BAC Information

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BAC

Clone NameB6Ng01-046O14
Chromosome7 (Build37)
Map Location 18,593,006 - 18,719,870
singlet/doubletdoublet
Overlap geneCeacam13, LOC384560, Ceacam12
Upstream genePpp5c, Hif3a, Psg16, LOC100042844, LOC640145, Ceacam3, Psg29, LOC414361, LOC671132, LOC100042868, Psg-ps1, LOC666767, Psg30, Ppia-ps7_184.1, Ceacam14, EG381852, Ceacam11
Downstream geneIgfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831, EG574429, EG232930, Psg25, EG545925, Psg23, Psg21, EG434540, BC050099, LOC666863, Sycp1-ps1, Psg19, Psg17, Mill2, Pglyrp1, C530028I08Rik, Nova2, Nanos2, P42pop, Irf2bp1, Foxa3, Sympk, Rshl1, Dmwd, Dmpk, Six5, EG243866, Fbxo46
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046O14.bB6Ng01-046O14.g
ACCDH871929DH871930
length1,1521,038
definitionDH871929|Mus musculus domesticus DNA, BAC clone: B6Ng01-046O14, 5' end.DH871930|Mus musculus domesticus DNA, BAC clone: B6Ng01-046O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,718,695 - 18,719,870)(18,593,006 - 18,594,066)
sequence
gaattccagggaaattgttgcctgtagtcatatgccaatggcaggtttcc
aattgtcctctgctcaaggctgttgtacagaagtttcccacaagttccca
gcagagtctctgaatgtactctgtgaagtaaacaagttgtttggcagttt
cttattatgcaaggtataacatgtaggagttgtaacaaggtcacatgaag
aacttggtcaacagatttcaggacagcagtggtagtaacatgagtgattg
tgtcatctcgtttttcttgtcataaccgcccatgttcttgttgtagtctt
gggcaagctatggtttgtttatttaagtgacactaccatctttcttcttt
ctgttgacaactcctattttgataggatcatggaactttgaaataaaagt
tataggcatgttaacctgccataacatgcatggtattatgccctgataat
gactgtcaccacaaaggagtttcttgactgccttgggaatcttgggaaag
aactttctgttttgtaggagagttacaacaactaaatacagctgattcaa
agcatatttggctaaagtcactgaaactgtaaaaatcaagccatgatgaa
gatgtatgaactgttcttcatcttagctgatgtcaggggttgggcaacac
tatttccatttgcaccattcttgcactggtattggtgctggcccagtgta
gatttctacactgagtacatattcagtctcagcttcacaaagaagaaaag
acttgattccccaatttttgggcttttcttttatgtgcttttttattgcc
agatgattttccttagacatcagaccctcatccaggctctggtattgtct
tgactgatattaatagcaaaacttgggtagcagataattcagacagccac
atctggtatattctgtctgtttatcatgctcacatcctgctataaccata
tgcagaaagttcagatgacatgactatctagagtcatacatgatgttgtg
aacccagagtagatccagtgagtcagtcgtcactgactagtatcctgata
gctgtttaatacacagtatctaatgcatatctgagccaattaaaacttga
ttttaatcaaagaagcttcttgaagtctttgttaataagatagtttggct
tt
gaattcacgaattaaagcacccacatggacacctaggttgatattgacaa
cctatcttctcccaagccaaatctttccagcccagggttgcatcaggaat
ggtattgagggcccattcctgtttactgtacaatcaggctatgtccagtt
atggtaggaatataggtatctcagactcagtcttagtaaacacatgagaa
taaagtttgtctattctgtgggtgctgccagggtcatgtgtacggtatcc
aaacacattccctctaagctacactgtaacctctaattgggatccatatg
tggtttatcctaccacagagagagactggcttgctctttaacaaactatt
ctcctgccctctattgatttcagaagtggttttagaagtagctttgtcct
gtttgcatgacaggccctagtgccccattaataacatcttaaactcttaa
ttctggccaggagtctctgcctaccctcacccatctatatagttctaata
ggcttattgatagtgatctccaggatccttatgatcctttacctgcacat
cattattaatagcagggatctcatgcctacctcctccatagctctaccac
cagcatcaataggactatattgttacaaactccatcttctgctgagtgga
tttgcattaagctttgtggtagagtcttttggttttctgattagatgaaa
aaaaaatattttctagtatgtgtgggtgcaatcaaggctcagttttctcc
tgagacttctggtgtagccttcagttgtcctctctgttgtctctctgatt
cttccagattcaatctaatgaggggagttacagaatatctcagcagtcag
atgaacattataggggaagtagagaccatgagaagcagtagatttctttc
tgtccgtaagccatgtcttctgctctgcatttcctttaggacttcttgat
ctgggagatacccactgctttaacctgatcataggcagtcaatgacgatg
aaatgtacagtgtttggacaaagcatccagctctgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_18718695_18719870
seq2: B6Ng01-046O14.b_47_1198 (reverse)

