BAC Information

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BAC

Clone NameB6Ng01-047J23
Chromosome7 (Build37)
Map Location 127,516,459 - 127,670,128
singlet/doubletdoublet
Overlap geneAbca15, Abca16, LOC668429
Upstream geneGp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14
Downstream geneLOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047J23.bB6Ng01-047J23.g
ACCDH872435DH872436
length926940
definitionDH872435|Mus musculus domesticus DNA, BAC clone: B6Ng01-047J23, 5' end.DH872436|Mus musculus domesticus DNA, BAC clone: B6Ng01-047J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,669,190 - 127,670,128)(127,516,459 - 127,517,420)
sequence
gaattctttttcaattcttctgaattacaactgagaagggacctgaagag
cacacagagttaaagtgatatcgatttggaaaaaatactagtgctactaa
ggaaatttcaaaaattctacatactggcttgtaatttcaattctttaaaa
attccacagttgtaccttctgatcaataacatgattatttagcaagatca
ctaacttatggaaagaaaggctaaagtaagaatgtcccattagaatcttg
tgtagttcttgtaaatagaaaatatttccaagtactagtgtttataggaa
gcacatgaagagaatcagtaattgtagaatctaatgcctctcactatggc
tggatcctcccctatcaacaaggaggattgtatagtcaggaagaaattat
ggaaaccttgagacacaagtatgagaaaactctcaattagaactggtttc
atttaaatttacctggacaagtgaagcatgcattctgttgttacagagga
tgtgagtcaatatagtaaaaacaggaaatttaaaaataatgtaaatgaaa
tgaaactagggttttcttgaaataagttgcattgaaagtttgtatgaaaa
caaaaaacatatcatggcaaaggggacattctgccaaagaaaattaacac
agggagtggggaaatggcaatgcataaagagaattaaatgtatttgaaca
ctgctacagttaagagactgttacaagcagcacattacagagttggaaaa
cacagcctcaggttcagacttcttgcttttatgcacatggctctggggtc
agcccttaataccgtcgtacagtggtcattacatatacgccaccaggaca
gattaacatacaaaaatatataaatgcacatgtagtataaagtacaaagt
gagttttcaatagtgggaagactcat
gaattcaaatgaatatgttgggagtcattttgtttcgataaatctcctcc
caaataagccccagcaaatgaaaacacaacacagttaatatgattacatg
ttgtgtgcctagattggacagatctaccactacactaccatcttccacat
ctatgagaccccttagaactcatggtttctccaggccatgtgcttctgct
cagcttttctttttctcccattttctccttttctcccccaccttctactc
caccttcccttttatgtacccaaacatcagctctcctttattttaaaaat
taaggtgggaagcaggtttacaggaaatcacctgagtgctgactcattcc
tcctttgaaacccctcagaggagaacagatttaacatcaaatataattag
tcccagggctatccacaacagaggtgggttggtgcttgggaactaaatca
gatgtcactaaacaatgaataacctgcaggatgtggtggcacacatcttt
aatcccagcactcaggaggcagaggcaggtgtatttctgagttcgaggcc
agcctggtctacaaagtgagttccaggacatccagggctgcacagagaga
ccctgtctcaaaaaagaaaaacaaaacaaaacaaaaacaatgaataaccc
aaagtgcctttggagtcaggggttgccactcacattcttcaagcaaggga
tagtgggataaagttgaaatgacaagttttgtttattttttttaatatag
ggtcagtaacctggaagactcaaaacagatatcgaagctacccagtcgtc
tcggtagagcaagggaacagaatggggatgtgaaagcagcgggagagtag
ctttccatccagagtgagatcagacattgtgttacactgggtagaatttg
ctagaacagtgtttctcagtcagtaccatagtttgtcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127669190_127670128
seq2: B6Ng01-047J23.b_47_972 (reverse)

seq1  ATGAGTCTTTCCCACTAATTTGAAAAACTCACTTTGTACTTTAATACTTA  50
      ||||||| |||||||||  ||| ||||||||||||||||||| |||||  
seq2  ATGAGTC-TTCCCACTA--TTG-AAAACTCACTTTGTACTTT-ATACT--  43

