttacctgtcatttactgagt
ctgagactagacagacagacagtcttgtaagatttcctctttcagttcca
aagcagtcatcagtcaacaaacacaaacacatggatctgcctgggtttgg
ctagacagctacatctttctagtgattcaaagtcaagctatactgctgat
ttctgaagaaacgtcaagatgccttgttccaccagacctgaatgctagtc
gggtcaggtacggaacttaccgacgctcctcataaatcccacgaccgagc
tct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87907147_87907793
seq2: B6Ng01-046L17.b_43_689 (reverse)

seq1  AAAAAAAAAACCAAAAACCTTAAATCCACCAGCCGTCCCCATGTAGCGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACCAAAAACCTTAAATCCACCAGCCGTCCCCATGTAGCGAA  50

seq1  AGAGCAGTTTGCAATTCCCAGGCCCTGCTCTTCCCCCCACACTGACAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTTTGCAATTCCCAGGCCCTGCTCTTCCCCCCACACTGACAAGG  100

seq1  GCAGATCACTTATGTTCCGCCCACCTTCCGTGTGGAGTATTTCCTAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCACTTATGTTCCGCCCACCTTCCGTGTGGAGTATTTCCTAGAGC  150

seq1  CCTTCTCCTTTAAGACAGGCACTGTTGAACTTTCCAGGCGATTACCGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTTTAAGACAGGCACTGTTGAACTTTCCAGGCGATTACCGAAT  200

seq1  GAGTCATACATTTTCCACAAGCCTCTGAACTCCTTACCTGTGAAATCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATACATTTTCCACAAGCCTCTGAACTCCTTACCTGTGAAATCAAC  250

seq1  CTTTCCATACAGGTCTTGAATCTGAGGAGCCAGGCCCAGTTTGAACAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATACAGGTCTTGAATCTGAGGAGCCAGGCCCAGTTTGAACAGGT  300

seq1  ACAAACTAGAAGACACCAACATGCAAAGAGTGAGGCCTCGTGCCACAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTAGAAGACACCAACATGCAAAGAGTGAGGCCTCGTGCCACAGCA  350

seq1  GCTGTAGCTCAGGTGGAGGGGTGAGACTGAGAAGAGAGGCCCCCCTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGCTCAGGTGGAGGGGTGAGACTGAGAAGAGAGGCCCCCCTCACC  400

seq1  GGGACTGTTACCCCAGCATACTTTCGTGTCACAGTGAGAGGTACAATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGTTACCCCAGCATACTTTCGTGTCACAGTGAGAGGTACAATAGG  450

seq1  ATGAAAGATTTCCCTTAGGCTGGAATTTCATGTCCCAGTTGTGGCCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGATTTCCCTTAGGCTGGAATTTCATGTCCCAGTTGTGGCCCAAA  500

seq1  GCTAATGTATGCCGAGACATAGATGTTAATATAACATGGTATTCACACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGTATGCCGAGACATAGATGTTAATATAACATGGTATTCACACCA  550

seq1  GTAAGTCCTTCACACTCGTAAGTTTTAGGTAATAAGACATTTTAAACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCCTTCACACTCGTAAGTTTTAGGTAATAAGACATTTTAAACAAG  600

seq1  CCTCATGAAAATGACTCAGACAGTGACTCTTGCTTCAGTGAGAATTC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGAAAATGACTCAGACAGTGACTCTTGCTTCAGTGAGAATTC  647

seq1: chr7_87773219_87774334
seq2: B6Ng01-046L17.g_66_1168

seq1  GAATTCCCACGATCCTACATCATTCTTATGTGCCCTGACGGACACCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACGATCCTACATCATTCTTATGTGCCCTGACGGACACCATGT  50

seq1  AACAGAGAGAACTAGAAGTCACTGCAGCCCTGTGGGCTGGATCTGTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAGAACTAGAAGTCACTGCAGCCCTGTGGGCTGGATCTGTCCAG  100

seq1  TGGGGAGAGCTGGGAGAAGTCAACACTCCCCAGAACCACTGTCCTCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAGCTGGGAGAAGTCAACACTCCCCAGAACCACTGTCCTCACCT  150

seq1  CTCAGCAGAGAGAGACCTAGAGGCCATGATGGCCAGGAAAGCTGGGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGAGAGAGACCTAGAGGCCATGATGGCCAGGAAAGCTGGGCTTC  200

seq1  CTCTCTACATCCCTGCTGTTCCTCACAGGAGTATTCTCCTGCATATGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTACATCCCTGCTGTTCCTCACAGGAGTATTCTCCTGCATATGTTA  250

