BAC Information

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BAC

Clone NameB6Ng01-048O18
Chromosome7 (Build37)
Map Location 13,395,928 - 13,509,825
singlet/doubletdoublet
Overlap geneZfp329, Zfp110, Zfp128, Zscan22, Rps5
Upstream geneEG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515
Downstream gene2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048O18.bB6Ng01-048O18.g
ACCDH873338DH873339
length1,010983
definitionDH873338|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O18, 5' end.DH873339|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,508,792 - 13,509,825)(13,395,928 - 13,396,568)
sequence
gaattcactatgtagtacagtgtggtcctatacttagagatctgccagag
tgctgggcttaaatgcacacaccattgattcaagatgctaaggacacttg
ggactcctcaaagaagggagggctgtcctgtgtagtttaaggacacttgg
cagcacaccagcacttgacagattattctggaccacctgtgagacaaaac
cacatttattaacctacctgttgcctaagaagttcgaagtgtgtacacac
tgtgtctcagtaacaatgtgtgttggcctagcatgtgaaaaagccctggc
tctaatcgctaacacaaaaaggattgcagacctccccaaataaactcaca
aagtaaactaaacactcactagacaagactgaaaatcttttagattaatg
cctaggtcctgctgtttctttttcccttctattttgggcatgtacgcaag
tcaggggacaatttgcagctgtcagttctattcttctaccttggattcaa
aggattaaacttatattgtcaggctttgtggtaactgtctttataggctg
aaccaccttacaagctcattctgtggtatctttacagacagtagacatac
tttaattcctttgaacaaaatagacaactgggccgaaagatatagctgag
ttggtagggtgcttgctttgtaaaaagccctgggttcaatgtcaagtagt
gggataaacttggaatggtgatatataccttcaatcccagcactcgggac
agaatgcagatattagctttttccactagacagggtttcagccagtctca
gctatatgagattacctcaaaatgggttatgagggcaaagcaaatagctc
ccatactaacttagccataacagtacccatagccaactgacattttcatg
ggaggcagcaggacattcatagcacactgtctcatactcaatctctgctg
tagctgatagcagctacactgctttgacaaggtgcacatggtcagtgact
aagcatcttt
gaattctctgatgcttggtcagacaggagctatccctaaaagctttacca
cactgattgcactcataaggcctttcaccagtatgaattctctggtgccg
gataagtccagcaatgttcctgaagagtttacgacactggttacaaccgt
acggcttctcaccagtgtggaccctctgatgcctgatgagatatgcactc
tcaatgaaagttttcccacactctttacattcatagggcttctccccaga
atgaattttctgatgcacaatgaggtgagagttgcgactgaaggatttcc
cacactctacacattcaaaaggcttctctccagtgtgtgtcctctcatgc
tgagtgaggtatgagccatctcggaaagcctttccacatctgctacactc
atagggcttctctccagtgtggattctgagatgcacagtaaggtgagaaa
tgtcagtgaagggcttcccacattcattacatctatatggtttttcccct
gtatgagttctttgatgcaaaatcagggatgaatttctgttgaacgtttt
tccgcaatctagacatgcataaggcttctcacctgtgtgaatcctctggt
gttgtgtcagtgctgacccatcactgaaagctttcccacacttactgcat
ttatagggtttctctcctgtatgaatcctttcgatgtacaatcaagttgt
agttcttggagaatgattttccgcaatcattacaggtatacggtttctct
ccagtgtgagtccgatggtgtaaaaccagagaggagttccgtttgaagca
cttgccacattcggcacattttatacggtttctcagcagaatgacttctt
ttttcattaagagatgagctcaggctagatgtccccaaagtccttacctt
tataatctctgcttcttttctattttttatcacaagggcagtgtaagtgg
ttaggatttacactttctggtgtattaaggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13508792_13509825
seq2: B6Ng01-048O18.b_48_1057 (reverse)

seq1  AAAGATGGCTTTAGTCAACTGAACCATGTTGGCACCCTTGTCAAAAGCAG  50
      |||||||   |||||| |||| |||||||  ||| ||||||| |||||||
seq2  AAAGATG--CTTAGTC-ACTG-ACCATGT--GCA-CCTTGTC-AAAGCAG  42

