BAC Information

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BAC

Clone NameB6Ng01-048K17
Chromosome7 (Build37)
Map Location 145,495,465 - 145,496,532
singlet/doubletsinglet
Overlap geneTcerg1l
Upstream geneEbf3, 9430038I01Rik, Txnl2, LOC435235
Downstream geneLOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048K17.bB6Ng01-048K17.g
ACCDH873162DH873163
length1,1551,054
definitionDH873162|Mus musculus domesticus DNA, BAC clone: B6Ng01-048K17, 5' end.DH873163|Mus musculus domesticus DNA, BAC clone: B6Ng01-048K17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatggctggtgggcacagaaatcttacattattagccatcagga
aagtgacaatgacacgagagtaagactccattctcactcacctttggatt
tgttacttttctgctgttgtgataaaataccatgactaaggcaacttata
gaagaaagagcttactgcgcttgtgttttcagcggataggagtccattgt
gtcaggaagccatggcagcaaccagcaggcatggggcaggagcaggacgc
tgagagctcataccttcaaatataagcacaaagcagagagcgcaaactgg
aagggacacaaggcttttaacctcaaaacctatccccagtgacataggct
tcatcaaggctaaacctaaaccacataaacctccccaaacagccaccgac
caggattcaagtgctcagatgcccaaagaccatggggcggggggcatttc
tcatataaatcaccataccctgtaggcatcgagagggaaaagtgcatagt
gatatatcattggtcgaaatctagagagatcaaagctgtcccacccatca
cagtgggattgcaagctagcagagccctctggagggagcagagcagctcc
tctacagttgatacagggtgaccttgtgattcaggaggtccattcctagg
tacaaacccaagagatgtgcaaagccatgtgcatttcacatttactcgca
ggagaagaggatcacaagaacaacccaacggccatcaactcatgtgtgga
tatagtacatgtggtctggatactattcagcagtctaaaaaaataaaaat
gaatgtccatgcatgcttcaacatagacaggcaatgggaagaactgaaag
caagttgtcacaaatcatgtgtcctaggactgtttccgtaaacatctaca
tagatgtttaatagaccagaccctacaggtgagatgttgttgttgtttta
aaagattgcatctaggtgacagggaggagtggaaaaggagacctaggctc
tttcaggcatgaaattcttgactctgctgcggggatggacactgacctac
cttaggtcatcatcactggtggctgaaatgggggtgtgggaggattgaat
tcaccctatacccgctcagggagggcactgatggatcgactgtctccagt
acacg
gaattcaagcccactgtctgcctgtcccacatcttcagactccttctcaa
cctataatttcaacagtctcatcatcaaagcccagctagagcacagagcc
agcttaccagtgcttttgccctgtctttggtcaacttttctagggaagag
gtagagacatcttagagttcaagatcctttctcagcccagcttaagcaaa
taatctagactctggaaagccatgaattacttgaacagaaacatggatta
ggtttactgataatctctagttaatgtgaagaataaagtggattctcgcc
tactgtaattacaatttaaataggaatttttgtttcaaaaagcattaaga
gagcaattagaatgttaatgaacatttttacacacccatggtataaccag
tgaaatagttctatcattacaagtgtgaatattctagataaatgtcctta
taaatatagaacgaatcgcctttgccccttggagctagccacctcctctg
cgtaatcaccctgactctcattccacaggacccggcagctgaggacccat
ctgtcttcccactacagccacatacactgcctcagagctgggcagcaatt
acacttcacagttatttaaggagccattaaaataagttctgaaataaacc
attgtgtaattgtctaaatgcatgtaattatttaaataactttcaacgta
agaagtttgtatgttttaatattaatcttcaaatataaacacttcttaaa
tattgcctgttcagataccaaaattctaattagaccaccctcagaacagc
agcatgacagccatttttcacctggaaacacagccttccttgatcagacc
acatccttgtccctgtaaattcacaagagagccatttccactgaaagtga
gattagatctagaagatacatttctgagttctgttaattaaatatatata
tatattttttttctgcagaaggagcatcatgagaaattattataacttgt
aggaattaaagtcctacccagactcaagcctcctgctcttccatccctca
gcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145495465_145496532
seq2: B6Ng01-048K17.g_68_1121

seq1  GAATTCAAGCCCACTGTCTGCCTGTCCCACATCTTCAGACTCCTTCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCCACTGTCTGCCTGTCCCACATCTTCAGACTCCTTCTCAA  50

seq1  CCTATAATTTCAACAGTCTCATCATCAAAGCCCAGCTAGAGCACAGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAATTTCAACAGTCTCATCATCAAAGCCCAGCTAGAGCACAGAGCC  100