seq1  GCATGGCCACTGAGTGGACGAGCCTGGGCTACATGAGTCGCAGCAGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCCACTGAGTGGACGAGCCTGGGCTACATGAGTCGCAGCAGTGGA  300

seq1  CTCTTGGGCAACTTACTCTGATATCTTAGTTTTCTCGTGGGAAAACTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGGCAACTTACTCTGATATCTTAGTTTTCTCGTGGGAAAACTGAG  350

seq1  GGTTAAAAAACAAACGACTCATTGAATTCTGAGGACTAAATGACATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAAAACAAACGACTCATTGAATTCTGAGGACTAAATGACATATAA  400

seq1  ATTGCCTAGCACAGTGTCTGGCATGGGTAGGTGCTCAGTAAACATGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTAGCACAGTGTCTGGCATGGGTAGGTGCTCAGTAAACATGAGTG  450

seq1  CCCTCCCCCACTTCCTGGTTTCTAAGCTTATGAAGCCAACTCTGCCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCACTTCCTGGTTTCTAAGCTTATGAAGCCAACTCTGCCATCA  500

seq1  CTGCCAGGAATCAGCTCTCTGCAGGGAGACTCGCCCCGCCCATCTGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGAATCAGCTCTCTGCAGGGAGACTCGCCCCGCCCATCTGCTCC  550

seq1  TTCCTCCGCCAGGCTTGTCCTGAGCTCAGTGAAGTGAGAGAAGCTTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCGCCAGGCTTGTCCTGAGCTCAGTGAAGTGAGAGAAGCTTCCTC  600

seq1  ACTTCTGCCTCTCCTTGTCCTAACCAGCAGGCTCAGGTTTGTCTGCCCCA  650
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTTCTGCCTCTCCTTGTCCTAACCAGCAGGCTC-GGTTTGTCTGCCCCA  649

seq1  ACCCTCAGTACTGTGCTGGCCCCACTCAGAAAGCCACCCTAGCCTGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGTACTGTGCTGGCCCCACTCAGAAAGCCACCCTAGCCTGGCCC  699

seq1  CTGTCCGACTCCCAACAGACAGTGCTGAGCTCAGCCGGTCGGGCTCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCGACTCCCAACAGACAGTGCTGAGCTCAGCCGGTCGGGCTCACAG  749

seq1  CTCCTTTCTTCATTACTCAGCCACACAGAGTGCGCTGGTACATCTCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTTCATTACTCAGCCACACAGAGTGCGCTGGTACATCTCTGTT  799

seq1  TAGGAGGCTTCCTAAACGCCCACTTTACATCTTACCTGTCATTTACTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGCTTCCTAAACGCCCACTTTACATCTTACCTGTCATTTACTGAG  849

seq1  TCTGAGACTAGACAGACAGACAGTCTTGTAAGATTTCCTCTTTCAGTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACTAGACAGACAGACAGTCTTGTAAGATTTCCTCTTTCAGTTCC  899

seq1  AAAAGCAGGTCATCAGGTCAACAAAACACAAACACATGGATCTGCCTGGG  950
       |||||| ||||||| |||||| |||||||||||||||||||||||||||
seq2  -AAAGCA-GTCATCA-GTCAAC-AAACACAAACACATGGATCTGCCTGGG  945

seq1  TTTGGCTAGACAGCCTACATCTCTCTAGTTGATTCAAAGTCAAGCTTAAT  1000
      ||||||||||||| |||||||| ||||| |||||||||||||||||  ||
seq2  TTTGGCTAGACAG-CTACATCTTTCTAG-TGATTCAAAGTCAAGCT--AT  991

seq1  ACTGCTGATTTCTGAAGAAAACGTCAAAGATGCCTTG-TCCACCAGAACT  1049
      ||||||||||||||||| ||||||| ||||||||||| ||||||||| ||
seq2  ACTGCTGATTTCTGAAG-AAACGTC-AAGATGCCTTGTTCCACCAGACCT  1039

seq1  GAATGCTTATGTTCTGTTCTAGTCAACGGAACTTTACCGACGCT-CTCAT  1098
      ||||||   |  || | ||  ||  ||||||| ||||||||||| |||||
seq2  GAATGC---TAGTCGGGTCAGGT--ACGGAAC-TTACCGACGCTCCTCAT  1083

seq1  AA--CCAACGACCGAGCTCT  1116
      ||  || |||||||||||||
seq2  AAATCCCACGACCGAGCTCT  1103