BAC Information

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BAC

Clone NameB6Ng01-048F08
Chromosome7 (Build37)
Map Location 136,991,515 - 137,148,707
singlet/doubletdoublet
Overlap geneLOC100043150
Upstream geneLOC210714, LOC100043144, Ppapdc1a, Brwd2
Downstream geneFgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048F08.bB6Ng01-048F08.g
ACCDH872923DH872924
length1,013146
definitionDH872923|Mus musculus domesticus DNA, BAC clone: B6Ng01-048F08, 5' end.DH872924|Mus musculus domesticus DNA, BAC clone: B6Ng01-048F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,991,515 - 136,992,529)(137,148,562 - 137,148,707)
sequence
gaattcaaaataactggcagtacaaaacaagcaaattgatttaaaaatga
ttaaattcttctccaaaggagaaatacaagtagttaataaaaaatatgag
aaatgtacagtatcattagccaccaggaaaatgcatctcaagctacaaag
agatgctgtcttacctcacttaggatagctattatccaaagaatcaaagc
aagagctggaaagatgacttggtggataagtgtgcctgttccaaatacat
gaggacctgagttcagtttcctagtggttatgtaaagtaattccagcatt
actatgcaaccccattattgaggggtagaaaagaggaccgcaaggtcttg
ctagccatccagtctagcaaaaacagcatgtggttcagtgagagaccatc
tcttaaggcaataacatgaacactgatagaggaaggaaactgttgccctg
ctctcccctcttcatgtatatcctacaccccccacaatacacacacacac
acaccacaccacatacacatacacatacgtgtacacatttccctggttgc
taacaatactgcttttttttttatatttttattaacgacttgtatttctc
ctttagagaagaattcaatcattttaaaatcaaattgcttgtttcatatt
gtcagttcttttgagttttttttcctagggaaatgagcatgcatgtctct
tcgccccagataggaaccgcaggcaggtgcacatgtgcaatggtggcaag
gttgtaagtaaaaagaagcatattacattggttagtgaaatacatcagga
cagccactgttggagacaccccaaaggactaaacctggaaaagatcgttg
ggtcctgctgtatccttcctggggttattactgaaaggaaatggcattta
ttcttcaacagaacccctggtgtgaagtggtttttgcgcactgttcacca
aaaacagcgtagtaaggatgccttaggtgatcactgctctacctagacat
tatctgtcactta
aaacccctttactcttatctgccatcttactcagggatttgtagtcagca
tgacagggaaacatgctgagcagggcagcactctctgtgtgagctgttgc
tcacaccgcatgccctgcaggggttctgggaaaggtgtgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136991515_136992529
seq2: B6Ng01-048F08.b_46_1058

seq1  GAATTCAAAATAACTGGCAGTACAAAACAAGCAAATTGATTTAAAAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATAACTGGCAGTACAAAACAAGCAAATTGATTTAAAAATGA  50

seq1  TTAAATTCTTCTCCAAAGGAGAAATACAAGTAGTTAATAAAAAATATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCTTCTCCAAAGGAGAAATACAAGTAGTTAATAAAAAATATGAG  100

seq1  AAATGTACAGTATCATTAGCCACCAGGAAAATGCATCTCAAGCTACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACAGTATCATTAGCCACCAGGAAAATGCATCTCAAGCTACAAAG  150

seq1  AGATGCTGTCTTACCTCACTTAGGATAGCTATTATCCAAAGAATCAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGTCTTACCTCACTTAGGATAGCTATTATCCAAAGAATCAAAGC  200

seq1  AAGAGCTGGAAAGATGACTTGGTGGATAAGTGTGCCTGTTCCAAATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTGGAAAGATGACTTGGTGGATAAGTGTGCCTGTTCCAAATACAT  250

seq1  GAGGACCTGAGTTCAGTTTCCTAGTGGTTATGTAAAGTAATTCCAGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCTGAGTTCAGTTTCCTAGTGGTTATGTAAAGTAATTCCAGCATT  300

seq1  ACTATGCAACCCCATTATTGAGGGGTAGAAAAGAGGACCGCAAGGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCAACCCCATTATTGAGGGGTAGAAAAGAGGACCGCAAGGTCTTG  350

