BAC Information

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BAC

Clone NameB6Ng01-049I22
Chromosome7 (Build37)
Map Location 101,253,874 - 101,364,576
singlet/doubletdoublet
Overlap geneEG545982
Upstream geneLOC100040298, LOC666783, EG638305
Downstream geneEG666816, LOC100040132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049I22.bB6Ng01-049I22.g
ACCDH873783DH873784
length1,015991
definitionDH873783|Mus musculus domesticus DNA, BAC clone: B6Ng01-049I22, 5' end.DH873784|Mus musculus domesticus DNA, BAC clone: B6Ng01-049I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,253,874 - 101,254,924)(101,363,562 - 101,364,576)
sequence
gaattctataatatagaatgagctagtatttcttttatcaatgagcattt
atagtttattttctgcacaaatagtttatttatgaatagttatctgcatt
tatagtttattttcatggatacattcttaattagtaagaactgagtacca
tgcatacacacacatatatattatcttatataatggacacacttcaaatt
ttgaatatttcttggcacaatctatgtatattaaaagggtaacattcatg
ttatctttgttttttttttttttttccatttgtgcttttgtcaaaggatt
cttaattaggatccctcactcataatctacataagctctaattgtcattg
taattatacagacctggaaggatatttattcagaatcacagaggaacgat
tcttagagctaggttacccattaggactgctaccctccagcctggctttt
cccactctaagaaataccacacacaacacaattatgtatgttttctgcct
tccagtttccaaataaaacctctacatgtgtatacattatttgatattgc
ctgccccctactacctgtatgaaatatcaacatacattttataaaattat
tttcatctcagtagcatgtagatgtgggtgataatttatcttctgttttt
atatggaatcattaaaaaccaatattatcaaattactcgtgcaaactcaa
atcagaattgagattgagttaagtttaagccttcagtctctgatttcaca
gatcattgatagttacaactatttgttatcttcagtaaataacaaaacat
ctgaggaaaatgctactgagatactgaacccatagacatttagtttgtgt
ctcaggactctctctccacacacccagattcatgtgaatactatgctgtg
aatagctgttgaaaaatgcatatttaatatgtttgtgctactacatacta
actctatagaggtaaagtcaagtggctttaaatttttgagaaatttaagt
agattgggtttattt
gaattccaccgcattctccaagagaaatcagtgactcccaggtgggtgac
acaaatgccagtgaaagctaggaggtacaccctggaaatctgaaaataag
ggcaggaaatgtaattggcctgccttggaagacatttatgctttttcatt
tttgtgttttattgttcctttctcctggacttggaaagactcagtagtat
ctactgccaaaatttcatacttttcttatttctatgaaaaggcaagtaat
tggttttttatttactcaattccagtcttgctcatacattttttgctttc
ttttgttaataagcctggactacttaagcacaagagagagagaaaaggag
agagacagagagagacaccgtgagagagacggagagacaaagagacagag
acaaacagaaacacacacacacacacacagagagagagagagagagagag
agagagagagagagagagagagagagagagagagagagaagcaggctaag
ccagaacttgaccttgctgccactaaggagattacctagggtggagcctt
cctccctagatcactctattgttcagcaactgctgctgttcctcctgcgg
agaggccccaacaagaaaatactttgtagggtgtttttatataaagttat
tgccagactgttaaatttgttttaaatataagaaaacaaacattctttcc
tctgaatgcaatttgttccactttattttcataaatatcatgtgttgggt
ctgtgtgctccttaggtttcttatagtatatcttaaatacaaatatgata
taaataattcttatagtgcactgcttaagtaagcccacagagacatgcac
aaatacacatgctttctagatatttgatatgtaatgctgaaccacagtac
agtcattcagtttctgtagtgtttacttagcatacccctcgatgtaggat
taatttgacatcctcagttgaagatgattgaatgactgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101253874_101254924
seq2: B6Ng01-049I22.b_46_1060

seq1  GAATTCTATAATATAGAATGAGCTAGTATTTCTTTTATCAATGAGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAATATAGAATGAGCTAGTATTTCTTTTATCAATGAGCATTT  50

seq1  ATAGTTTATTTTCTGCACAAATAGTTTATTTATGAATAGTTATCTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTATTTTCTGCACAAATAGTTTATTTATGAATAGTTATCTGCATT  100

seq1  TATAGTTTATTTTCATGGATACATTCTTAATTAGTAAGAACTGAGTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTATTTTCATGGATACATTCTTAATTAGTAAGAACTGAGTACCA  150

