BAC Information

Click to search

BAC

Clone NameB6Ng01-048I12
Chromosome7 (Build37)
Map Location 145,263,734 - 145,386,669
singlet/doubletdoublet
Overlap genenone
Upstream geneMgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2, LOC435235
Downstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048I12.bB6Ng01-048I12.g
ACCDH873061DH873062
length1,090978
definitionDH873061|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I12, 5' end.DH873062|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,263,734 - 145,264,834)(145,385,681 - 145,386,669)
sequence
gaattccatctctgcccttcaaatgcggtggtgatgggaagctggtgctc
aaaggacccagcctgcaggcacatctgaggcccactctggcctgtggcaa
ttcgtgaaagagagtgttccctgtgcattccaatgaggctccaagctctg
cgccttttatttcaggacacaggtgccccaggggcttcttgtgaagtcca
ccaatttgcctttctaatcagacccttttgggtcagcctgcacctccatc
aatcagacacagagcccagggatttccccttggttcacctgggtgggcag
ggcacccactgcagttcgggaaatgaatttttcagaaagtgtgaccctaa
gacataaggccagcttcctcatacctccaccttaactcccctctatgagc
cgtggttttcttttgcctgtttgaaggaagaaaagaaaggtattttaaag
gcgattttatagtggatttcttgtatttgcttttgtttatcggagtttct
aagtcttcatattatgacatccacattttcattaatatcatttctcttag
agttttactgctgtaaacaaacaccatgatcagcgtatctcttattagta
caacattaattgggactggcttacaagctcagaggttcagtccattatca
tcaaggctggagcatggcagcatctaggcaggcatggtgcaagaggacct
gagagctctacatcttcatctgaagaccactaggagaagaagactggctt
ccaggcagctaggatgagggtcttaaagcccatgccctcagagacacact
tcctccaacaaggtcacacctaatctaacaaggccacatctctaaataat
gccactttctgggccaagcatagtcaaaccaccacagcatcatttagtgg
tatttaatgaaatcacactgtcatctgacatttaccagcaaagtcgtggc
cctccatgagaaacctgcagcctacccaaacccatcacatacatttagtc
cacctagtactgtcgctagaatcttgctttgcccccctaactccctctct
caatgctgtaatagaaccttgcttgtgcaacttctgtgct
gaattccatatcttccattgttttgctgaattatgttccaacaatacact
gttttaatcagaggctttatcatatttttaatattttaccagatacgatt
aatatctagtaagtctctcttcatcgttccatctttacattttaaagcta
ttttccgtttttaatataaaatttagaaaatacctatttgatttcagaaa
acaacttattagcatttttgttgatactgcatgaaacttacacgttaacc
taatgtatagttttaaataaaacacttcaggagttggggatctgactcta
ttctggtgaacaccacatttttaaggggtatttgctgggtacagcacttg
cctagtgtgtgtgaggccctgagattaatctagaccctgaattcatcccc
atcactgtggaaacaaaacaaaataagcaatccgaacagaagtacaggtt
ttcctcaagtactttaattttcttgtctatatttttcttctgaattgcca
tttagatggtgtcttcctatctgccatgtcaggctttgcttgtaattgag
cacatagaaagacggtccattatcctcttccatcaagtactaagatcaac
cagaccagaccctgcttagctttggatacattcagggcaggatggctgtg
gacacacattatcattctcatcttacacctggttctcgtcctggttccct
tgttttgctcttaaaaacttactcatggcggggttgggggtgtgtgtgtg
actaaaatttccttcacaagctcccacatttgaagactgaagacttagag
atctctagctggtgatgctgttggggggaaggctgtggaactttcagagg
gagagcctgctatgagaagtacgcattgcaggcagactttaccggtttat
aaggctacccacttcctgtctctctgctcatgcttgcatttgaagattgg
actctcaggtttagtctcatgtctgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145263734_145264834
seq2: B6Ng01-048I12.b_45_1134

seq1  GAATTCCATCTCTGCCCTTCAAATGCGGTGGTGATGGGAAGCTGGTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTCTGCCCTTCAAATGCGGTGGTGATGGGAAGCTGGTGCTC  50

seq1  AAAGGACCCAGCCTGCAGGCACATCTGAGGCCCACTCTGGCCTGTGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCCAGCCTGCAGGCACATCTGAGGCCCACTCTGGCCTGTGGCAA  100

seq1  TTCGTGAAAGAGAGTGTTCCCTGTGCATTCCAATGAGGCTCCAAGCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGAAAGAGAGTGTTCCCTGTGCATTCCAATGAGGCTCCAAGCTCTG  150