seq1  ACAATGTGCATTTAATTATATTTTGTATTGTTTAATTCTGTCCTGTTGGC  100
      || |||||||||||  ||| ||||||| ||||  | ||||||||| ||||
seq2  AC-ATGTGCATTTATATAT-TTTTGTA-TGTT--AATCTGTCCTGGTGGC  88

seq1  GTATATGTAATGAACCACTGTACGACGGTATTAAGGGCTGACCCCAGAGC  150
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTATATGTAATG-ACCACTGTACGACGGTATTAAGGGCTGACCCCAGAGC  137

seq1  CATGTGCATAAAAGCAAGAAGTCTGAACCTGAGGCTGTGTTTTCCAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCATAAAAGCAAGAAGTCTGAACCTGAGGCTGTGTTTTCCAACTC  187

seq1  TGTAATGTGCTGCTTGTAACAGTCTCTTAACTGTAGCAGTGTTCAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTGCTGCTTGTAACAGTCTCTTAACTGTAGCAGTGTTCAAATAC  237

seq1  ATTTAATTCTCTTTATGCATTGCCATTTCCCCACTCCCTGTGTTAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTCTCTTTATGCATTGCCATTTCCCCACTCCCTGTGTTAATTTT  287

seq1  CTTTGGCAGAATGTCCCCTTTGCCATGATATGTTTTTTGTTTTCATACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCAGAATGTCCCCTTTGCCATGATATGTTTTTTGTTTTCATACAA  337

seq1  ACTTTCAATGCAACTTATTTCAAGAAAACCCTAGTTTCATTTCATTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAATGCAACTTATTTCAAGAAAACCCTAGTTTCATTTCATTTACA  387

seq1  TTATTTTTAAATTTCCTGTTTTTACTATATTGACTCACATCCTCTGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAAATTTCCTGTTTTTACTATATTGACTCACATCCTCTGTAAC  437

seq1  AACAGAATGCATGCTTCACTTGTCCAGGTAAATTTAAATGAAACCAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATGCATGCTTCACTTGTCCAGGTAAATTTAAATGAAACCAGTTC  487

seq1  TAATTGAGAGTTTTCTCATACTTGTGTCTCAAGGTTTCCATAATTTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGAGTTTTCTCATACTTGTGTCTCAAGGTTTCCATAATTTCTTC  537

seq1  CTGACTATACAATCCTCCTTGTTGATAGGGGAGGATCCAGCCATAGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTATACAATCCTCCTTGTTGATAGGGGAGGATCCAGCCATAGTGAG  587

seq1  AGGCATTAGATTCTACAATTACTGATTCTCTTCATGTGCTTCCTATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTAGATTCTACAATTACTGATTCTCTTCATGTGCTTCCTATAAAC  637

seq1  ACTAGTACTTGGAAATATTTTCTATTTACAAGAACTACACAAGATTCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTACTTGGAAATATTTTCTATTTACAAGAACTACACAAGATTCTAA  687

seq1  TGGGACATTCTTACTTTAGCCTTTCTTTCCATAAGTTAGTGATCTTGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATTCTTACTTTAGCCTTTCTTTCCATAAGTTAGTGATCTTGCTA  737

seq1  AATAATCATGTTATTGATCAGAAGGTACAACTGTGGAATTTTTAAAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCATGTTATTGATCAGAAGGTACAACTGTGGAATTTTTAAAGAAT  787

seq1  TGAAATTACAAGCCAGTATGTAGAATTTTTGAAATTTCCTTAGTAGCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTACAAGCCAGTATGTAGAATTTTTGAAATTTCCTTAGTAGCACT  837

seq1  AGTATTTTTTCCAAATCGATATCACTTTAACTCTGTGTGCTCTTCAGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTTCCAAATCGATATCACTTTAACTCTGTGTGCTCTTCAGGTC  887

seq1  CCTTCTCAGTTGTAATTCAGAAGAATTGAAAAAGAATTC  939
      |||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCAGTTGTAATTCAGAAGAATTGAAAAAGAATTC  926

seq1: chr7_127516459_127517420
seq2: B6Ng01-047J23.g_67_1006

seq1  GAATTCAAATGAATATGTTGGGAGTCATTTTGTTTCGATAAATCTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGAATATGTTGGGAGTCATTTTGTTTCGATAAATCTCCTCC  50