seq1  TGCATACACACACATATATATTATCTTATATAATGGACACACTTCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACACACATATATATTATCTTATATAATGGACACACTTCAAATT  200

seq1  TTGAATATTTCTTGGCACAATCTATGTATATTAAAAGGGTAACATTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTTCTTGGCACAATCTATGTATATTAAAAGGGTAACATTCATG  250

seq1  TTATCTTTGTTTTTTTTTTTTTTTTCCATTTGTGCTTTTGTCAAAGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTGTTTTTTTTTTTTTTTTCCATTTGTGCTTTTGTCAAAGGATT  300

seq1  CTTAATTAGGATCCCTCACTCATAATCTACATAAGCTCTAATTGTCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTAGGATCCCTCACTCATAATCTACATAAGCTCTAATTGTCATTG  350

seq1  TAATTATACAGACCTGGAAGGATATTTATTCAGAATCACAGAGGAACGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATACAGACCTGGAAGGATATTTATTCAGAATCACAGAGGAACGAT  400

seq1  TCTTAGAGCTAGGTTACCCATTAGGACTGCTACCCTCCAGCCTGGCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAGCTAGGTTACCCATTAGGACTGCTACCCTCCAGCCTGGCTTTT  450

seq1  CCCACTCTAAGAAATACCACACACAACACAATTATGTATGTTTTCTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTAAGAAATACCACACACAACACAATTATGTATGTTTTCTGCCT  500

seq1  TCCAGTTTCCAAATAAAACCTCTACATGTGTATACATTATTTGATATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTCCAAATAAAACCTCTACATGTGTATACATTATTTGATATTGC  550

seq1  CTGCCCCCTACTACCTGTATGAAATATCAACATACATTTTATAAAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCTACTACCTGTATGAAATATCAACATACATTTTATAAAATTAT  600

seq1  TTTCATCTCAGTAGCATGTAGATGTGGGTGATAATTTATCTTCTGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTCAGTAGCATGTAGATGTGGGTGATAATTTATCTTCTGTTTTT  650

seq1  ATATGGAATCATTAAAAACCAATATTATCAAATTACTCGTGCAAACTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAATCATTAAAAACCAATATTATCAAATTACTCGTGCAAACTCAA  700

seq1  ATCAGAATTGAGATTGAGTTAAGTTTAAGCCTTCAGTCTCTGATTTCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATTGAGATTGAGTTAAGTTTAAGCCTTCAGTCTCTGATTTCACA  750

seq1  GATCATTGATAGTTACAACTATTTGTTATCTTCAGTAAATAACAAAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGATAGTTACAACTATTTGTTATCTTCAGTAAATAACAAAACAT  800

seq1  CTGAGGAAAAATGCTACTGAGATAACTGAACCCATAGACATTTAGTTTGT  850
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGAGG-AAAATGCTACTGAGAT-ACTGAACCCATAGACATTTAGTTTGT  848

seq1  GTCCTCAGGGAACTCTCTCTCCAACACACCCAGATTTCATTGTTGAAATA  900
      || ||||||  ||||||||||| ||||||||||| |||| |||   ||||
seq2  GT-CTCAGG--ACTCTCTCTCC-ACACACCCAGA-TTCA-TGT--GAATA  890

seq1  CTTATGCTGTTGAAATAAGCTGTTTGAAAAAAATGCAAATAATTTAAATA  950
      | ||||||| ||||   |||||||    ||||||||| |    || ||||
seq2  C-TATGCTG-TGAA--TAGCTGTT---GAAAAATGCATA----TTTAATA  929

seq1  TGGTTATGTGCTACTACATACCTTAAAACTCTTATAGAAGGTAAAAAGTC  1000
      ||  | |||||||||||||||     ||||| ||||| ||||  ||||||
seq2  TG--TTTGTGCTACTACATAC----TAACTC-TATAG-AGGT--AAAGTC  969

seq1  AAAGTGCTTTAAATTTTGTGAGATATTTAAAAGTTAGATTGTGTTTTATT  1050
      ||   |||||||||||| ||||| ||||||    ||||||| | ||||||
seq2  AAGTGGCTTTAAATTTT-TGAGAAATTTAA---GTAGATTG-GGTTTATT  1014

seq1  T  1051
      |
seq2  T  1015

seq1: chr7_101363562_101364576
seq2: B6Ng01-049I22.g_67_1057 (reverse)

seq1  AAGCAGTTCATTTCAACTCAATTCTTCAACTGAGGGATGTCAAATATAAT  50
      |||||| ||| ||||| |||  ||||||||||| ||||||||||| ||||
seq2  AAGCAG-TCA-TTCAA-TCA--TCTTCAACTGA-GGATGTCAAAT-TAAT  43