seq1  CGCCTTTTATTTCAGGACACAGGTGCCCCAGGGGCTTCTTGTGAAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTTATTTCAGGACACAGGTGCCCCAGGGGCTTCTTGTGAAGTCCA  200

seq1  CCAATTTGCCTTTCTAATCAGACCCTTTTGGGTCAGCCTGCACCTCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTGCCTTTCTAATCAGACCCTTTTGGGTCAGCCTGCACCTCCATC  250

seq1  AATCAGACACAGAGCCCAGGGATTTCCCCTTGGTTCACCTGGGTGGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGACACAGAGCCCAGGGATTTCCCCTTGGTTCACCTGGGTGGGCAG  300

seq1  GGCACCCACTGCAGTTCGGGAAATGAATTTTTCAGAAAGTGTGACCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCACTGCAGTTCGGGAAATGAATTTTTCAGAAAGTGTGACCCTAA  350

seq1  GACATAAGGCCAGCTTCCTCATACCTCCACCTTAACTCCCCTCTATGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAGGCCAGCTTCCTCATACCTCCACCTTAACTCCCCTCTATGAGC  400

seq1  CGTGGTTTTCTTTTGCCTGTTTGAAGGAAGAAAAGAAAGGTATTTTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTTTTCTTTTGCCTGTTTGAAGGAAGAAAAGAAAGGTATTTTAAAG  450

seq1  GCGATTTTATAGTGGATTTCTTGTATTTGCTTTTGTTTATCGGAGTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATTTTATAGTGGATTTCTTGTATTTGCTTTTGTTTATCGGAGTTTCT  500

seq1  AAGTCTTCATATTATGACATCCACATTTTCATTAATATCATTTCTCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTCATATTATGACATCCACATTTTCATTAATATCATTTCTCTTAG  550

seq1  AGTTTTACTGCTGTAAACAAACACCATGATCAGCGTATCTCTTATTAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTGCTGTAAACAAACACCATGATCAGCGTATCTCTTATTAGTA  600

seq1  CAACATTAATTGGGACTGGCTTACAAGCTCAGAGGTTCAGTCCATTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTAATTGGGACTGGCTTACAAGCTCAGAGGTTCAGTCCATTATCA  650

seq1  TCAAGGCTGGAGCATGGCAGCATCTAGGCAGGCATGGTGCAAGAGGACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCTGGAGCATGGCAGCATCTAGGCAGGCATGGTGCAAGAGGACCT  700

seq1  GAGAGCTCTACATCTTCATCTGAAGACCACTAGGAGAAGAAGACTGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTCTACATCTTCATCTGAAGACCACTAGGAGAAGAAGACTGGCTT  750

seq1  CCAGGCAGCTAGGATGAGGGTCTTAAAGCCCATGCCCTCAGAGACACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAGCTAGGATGAGGGTCTTAAAGCCCATGCCCTCAGAGACACACT  800

seq1  TCCTCCAACAAGGTCACACCTAATCTAACAAGGCCACATCTCTAAATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAACAAGGTCACACCTAATCTAACAAGGCCACATCTCTAAATAAT  850

seq1  GCCACTTTCTGGGCCAAGCATAGTCAAACCACCACAGCATCATTTAGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTTCTGGGCCAAGCATAGTCAAACCACCACAGCATCATTTAGTGG  900

seq1  TATTTAATGAAATCACACTGTCATCTGACATTTTACCAGCAAAGTCGTGG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATTTAATGAAATCACACTGTCATCTGACA-TTTACCAGCAAAGTCGTGG  949

seq1  CCCTCCATGAGAACACCTGCAGCCTACCCCAAACCCATCACATACATTTA  1000
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  CCCTCCATGAGAA-ACCTGCAGCCTA-CCCAAACCCATCACATACATTTA  997

seq1  GTCCACCTAGTACCTGTCGCTAGAATCTTGCTTTCTGCTCCCCTAACT-C  1049
      |||||||||||| ||||||||||||||||||||  ||| ||||||||| |
seq2  GTCCACCTAGTA-CTGTCGCTAGAATCTTGCTT--TGCCCCCCTAACTCC  1044

seq1  CTCTCTCAAATGGCCTGTAAATAGAACCCTTGCTTGTGCAACCTTCTGTG  1099
      ||||||| ||||  |||| ||||||| |||||||||||||| ||||||||
seq2  CTCTCTC-AATG--CTGT-AATAGAA-CCTTGCTTGTGCAA-CTTCTGTG  1088

seq1  CT  1101
      ||
seq2  CT  1090

seq1: chr7_145385681_145386669
seq2: B6Ng01-048I12.g_67_1044 (reverse)