seq1  AAAGCCAAACTACTATTATT-ACAAGAACTTCAAGGAAGCTTCTTTTGAT  49
      |||||||||||| | ||||| ||||  ||||||| |||||||| ||||||
seq2  AAAGCCAAACTA-TCTTATTAACAAAGACTTCAA-GAAGCTTC-TTTGAT  47

seq1  AAAAATCAAAGTTTTATTGTGCTCAGGATATGCA-TAGAGTACTTGTGTA  98
       |||||| |||||||| |  ||||| |||||||| |||| ||| ||||||
seq2  TAAAATC-AAGTTTTAATTGGCTCA-GATATGCATTAGA-TAC-TGTGTA  93

seq1  TAAAACCAAGCTATCAGGATTACTAGTTCAGTGACGGAACTGACTCCACT  148
      | ||||  ||||||||||| |||||| |||||||||  ||||||| ||||
seq2  TTAAAC--AGCTATCAGGA-TACTAG-TCAGTGACG--ACTGACT-CACT  136

seq1  GGATCTACTCTGGGGTTCCACAACATCATGTATGACTCTAGATAGGTTCA  198
      ||||||||||||||  | |||||||||||||||||||||||||||  |||
seq2  GGATCTACTCTGGG--TTCACAACATCATGTATGACTCTAGATAG--TCA  182

seq1  TGGTCATCTGAACTTTCTTGCATATGGTTTATAAGCAGGATGTGAGCATT  248
      | ||||||||||||||| ||||||||| |||| ||||||||||||||| |
seq2  T-GTCATCTGAACTTTC-TGCATATGG-TTAT-AGCAGGATGTGAGCA-T  227

seq1  GATAAAACAGACAGAATATACCAGATGTGGCTTGTTCTGAATTATCTGCT  298
      ||| ||||||||||||||||||||||||||||   |||||||||||||||
seq2  GAT-AAACAGACAGAATATACCAGATGTGGCT--GTCTGAATTATCTGCT  274

seq1  ACCCAAGTTTTGCTATTAATATCAGTCAAGACAATACCAGAGCCTGGATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGTTTTGCTATTAATATCAGTCAAGACAATACCAGAGCCTGGATG  324

seq1  AGGGTCTGATGTCTAAGGAAAATCATCTGGCAATAAAAAAGCACATAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGATGTCTAAGGAAAATCATCTGGCAATAAAAAAGCACATAAAA  374

seq1  GAAAAGCCCAAAAATTGGGGAATCAAGTCTTTTCTTCTTTGTGAAGCTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCCCAAAAATTGGGGAATCAAGTCTTTTCTTCTTTGTGAAGCTGA  424

seq1  GACTGAATATGTACTCAGTGTAGAAATCTACACTGGGCCAGCACCAATAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATATGTACTCAGTGTAGAAATCTACACTGGGCCAGCACCAATAC  474

seq1  CAGTGCAAGAATGGTGCAAATGGAAATAGTGTTGCCCAACCCCTGACATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCAAGAATGGTGCAAATGGAAATAGTGTTGCCCAACCCCTGACATC  524