seq1  CCCTACATCGGAGGGGTTATGCTAAGTAAAACACTAACAGAAAACTGAAT  100
       |||||||| |||||| |||||||||| ||||||| |||| |||||||||
seq2  -CCTACATC-GAGGGG-TATGCTAAGT-AAACACT-ACAG-AAACTGAAT  87

seq1  GACTGTACTTGTGGGTTCAAGCATTTACATATCAAAATTATCTAGAAAGC  150
      |||||||| ||| ||||| |||| ||||||||||||  ||||||||||||
seq2  GACTGTAC-TGT-GGTTC-AGCA-TTACATATCAAA--TATCTAGAAAGC  131

seq1  ATGTGTATTTGTTGCATGTTCTCTTGTTGGGCTTACTTAAGCAGTGCACT  200
      ||||||||||| |||||| |||||   |||||||||||||||||||||||
seq2  ATGTGTATTTG-TGCATG-TCTCT--GTGGGCTTACTTAAGCAGTGCACT  177

seq1  ATAAGAATTATTTATATCATATTTGTATTTTAAGATATACTATAAGAAAC  250
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATAAGAATTATTTATATCATATTTGTA-TTTAAGATATACTATAAGAAAC  226

seq1  CTAAGGAGCACACAGACCCAACACATGATATTTATGAAAATAAAGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGCACACAGACCCAACACATGATATTTATGAAAATAAAGTGGAA  276

seq1  CAAATTGCATTCAGAGGAAAGAATGTTTGTTTTCTTATATTTAAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGCATTCAGAGGAAAGAATGTTTGTTTTCTTATATTTAAAACAAA  326

seq1  TTTAACAGTCTGGCAATAACTTTATATAAAAACACCCTACAAAGTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGTCTGGCAATAACTTTATATAAAAACACCCTACAAAGTATTTT  376

seq1  CTTGTTGGGGCCTCTCCGCAGGAGGAACAGCAGCAGTTGCTGAACAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGGGCCTCTCCGCAGGAGGAACAGCAGCAGTTGCTGAACAATAG  426

seq1  AGTGATCTAGGGAGGAAGGCTCCACCCTAGGTAATCTCCTTAGTGGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTAGGGAGGAAGGCTCCACCCTAGGTAATCTCCTTAGTGGCAGC  476

seq1  AAGGTCAAGTTCTGGCTTAGCCTGCTTCTCTCTCTCTCTCTCTCTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAAGTTCTGGCTTAGCCTGCTTCTCTCTCTCTCTCTCTCTCTCTC  526

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTG  576

seq1  TGTGTTTCTGTTTGTCTCTGTCTCTTTGTCTCTCCGTCTCTCTCACGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTGTTTGTCTCTGTCTCTTTGTCTCTCCGTCTCTCTCACGGTG  626

seq1  TCTCTCTCTGTCTCTCTCCTTTTCTCTCTCTCTTGTGCTTAAGTAGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTCTCTCTCCTTTTCTCTCTCTCTTGTGCTTAAGTAGTCCA  676

seq1  GGCTTATTAACAAAAGAAAGCAAAAAATGTATGAGCAAGACTGGAATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTAACAAAAGAAAGCAAAAAATGTATGAGCAAGACTGGAATTGA  726

seq1  GTAAATAAAAAACCAATTACTTGCCTTTTCATAGAAATAAGAAAAGTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAAAAACCAATTACTTGCCTTTTCATAGAAATAAGAAAAGTATG  776

seq1  AAATTTTGGCAGTAGATACTACTGAGTCTTTCCAAGTCCAGGAGAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGGCAGTAGATACTACTGAGTCTTTCCAAGTCCAGGAGAAAGGA  826

seq1  ACAATAAAACACAAAAATGAAAAAGCATAAATGTCTTCCAAGGCAGGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAAACACAAAAATGAAAAAGCATAAATGTCTTCCAAGGCAGGCCA  876

seq1  ATTACATTTCCTGCCCTTATTTTCAGATTTCCAGGGTGTACCTCCTAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTCCTGCCCTTATTTTCAGATTTCCAGGGTGTACCTCCTAGCT  926

seq1  TTCACTGGCATTTGTGTCACCCACCTGGGAGTCACTGATTTCTCTTGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGCATTTGTGTCACCCACCTGGGAGTCACTGATTTCTCTTGGAG  976

seq1  AATGCGGTGGAATTC  1015
      |||||||||||||||
seq2  AATGCGGTGGAATTC  991