seq1  TTGGTAAGCTGCTATCAGCCTACAGCAAGAGGAATTTGAGTATGAGACCA  100
      |  || |||||||||||| ||||||||    ||  |||||||||||| ||
seq2  T--GT-AGCTGCTATCAG-CTACAGCA----GAGATTGAGTATGAGA-CA  83

seq1  GTTGGTGCTATGAATGTTCCCTGCTGCCCTCCCCTGAAAAATGTCAGTTG  150
      ||  |||||||||||||  ||||||| |||||| || |||||||||||||
seq2  GT--GTGCTATGAATGT--CCTGCTG-CCTCCCATG-AAAATGTCAGTTG  127

seq1  GCTATGGGTACTGTTATGGCTAAGTTAGTATGGGAGCTATTTGCTTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGGTACTGTTATGGCTAAGTTAGTATGGGAGCTATTTGCTTTGCC  177

seq1  CTCATAACCCATTTTGAGGTAATCTCATATAGCTGAGACTGGCCTGAAAC  250
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCATAACCCATTTTGAGGTAATCTCATATAGCTGAGACTGG-CTGAAAC  226

seq1  CCTGTCTAGTGGAAAAAGCTAATATCTGCATTCTGTCCCGAGTGCTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTAGTGGAAAAAGCTAATATCTGCATTCTGTCCCGAGTGCTGGGA  276

seq1  TTGAAGGTATATATCACCATTCCAAGTTTATCCCACTACTTGACATTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGTATATATCACCATTCCAAGTTTATCCCACTACTTGACATTGAA  326

seq1  CCCAGGGCTTTTTACAAAGCAAGCACCCTACCAACTCAGCTATATCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCTTTTTACAAAGCAAGCACCCTACCAACTCAGCTATATCTTTC  376

seq1  GGCCCAGTTGTCTATTTTGTTCAAAGGAATTAAAGTATGTCTACTGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGTTGTCTATTTTGTTCAAAGGAATTAAAGTATGTCTACTGTCTG  426

seq1  TAAAGATACCACAGAATGAGCTTGTAAGGTGGTTCAGCCTATAAAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATACCACAGAATGAGCTTGTAAGGTGGTTCAGCCTATAAAGACAG  476

seq1  TTACCACAAAGCCTGACAATATAAGTTTAATCCTTTGAATCCAAGGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACAAAGCCTGACAATATAAGTTTAATCCTTTGAATCCAAGGTAGA  526

seq1  AGAATAGAACTGACAGCTGCAAATTGTCCCCTGACTTGCGTACATGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAACTGACAGCTGCAAATTGTCCCCTGACTTGCGTACATGCCCA  576

seq1  AAATAGAAGGGAAAAAGAAACAGCAGGACCTAGGCATTAATCTAAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGGGAAAAAGAAACAGCAGGACCTAGGCATTAATCTAAAAGAT  626

seq1  TTTCAGTCTTGTCTAGTGAGTGTTTAGTTTACTTTGTGAGTTTATTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTCTTGTCTAGTGAGTGTTTAGTTTACTTTGTGAGTTTATTTGGG  676

seq1  GAGGTCTGCAATCCTTTTTGTGTTAGCGATTAGAGCCAGGGCTTTTTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGCAATCCTTTTTGTGTTAGCGATTAGAGCCAGGGCTTTTTCAC  726

seq1  ATGCTAGGCCAACACACATTGTTACTGAGACACAGTGTGTACACACTTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGGCCAACACACATTGTTACTGAGACACAGTGTGTACACACTTCG  776

seq1  AACTTCTTAGGCAACAGGTAGGTTAATAAATGTGGTTTTGTCTCACAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTAGGCAACAGGTAGGTTAATAAATGTGGTTTTGTCTCACAGGT  826