seq1  AGCTAAGATGAAGAACAGTTCATACATCTTCATCATGGCTTGATTTTTAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGATGAAGAACAGTTCATACATCTTCATCATGGCTTGATTTTTAC  574

seq1  AGTTTCAGTGACTTTAGCCAAATATGCTTTGAATCAGCTGTATTTAGTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGTGACTTTAGCCAAATATGCTTTGAATCAGCTGTATTTAGTTG  624

seq1  TTGTAACTCTCCTACAAAACAGAAAGTTCTTTCCCAAGATTCCCAAGGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTCTCCTACAAAACAGAAAGTTCTTTCCCAAGATTCCCAAGGCA  674

seq1  GTCAAGAAACTCCTTTGTGGTGACAGTCATTATCAGGGCATAATACCATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAAACTCCTTTGTGGTGACAGTCATTATCAGGGCATAATACCATG  724

seq1  CATGTTATGGCAGGTTAACATGCCTATAACTTTTATTTCAAAGTTCCATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATGGCAGGTTAACATGCCTATAACTTTTATTTCAAAGTTCCATG  774

seq1  ATCCTATCAAAATAGGAGTTGTCAACAGAAAGAAGAAAGATGGTAGTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATCAAAATAGGAGTTGTCAACAGAAAGAAGAAAGATGGTAGTGTC  824

seq1  ACTTAAATAAACAAACCATAGCTTGCCCAAGACTACAACAAGAACATGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATAAACAAACCATAGCTTGCCCAAGACTACAACAAGAACATGGG  874

seq1  CGGTTATGACAAGAAAAACGAGATGACACAATCACTCATGTTACTACCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTATGACAAGAAAAACGAGATGACACAATCACTCATGTTACTACCAC  924

seq1  TGCTGTCCTGAAATCTGTTGACCAAGTTCTTCATGTGACCTTGTTACAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCCTGAAATCTGTTGACCAAGTTCTTCATGTGACCTTGTTACAAC  974

seq1  TCCTACATGTTATACCTTGCATAATAAGAAACTGCCAAACAACTTGTTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACATGTTATACCTTGCATAATAAGAAACTGCCAAACAACTTGTTTA  1024

seq1  CTTCACAGAGTACATTCAGAGACTCTGCTGGGAACTTGTGGGAAACTTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGAGTACATTCAGAGACTCTGCTGGGAACTTGTGGGAAACTTCT  1074

seq1  GTACAACAGCCTTGAGCAGAGGACAATTGGAAACCTGCCATTGGCATATG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAACAGCCTTGAGCAGAGGACAATTGGAAACCTGCCATTGGCATATG  1124

seq1  ACTACAGGCAACAATTTCCCTGGAATTC  1176
      ||||||||||||||||||||||||||||
seq2  ACTACAGGCAACAATTTCCCTGGAATTC  1152

seq1: chr7_18593006_18594066
seq2: B6Ng01-046O14.g_67_1104

seq1  GAATTCACGAATTAAAGCACCCACATGGACACCTAGGTTGATATTGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGAATTAAAGCACCCACATGGACACCTAGGTTGATATTGACAA  50

seq1  CCTATCTTCTCCCAAGCCAAATCTTTCCAGCCCAGGGTTGCATCAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTTCTCCCAAGCCAAATCTTTCCAGCCCAGGGTTGCATCAGGAAT  100

seq1  GGTATTGAGGGCCCATTCCTGTTTACTGTACAATCAGGCTATGTCCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGAGGGCCCATTCCTGTTTACTGTACAATCAGGCTATGTCCAGTT  150

seq1  ATGGTAGGAATATAGGTATCTCAGACTCAGTCTTAGTAAACACATGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGGAATATAGGTATCTCAGACTCAGTCTTAGTAAACACATGAGAA  200

seq1  TAAAGTTTGTCTATTCTGTGGGTGCTGCCAGGGTCATGTGTACGGTATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTGTCTATTCTGTGGGTGCTGCCAGGGTCATGTGTACGGTATCC  250