seq1  CAGCAGGGACATGGGGACTGAACCTTGAGAGTCCACATCTTCAAATGCAA  50
      |||||  ||||| | |||| |||| |||||||||| ||||||||||||||
seq2  CAGCA--GACAT-GAGACTAAACC-TGAGAGTCCA-ATCTTCAAATGCAA  45

seq1  GCATGAGGCAGAGAGAACAGGAAGTGGGTAGCCTTATAAACCGGTAAAGT  100
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  GCATGA-GCAGAGAG-ACAGGAAGTGGGTAGCCTTATAAACCGGTAAAGT  93

seq1  CTGCCTGCAATGGCGTACTTCTCATAGCAGGGCTCTACCTCCTGAAAGTT  150
      ||||||||||| ||||||||||||||||| |||||| ||| |||||||||
seq2  CTGCCTGCAAT-GCGTACTTCTCATAGCA-GGCTCTCCCT-CTGAAAGTT  140

seq1  CCACAGCCTTCCCCCCAACAGCATCACCAGCTAGAGATCTCTAAGTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTTCCCCCCAACAGCATCACCAGCTAGAGATCTCTAAGTCTTC  190

seq1  AGTCTTCAAATGTGGGAGCTTGTGAAGGATATTTTTAGTCACACACACAC  250
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  AGTCTTCAAATGTGGGAGCTTGTGAAGGA-AATTTTAGTCACACACACAC  239

seq1  CCCCAACCCCGCCATGAGTAAGTTTTTAAGAGCAAAACAAGGGAACCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACCCCGCCATGAGTAAGTTTTTAAGAGCAAAACAAGGGAACCAGG  289

seq1  ACGAGAACCAGGTGTAAGATGAGAATGATAATGTGTGTCCACAGCCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAACCAGGTGTAAGATGAGAATGATAATGTGTGTCCACAGCCATCC  339

seq1  TGCCCTGAATGTATCCAAAGCTAAGCAGGGTCTGGTCTGGTTGATCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGAATGTATCCAAAGCTAAGCAGGGTCTGGTCTGGTTGATCTTAG  389

seq1  TACTTGATGGAAGAGGATAATGGACCGTCTTTCTATGTGCTCAATTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGATGGAAGAGGATAATGGACCGTCTTTCTATGTGCTCAATTACAA  439

seq1  GCAAAGCCTGACATGGCAGATAGGAAGACACCATCTAAATGGCAATTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCTGACATGGCAGATAGGAAGACACCATCTAAATGGCAATTCAG  489

seq1  AAGAAAAATATAGACAAGAAAATTAAAGTACTTGAGGAAAACCTGTACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATATAGACAAGAAAATTAAAGTACTTGAGGAAAACCTGTACTT  539

seq1  CTGTTCGGATTGCTTATTTTGTTTTGTTTCCACAGTGATGGGGATGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCGGATTGCTTATTTTGTTTTGTTTCCACAGTGATGGGGATGAATT  589

seq1  CAGGGTCTAGATTAATCTCAGGGCCTCACACACACTAGGCAAGTGCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTAGATTAATCTCAGGGCCTCACACACACTAGGCAAGTGCTGTA  639

seq1  CCCAGCAAATACCCCTTAAAAATGTGGTGTTCACCAGAATAGAGTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAAATACCCCTTAAAAATGTGGTGTTCACCAGAATAGAGTCAGAT  689

seq1  CCCCAACTCCTGAAGTGTTTTATTTAAAACTATACATTAGGTTAACGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTCCTGAAGTGTTTTATTTAAAACTATACATTAGGTTAACGTGT  739

seq1  AAGTTTCATGCAGTATCAACAAAAATGCTAATAAGTTGTTTTCTGAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCATGCAGTATCAACAAAAATGCTAATAAGTTGTTTTCTGAAATC  789

seq1  AAATAGGTATTTTCTAAATTTTATATTAAAAACGGAAAATAGCTTTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGTATTTTCTAAATTTTATATTAAAAACGGAAAATAGCTTTAAAA  839

seq1  TGTAAAGATGGAACGATGAAGAGAGACTTACTAGATATTAATCGTATCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGATGGAACGATGAAGAGAGACTTACTAGATATTAATCGTATCTG  889

seq1  GTAAAATATTAAAAATATGATAAAGCCTCTGATTAAAACAGTGTATTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATATTAAAAATATGATAAAGCCTCTGATTAAAACAGTGTATTGTT  939

seq1  GGAACATAATTCAGCAAAACAATGGAAGATATGGAATTC  989
      |||||||||||||||||||||||||||||||||||||||
seq2  GGAACATAATTCAGCAAAACAATGGAAGATATGGAATTC  978