seq1  AGCTTACCAGTGCTTTTGCCCTGTCTTTGGTCAACTTTTCTAGGGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACCAGTGCTTTTGCCCTGTCTTTGGTCAACTTTTCTAGGGAAGAG  150

seq1  GTAGAGACATCTTAGAGTTCAAGATCCTTTCTCAGCCCAGCTTAAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGACATCTTAGAGTTCAAGATCCTTTCTCAGCCCAGCTTAAGCAAA  200

seq1  TAATCTAGACTCTGGAAAGCCATGAATTACTTGAACAGAAACATGGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAGACTCTGGAAAGCCATGAATTACTTGAACAGAAACATGGATTA  250

seq1  GGTTTACTGATAATCTCTAGTTAATGTGAAGAATAAAGTGGATTCTCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACTGATAATCTCTAGTTAATGTGAAGAATAAAGTGGATTCTCGCC  300

seq1  TACTGTAATTACAATTTAAATAGGAATTTTTGTTTCAAAAAGCATTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAATTACAATTTAAATAGGAATTTTTGTTTCAAAAAGCATTAAGA  350

seq1  GAGCAATTAGAATGTTAATGAACATTTTTACACACCCATGGTATAACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTAGAATGTTAATGAACATTTTTACACACCCATGGTATAACCAG  400

seq1  TGAAATAGTTCTATCATTACAAGTGTGAATATTCTAGATAAATGTCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGTTCTATCATTACAAGTGTGAATATTCTAGATAAATGTCCTTA  450

seq1  TAAATATAGAACGAATCGCCTTTGCCCCTTGGAGCTAGCCACCTCCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAGAACGAATCGCCTTTGCCCCTTGGAGCTAGCCACCTCCTCTG  500

seq1  CGTAATCACCCTGACTCTCATTCCACAGGACCCGGCAGCTGAGGACCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATCACCCTGACTCTCATTCCACAGGACCCGGCAGCTGAGGACCCAT  550

seq1  CTGTCTTCCCACTACAGCCACATACACTGCCTCAGAGCTGGGCAGCAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCCCACTACAGCCACATACACTGCCTCAGAGCTGGGCAGCAATT  600

seq1  ACACTTCACAGTTATTTAAGGAGCCATTAAAATAAGTTCTGAAATAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCACAGTTATTTAAGGAGCCATTAAAATAAGTTCTGAAATAAACC  650

seq1  ATTGTGTAATTGTCTAAATGCATGTAATTATTTAAATAACTTTCAACGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTGTGTAATTGTCTAAATGCATGTAATTATTTAAATAACTTTCAACGT-  699

seq1  AAGAAGTTTGTATGTTTTTAATATTAATCTTCAAATATAAACACTTCTTA  750
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTTGTATG-TTTTAATATTAATCTTCAAATATAAACACTTCTTA  748

seq1  AATATTGCCTGTTCAGATACCAAAATTCTAATTAGACCACCCTCAGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCCTGTTCAGATACCAAAATTCTAATTAGACCACCCTCAGAACA  798

seq1  GCAGCATGACAGCCATTTTTCACCTGGAAACACAGCCTTCCTTGATCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATGACAGCCATTTTTCACCTGGAAACACAGCCTTCCTTGATCAGA  848

seq1  CCACATCC-TGTCCCTGTAAATTCACAAGAGGAGCCA-TTCCACTGGAAG  898
      |||||||| ||||||||||||||||||||| |||||| |||||||| |||
seq2  CCACATCCTTGTCCCTGTAAATTCACAAGA-GAGCCATTTCCACTGAAAG  897

seq1  TGAGAATTAGAATCTAGAAGATACATTTCTGAG-TCTGTTAAATATATAT  947
      |||| ||||| |||||||||||||||||||||| |||||||| || ||||
seq2  TGAG-ATTAG-ATCTAGAAGATACATTTCTGAGTTCTGTTAATTAAATAT  945

seq1  ATATATATATTTTTTTTTTCCTGCAGAAGGAGCATCATGAGAAAATTATT  997
      |||||||||||||||||   ||||||||||||||||||||| ||||||||
seq2  ATATATATATTTTTTTT---CTGCAGAAGGAGCATCATGAG-AAATTATT  991

seq1  ATTACCTGGAGGAAATAAAAGTCCTACCCAAGACTCAAAGCCTTCCCCTG  1047
      || || || ||| ||| |||||||||||| |||||| ||||||   ||||
seq2  ATAACTTGTAGG-AATTAAAGTCCTACCC-AGACTC-AAGCCT---CCTG  1035

seq1  CTCTCCTCATCCCTACAGCAT  1068
      |||| | ||||||| ||||||
seq2  CTCTTC-CATCCCT-CAGCAT  1054