seq1  AAACACATTCCCTCTAAGCTACACTGTAACCTCTAATTGGGATCCATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATTCCCTCTAAGCTACACTGTAACCTCTAATTGGGATCCATATG  300

seq1  TGGTTTATCCTACCACAGAGAGAGACTGGCTTGCTCTTTAACAAACTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATCCTACCACAGAGAGAGACTGGCTTGCTCTTTAACAAACTATT  350

seq1  CTCCTGCCCTCTATTGATTTCAGAAGTGGTTTTAGAAGTAGCTTTGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCCTCTATTGATTTCAGAAGTGGTTTTAGAAGTAGCTTTGTCCT  400

seq1  GTTTGCATGACAGGCCCTAGTGCCCCATTAATAACATCTTAAACTCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCATGACAGGCCCTAGTGCCCCATTAATAACATCTTAAACTCTTAA  450

seq1  TTCTGGCCAGGAGTCTCTGCCTACCCTCACCCATCTATATAGTTCTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCCAGGAGTCTCTGCCTACCCTCACCCATCTATATAGTTCTAATA  500

seq1  GGCTTATTGATAGTGATCTCCAGGATCCTTATGATCCTTTACCTGCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTGATAGTGATCTCCAGGATCCTTATGATCCTTTACCTGCACAT  550

seq1  CATTATTAATAGCAGGGATCTCATGCCTACCTCCTCCATAGCTCTACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTAATAGCAGGGATCTCATGCCTACCTCCTCCATAGCTCTACCAC  600

seq1  CAGCATCAATAGGACTATATTGTTACAAACTCCATCTTCTGCTGAGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCAATAGGACTATATTGTTACAAACTCCATCTTCTGCTGAGTGGA  650

seq1  TTTGCATTAAGCTTTGTGGTAGAGTCTTTTGGTTTTCTGATTAGATGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTAAGCTTTGTGGTAGAGTCTTTTGGTTTTCTGATTAGATGAAA  700

seq1  AAAAAATATTTTCTAGTATGTGTGGGTGCAATCAAGGCTCAGTTTTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATTTTCTAGTATGTGTGGGTGCAATCAAGGCTCAGTTTTCTCC  750

seq1  TGAGACTTCTGGTGTAGCCTTCAGTTGTCCTCTCTGTTGTCTCTCTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTTCTGGTGTAGCCTTCAGTTGTCCTCTCTGTTGTCTCTCTGATT  800

seq1  CTTCCAGATTCAATCTAATGAGGGGAGTTACAGAATATCTCAGGCAGTCA  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTCCAGATTCAATCTAATGAGGGGAGTTACAGAATATCTCA-GCAGTCA  849

seq1  GATGAACATTATAGGGGAAGGTAGAGACCATGAGAAAGCAAGTAGATTTC  900
      ||||||||||||||||||| |||||||||||||| |||| ||||||||||
seq2  GATGAACATTATAGGGGAA-GTAGAGACCATGAG-AAGC-AGTAGATTTC  896

seq1  TTTCTGTCCGTAAGCCATGTCTTCCTGCCTCCTGCATTTCCTTTTAGGAC  950
      ||||||||||||||||||||||| ||||   |||||||||| ||||||||
seq2  TTTCTGTCCGTAAGCCATGTCTT-CTGC--TCTGCATTTCC-TTTAGGAC  942

seq1  TTCTTGATCTGGGAGGAATACCCACTGCTTTTAAACCTGATCATAGGCAG  1000
      |||||||||||||||  ||||||||||||||  |||||||||||||||||
seq2  TTCTTGATCTGGGAG--ATACCCACTGCTTT--AACCTGATCATAGGCAG  988

seq1  TCAAATGACAGATGAAAATGTACAGTTGTTTTGGGACAAAAAGCATCTCA  1050
      || |||||| |||| |||||||||| |||||  ||||  ||||||||   
seq2  TC-AATGAC-GATG-AAATGTACAG-TGTTT--GGAC--AAAGCATC---  1027

seq1  GAGCTCTGCTC  1061
       ||||||||||
seq2  CAGCTCTGCTC  1038