seq1  CTAGCCATCCAGTCTAGCAAAAACAGCATGTGGTTCAGTGAGAGACCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCATCCAGTCTAGCAAAAACAGCATGTGGTTCAGTGAGAGACCATC  400

seq1  TCTTAAGGCAATAACATGAACACTGATAGAGGAAGGAAACTGTTGCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGGCAATAACATGAACACTGATAGAGGAAGGAAACTGTTGCCCTG  450

seq1  CTCTCCCCTCTTCATGTATATCCTACACCCCCCACAATACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCTCTTCATGTATATCCTACACCCCCCACAATACACACACACAC  500

seq1  ACACCACACCACATACACATACACATACGTGTACACATTTCCCTGGTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACACCACATACACATACACATACGTGTACACATTTCCCTGGTTGC  550

seq1  TAACAATACTGCTTTTTTTTTCATATTTTTATTAACGACTTGTATTTCTC  600
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAACAATACTGCTTTTTTTTTTATATTTTTATTAACGACTTGTATTTCTC  600

seq1  CTTTAGAGAAGAATTCAATCATTTTAAAATCAAATTGCTTGTTTCATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGAAGAATTCAATCATTTTAAAATCAAATTGCTTGTTTCATATT  650

seq1  GTCAGTTCTTTTGAGTTCTTTTTCCTAGGGAAATGAGCATGCATGTCTCT  700
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTCAGTTCTTTTGAGTTTTTTTTCCTAGGGAAATGAGCATGCATGTCTCT  700

seq1  TCGCCCCAGATAGGAACCGCAGGCAGGTGCACATGTGCAATGGTGGCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCCAGATAGGAACCGCAGGCAGGTGCACATGTGCAATGGTGGCAAG  750

seq1  GTTGT-AGT-AAAAGAAGCATA-TACATT-GTTAGTGAAAATACATCAGG  796
      ||||| ||| |||||||||||| |||||| ||||||| ||||||||||||
seq2  GTTGTAAGTAAAAAGAAGCATATTACATTGGTTAGTG-AAATACATCAGG  799

seq1  ACAGCCACTG-TGGAGACACCCAAAAAGGACTAAAACT-GAAAAGATCGT  844
      |||||||||| |||||||||||  ||||||||||| || |||||||||||
seq2  ACAGCCACTGTTGGAGACACCC-CAAAGGACTAAACCTGGAAAAGATCGT  848

seq1  TGGTTCCTGCTGTATCCTTCCTGGGGTTTATACTGAAAGGAAAT-GCAAT  893
      ||| ||||||||||||||||||||||||  |||||||||||||| ||| |
seq2  TGGGTCCTGCTGTATCCTTCCTGGGGTTATTACTGAAAGGAAATGGCATT  898

seq1  TATCATACAACAAGAACCCCT-GTGTGCAGGTGTTTATGCAGCACTGTTC  942
      |||  | |||| ||||||||| ||||| ||  |||| ||| |||||||||
seq2  TATTCTTCAAC-AGAACCCCTGGTGTGAAGTGGTTTTTGC-GCACTGTTC  946

seq1  ACCAGAAACCAGCGTAGGTAAGGAATGGCCTTAGGGTGATCACTGCTCTA  992
      |||| ||| ||||||| |||||||   |||||| ||||||||||||||||
seq2  ACCA-AAAACAGCGTA-GTAAGGA--TGCCTTA-GGTGATCACTGCTCTA  991

seq1  CCTAGGACATTATCTGTCACTTA  1015
      |||| ||||||||||||||||||
seq2  CCTA-GACATTATCTGTCACTTA  1013

seq1: chr7_137148562_137148707
seq2: B6Ng01-048F08.g_72_217 (reverse)

seq1  CCCCCCCCACACCTTTCCCAGAACCCCTGCAGGGCATGCGGTGTGAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCACACCTTTCCCAGAACCCCTGCAGGGCATGCGGTGTGAGCAA  50

seq1  CAGCTCACACAGAGAGTGCTGCCCTGCTCAGCATGTTTCCCTGTCATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACACAGAGAGTGCTGCCCTGCTCAGCATGTTTCCCTGTCATGCT  100

seq1  GACTACAAATCCCTGAGTAAGATGGCAGATAAGAGTAAAGGGGTTT  146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAAATCCCTGAGTAAGATGGCAGATAAGAGTAAAGGGGTTT  146