BAC Information

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BAC

Clone NameB6Ng01-047O19
Chromosome7 (Build37)
Map Location 8,003,463 - 8,004,529
singlet/doubletsinglet
Overlap geneLOC100042662
Upstream geneLOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170
Downstream geneLOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047O19.bB6Ng01-047O19.g
ACCDH872649DH872650
length1,1071,054
definitionDH872649|Mus musculus domesticus DNA, BAC clone: B6Ng01-047O19, 5' end.DH872650|Mus musculus domesticus DNA, BAC clone: B6Ng01-047O19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttacctctgagccccattttttaatggggttatttgatt
ttctggagtctaccttcttgattctttatatatattggatattagtcccc
tatcctatttaggataggtaaagatccttttccgacctgttggtggcctt
tttgtctcattgacagtgtctttttccccgcagaaatttgcagtttcctg
aggtcccatttgtcaattctcaaccttacagaactagccattgcttttgt
attcaagaatttttcccctgtgccccatatctttgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtcgagctcgttgat
ccacttagatttgaccttagtccaaggagataggaatcgatcaattcgca
ttcttctacatgataaccaccagtggtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggtttttgctcccttgtcaaagatcaagtg
accatagatgtgtgggttcatttctgggtcttcaattctattccaatggt
ctacttgtctgttgatataccagtacaatgcagtttttatcacaattgct
ctctagtacagctttaggtcaggcatggtgattccaccacaggttctttt
atccttgagaagggtttttgctatcctaggttttttgttattccagatga
tttctggcaattgccctttctaattcattgaagaattgatttggaatttt
gatggggattgcactgaatctgtagtttgcttttggcaacatagccattt
ttacaatattgatcctggcaatctatgagcattggagacctttccttctc
tgagatcttctttaattactttcatcagagacttaaagttcttatcatac
agatctttcaattccttatttagggttcatggcgaagggtatattacatt
atttgtgactattgaggaggtgttgtttccctatttcttttctcagcctg
tattcttttgtatagagcaaagcatgactggtgagttatttaattacagc
ttacttccctgagctggttatcaggttaagggttctctctggtggaaatt
tagggca
gaattcctggacgatgactcacacgtggagataagaagctgtccaggtac
atccagaaatttaaagatacctcccaattgggtcctgtaagcagaaacga
acacatactctcttcattacagaaatagtttgggatagggctttgttttt
tttttttatgtaataaatatggtgtaggtattacagttttcccatcacaa
cggcccaaagtgtatcttatgatcaaagacatatttggtaaaagatcagg
attcctgttgatttcatccattgaaaagaccaatgccaaagcatatttgt
ggtttttagttgtttttctgtaaaagagtacagtgtttattatggacaga
tgattatacatgaatattagtactcaatggaagttctatgctatactgga
aatttctgcatctgacatctaaagactggaacaaatgactttgttgtgag
attggattgacagaagaacctagaatatagaaagcactttaaaagttcat
gatgttgttggtcccataaataagagatggtattgaccttatccacagag
ataatttccatttttgtttttgagcacttgatcagaaggtaaagagaaaa
ccacagatattgacaaaacagtaattttgatcatgtcttcattttgaaat
tattgagcaatataaaaaacttgttatttgagccactgagttcacatttt
cttgtgaaattaactgaatttgttaaggaagtaaaaacatgatttatcaa
tgcctaatggtctttctccagcaacacttgattcctgtacttacaatcac
ttataattagtggtcaatattcttgacatgtcccctcatatctatactca
tcttgttatttttcaatcttaatggaaagaaaatatttagaaagatttat
ttttaaataaatcaaaatcaaatatgatttggtatttatacatgtcatga
tcaggtgtatatatttgagcaggattattaggtataagatgcaatacatc
taatgctttataagaaccatggctgagactacctctagtccaattgcaca
ggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8003463_8004529
seq2: B6Ng01-047O19.g_69_1122

seq1  GAATTCCTGGACGATGACTCACACGTGGAGATAAGAAGCTGTCCAGGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGACGATGACTCACACGTGGAGATAAGAAGCTGTCCAGGTAC  50

seq1  ATCCAGAAATTTAAAGATACCTCCCAATTGGGTCCTGTAAGCAGAAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAAATTTAAAGATACCTCCCAATTGGGTCCTGTAAGCAGAAACGA  100