seq1  CAAATAAGCCCCAGCAAATGAAAACACAACACAGTTAATATGATTACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGCCCCAGCAAATGAAAACACAACACAGTTAATATGATTACATG  100

seq1  TTGTGTGCCTAGATTGGACAGATCTACCACTACACTACCATCTTCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCCTAGATTGGACAGATCTACCACTACACTACCATCTTCCACAT  150

seq1  CTATGAGACCCCTTAGAACTCATGGTTTCTCCAGGCCATGTGCTTCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGACCCCTTAGAACTCATGGTTTCTCCAGGCCATGTGCTTCTGCT  200

seq1  CAGCTTTTCTTTTTCTCCCATTTTCTCCTTTTCTCCCCCACCTTCTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTCTTTTTCTCCCATTTTCTCCTTTTCTCCCCCACCTTCTACTC  250

seq1  CACCTTCCCTTTTATGTACCCAAACATCAGCTCTCCTTTATTTTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCCTTTTATGTACCCAAACATCAGCTCTCCTTTATTTTAAAAAT  300

seq1  TAAGGTGGGAAGCAGGTTTACAGGAAATCACCTGAGTGCTGACTCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGGAAGCAGGTTTACAGGAAATCACCTGAGTGCTGACTCATTCC  350

seq1  TCCTTTGAAACCCCTCAGAGGAGAACAGATTTAACATCAAATATAATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAAACCCCTCAGAGGAGAACAGATTTAACATCAAATATAATTAG  400

seq1  TCCCAGGGCTATCCACAACAGAGGTGGGTTGGTGCTTGGGAACTAAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGCTATCCACAACAGAGGTGGGTTGGTGCTTGGGAACTAAATCA  450

seq1  GATGTCACTAAACAATGAATAACCTGCAGGATGTGGTGGCACACATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCACTAAACAATGAATAACCTGCAGGATGTGGTGGCACACATCTTT  500

seq1  AATCCCAGCACTCAGGAGGCAGAGGCAGGTGTATTTCTGAGTTCGAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCACTCAGGAGGCAGAGGCAGGTGTATTTCTGAGTTCGAGGCC  550

seq1  AGCCTGGTCTACAAAGTGAGTTCCAGGACATCCAGGGCTGCACAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAAAGTGAGTTCCAGGACATCCAGGGCTGCACAGAGAGA  600

seq1  CCCTGTCTCAAAAAAGAAAAACAAAACAAAACAAAAACAATGAATAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAAGAAAAACAAAACAAAACAAAAACAATGAATAACCC  650

seq1  AAAGTGCCTTTGGAGTCAGGGGTTGCCACTCACATTCTTCAAGCAAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCCTTTGGAGTCAGGGGTTGCCACTCACATTCTTCAAGCAAGGGA  700

seq1  TAGTGGGATAAAGTTGAAATGACAAGTTTTGTTTA-TTTTTTTAATATAG  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGTGGGATAAAGTTGAAATGACAAGTTTTGTTTATTTTTTTTAATATAG  750

seq1  GGTCAGTAACCTGGAAGACTCAAAAACAGATATCGAAGCTACCCAGTCGC  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  GGTCAGTAACCTGGAAGACTC-AAAACAGATATCGAAGCTACCCAGTCG-  798

seq1  CCTCGGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGAAAGCAGCGGG  849
       ||||||||  ||| |||||||| |||||||||||| |||||||||||||
seq2  TCTCGGTAG--AGC-AAGGGAAC-AGAATGGGGATG-TGAAAGCAGCGGG  843

seq1  AGAGTAGGCTTTCCCACCCAGAGTGAAGATCAGAACATTGTGTTTAACAC  899
      |||||| ||||| ||| |||||||| ||||||| ||||||||||  ||||
seq2  AGAGTA-GCTTT-CCATCCAGAGTG-AGATCAG-ACATTGTGTT--ACAC  887

seq1  TGGGGTAAGAAATTTTGCTAAGAAACAGGTGTCTCTCAGTCAGTACGCAA  949
      ||||   ||||  |||||||   |||| |||| ||||||||||||  | |
seq2  TGGG--TAGAA--TTTGCTA--GAACA-GTGTTTCTCAGTCAGTA--CCA  928

seq1  TAGTTTTGTCTTG  962
      ||| |||||||||
seq2  TAG-TTTGTCTTG  940