seq1  GGTCCAGAATAATCTGTCAAGTGCTGGTGTGCTGCCAAGTGTCCTTAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGAATAATCTGTCAAGTGCTGGTGTGCTGCCAAGTGTCCTTAAAC  876

seq1  TACACAGGACAGCCCTCCCTTCTTTGAGGAGTCCCAAGTGTCCTTAGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGACAGCCCTCCCTTCTTTGAGGAGTCCCAAGTGTCCTTAGCAT  926

seq1  CTTGAATCAATGGTGTGTGCATTTAAGCCCAGCACTCTGGCAGATCTCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATCAATGGTGTGTGCATTTAAGCCCAGCACTCTGGCAGATCTCTA  976

seq1  AGTATAGGACCACACTGTACTACATAGTGAATTC  1034
      ||||||||||||||||||||||||||||||||||
seq2  AGTATAGGACCACACTGTACTACATAGTGAATTC  1010

seq1: chr7_13395928_13396568
seq2: B6Ng01-048O18.g_422_1049

seq1  GAGGTATGAGCCATCTCGGAAAGCCTTTCCACATCTGCTACACTCATAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATGAGCCATCTCGGAAAGCCTTTCCACATCTGCTACACTCATAGG  50

seq1  GCTTCTCTCCAGTGTGGATTCTGAGATGCACAGTAAGGTGAGAAATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTCCAGTGTGGATTCTGAGATGCACAGTAAGGTGAGAAATGTCA  100

seq1  GTGAAGGGCTTCCCACATTCATTACATCTATATGGTTTTTCCCCTGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGGCTTCCCACATTCATTACATCTATATGGTTTTTCCCCTGTATG  150

seq1  AGTTCTTTGATGCAAAATCAGGGATGAATTTCTGTTGAACGTTTTTCCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTGATGCAAAATCAGGGATGAATTTCTGTTGAACGTTTTTCCGC  200

seq1  AATCTAGACATGCATAAGGCTTCTCACCTGTGTGAATCCTCTGGTGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGACATGCATAAGGCTTCTCACCTGTGTGAATCCTCTGGTGTTGT  250

seq1  GTCAGTGCTGACCCATCACTGAAAGCTTTCCCACACTTACTGCATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGCTGACCCATCACTGAAAGCTTTCCCACACTTACTGCATTTATA  300

seq1  GGGTTTCTCTCCTGTATGAATCC-TTCGATGTACAATCAAGTTGTAGTTC  349
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGGTTTCTCTCCTGTATGAATCCTTTCGATGTACAATCAAGTTGTAGTTC  350

seq1  TTGGAGAATGATTTTCCGCAATCATTACAGGTATACGGTTTCTCTCCAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAATGATTTTCCGCAATCATTACAGGTATACGGTTTCTCTCCAGT  400

seq1  GTGAGTCCGATGGTGTAAAACCAGAGAGGAGTTCCGTTTGAAGCACTTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCGATGGTGTAAAACCAGAGAGGAGTTCCGTTTGAAGCACTTGC  450

seq1  CACATTCGGCACA-TTTATACGGTTTCTCAGCAGAATGACTTCTTTTTTC  498
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACATTCGGCACATTTTATACGGTTTCTCAGCAGAATGACTTCTTTTTTC  500

seq1  ATTAAGAGATGAGCTCAGGGCTAAGATGTCCCCAAAGTCCTTACCTTTAT  548
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  ATTAAGAGATGAGCTCA-GGCT-AGATGTCCCCAAAGTCCTTACCTTTAT  548

seq1  AAAATCTCTTGCTTCTTTTCTTAATTTTTTTATCACAAAGGGCAGTGGTA  598
        |||||| ||||||||||||    ||||||||||| ||||||||||   
seq2  --AATCTC-TGCTTCTTTTCT---ATTTTTTATCAC-AAGGGCAGTG--T  589

seq1  AAGTGGTTTAAGGATTTAACACTTTCT-GTGTATTTATAGGATT  641
      ||||||||  ||||||| ||||||||| |||||||   ||||||
seq2  AAGTGGTT--AGGATTT-ACACTTTCTGGTGTATT--AAGGATT  628