seq1  ACACATACTCTCTTCATTACAGAAATAGTTTGGGATAGGGCTTTGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACTCTCTTCATTACAGAAATAGTTTGGGATAGGGCTTTGTTTTT  150

seq1  TTTTTTTATGTAATAAATATGGTGTAGGTATTACAGTTTTCCCATCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATGTAATAAATATGGTGTAGGTATTACAGTTTTCCCATCACAA  200

seq1  CGGCCCAAAGTGTATCTTATGATCAAAGACATATTTGGTAAAAGATCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCAAAGTGTATCTTATGATCAAAGACATATTTGGTAAAAGATCAGG  250

seq1  ATTCCTGTTGATTTCATCCATTGAAAAGACCAATGCCAAAGCATATTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTTGATTTCATCCATTGAAAAGACCAATGCCAAAGCATATTTGT  300

seq1  GGTTTTTAGTTGTTTTTCTGTAAAAGAGTACAGTGTTTATTATGGACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTAGTTGTTTTTCTGTAAAAGAGTACAGTGTTTATTATGGACAGA  350

seq1  TGATTATACATGAATATTAGTACTCAATGGAAGTTCTATGCTATACTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATACATGAATATTAGTACTCAATGGAAGTTCTATGCTATACTGGA  400

seq1  AATTTCTGCATCTGACATCTAAAGACTGGAACAAATGACTTTGTTGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGCATCTGACATCTAAAGACTGGAACAAATGACTTTGTTGTGAG  450

seq1  ATTGGATTGACAGAAGAACCTAGAATATAGAAAGCACTTTAAAAGTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTGACAGAAGAACCTAGAATATAGAAAGCACTTTAAAAGTTCAT  500

seq1  GATGTTGTTGGTCCCATAAATAAGAGATGGTATTGACCTTATCCACAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGTTGGTCCCATAAATAAGAGATGGTATTGACCTTATCCACAGAG  550

seq1  ATAATTTCCATTTTTGTTTTTGAGCACTTGATCAGAAGGTAAAGAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCCATTTTTGTTTTTGAGCACTTGATCAGAAGGTAAAGAGAAAA  600

seq1  CCACAGATATTGACAAAACAGTAATTTTGATCATGTCTTCATTTTGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATATTGACAAAACAGTAATTTTGATCATGTCTTCATTTTGAAAT  650

seq1  TATTGAGCAATATAAAAAACTTGTTATTTGAGCCACTGAGTTCACATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGCAATATAAAAAACTTGTTATTTGAGCCACTGAGTTCACATTTT  700

seq1  CTTGTGAAATTAACTGAATTTGTTAAGGAAGTAAAAACATGATTTATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAAATTAACTGAATTTGTTAAGGAAGTAAAAACATGATTTATCAA  750

seq1  TGCCTAATGGTCTTTCTCCAGCAACACTTGATTCCTGTACTTACAATCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAATGGTCTTTCTCCAGCAACACTTGATTCCTGTACTTACAATCAC  800

seq1  TTATAATTAGTGGTCAATATTCTTGACATGTCCCCTCATATCTATACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTAGTGGTCAATATTCTTGACATGTCCCCTCATATCTATACTCA  850

seq1  TCTTGTTATTTTTCAATCTTAATGGAAAGAAAATATTTAGAAAGATTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTATTTTTCAATCTTAATGGAAAGAAAATATTTAGAAAGATTTAT  900

seq1  TTTTAAATAAAATCAAAAATCAAATATGAATTTGGTAATTTATACATGTC  950
      |||||||| ||||| ||||||||||||| ||||||| |||||||||||||
seq2  TTTTAAAT-AAATC-AAAATCAAATATG-ATTTGGT-ATTTATACATGTC  946

seq1  AATGATTAAGGTTGTATATATTTGAGCAAGGATTATTTAGGTTATAAGAT  1000
       ||||| |  | ||||||||||||||| ||||||| ||||| ||||||| 
seq2  -ATGATCA--GGTGTATATATTTGAGC-AGGATTA-TTAGG-TATAAGA-  989

seq1  TGCAATACATCTAAATGCTTTATAAGATACCAT-GCTGTAGACTACCCTC  1049
      |||||||||||| |||||||||||||| ||||| |||| ||||||||   
seq2  TGCAATACATCT-AATGCTTTATAAGA-ACCATGGCTG-AGACTACCTCT  1036

seq1  AGTTCAAATGCACAGGTA  1067
      ||| ||| ||||||||||
seq2  AGTCCAATTGCACAGGTA  1054