BAC Information

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BAC

Clone NameB6Ng01-049J11
Chromosome7 (Build37)
Map Location 114,357,512 - 114,419,113
singlet/doubletdoublet
Overlap genenone
Upstream geneGvin1, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik
Downstream geneSyt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049J11.bB6Ng01-049J11.g
ACCDH873809DH873810
length800892
definitionDH873809|Mus musculus domesticus DNA, BAC clone: B6Ng01-049J11, 5' end.DH873810|Mus musculus domesticus DNA, BAC clone: B6Ng01-049J11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,357,512 - 114,358,311)(114,418,215 - 114,419,113)
sequence
gaattcctgtcccacctgtcactctctcccaggtgcttagactacaggta
tgcctttccacactaaatccatatttatttgggaagcaaaaacttttctg
caattaacattacttaatgaatagtaatcataatgttaaagctatttata
actagctagggctgctatgacatttctttaaatatgtggtctccacacac
atccccttttagtttatattttgagagcaatgagatttcattttcttaaa
atatttcttttcagggacagtgactctgctctcattaatgtttttctcct
tggagcagaatttagaactgaccaaacagaatcaggctgtattatataaa
ttccctatggaggtaaaaaaaaaaattccttttagaatctgcctgttgtt
tatgcagtgatgttggttctaaggataatatctgtcacaggatagacctt
ctaaaaatgagtttttaaagattcaacaacaaatatgtatagataacacg
gaatgtcatttatccagcacaaaacttacctctagagcaattgcagagca
ctaaaagcagtgaccccactgagctgaatgcctgttgggaaagttttgtt
ttgttttgttttgtttgtttttagggtgcacaggggcggggaaggaagca
gcagtccagcttcctctttttgcctggaggctactggcttagtggagaca
acacttgtgcacaggtgctgccttcattgtggaatccatttgcttgggca
agtttcttaaaggattttctctctctccctctctctctctccccctctcc

gaattcaactcctaggacccacatggcagaaggaatgaatgtactgcaag
ctggtcttgtcccaatttccacataagcacagtggcatgggcacatgcgc
aaatacatacacaaacacacacacaatgtatgtatgtctgtgtgtatata
tgtatatatatccatcctaattaggctcataaattaaaaaatatcataaa
aatctaaagacaaaaactatgaggaaacctcaggagcctcaccatacctt
tcagatacatctatattgctatattgattggattttctggaaaggaaagc
cagcaaaaacccatttttagtgcatatgctacatattaagaaaggaaacc
tcaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaaggaaacctccagaagtcggcagttgaaaaata
gaaaatacttgggttctgcaaattattgctgtgcagggtcatctgtaacc
aggttcttttttagttctccttttctttctttttagggtacagaggattg
aacccagccagagtcccgacttccctaggtcagtgctgcactgctcagct
atttcagctatatcctacctagtccttgatttccttattttcaaacaggg
tctctctaagtcacccaggctggtcctgtacttactctattgctgaagca
tgaattgatcttttggtcctcctgccacagccttttgagatcaaggatta
caggtatgtataggccctgttgaggttattgtgaattacactaaagatta
aagcaatctactttttttaatggaggggtaaaggatgtgtttttaaaggc
aggatctcattacatagccctgattgacttggtcataatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114357512_114358311
seq2: B6Ng01-049J11.b_45_844

seq1  GAATTCCTGTCCCACCTGTCACTCTCTCCCAGGTGCTTAGACTACAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCCACCTGTCACTCTCTCCCAGGTGCTTAGACTACAGGTA  50

seq1  TGCCTTTCCACACTAAATCCATATTTATTTGGGAAGCAAAAACTTTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCCACACTAAATCCATATTTATTTGGGAAGCAAAAACTTTTCTG  100

seq1  CAATTAACATTACTTAATGAATAGTAATCATAATGTTAAAGCTATTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAACATTACTTAATGAATAGTAATCATAATGTTAAAGCTATTTATA  150

seq1  ACTAGCTAGGGCTGCTATGACATTTCTTTAAATATGTGGTCTCCACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTAGGGCTGCTATGACATTTCTTTAAATATGTGGTCTCCACACAC  200

seq1  ATCCCCTTTTAGTTTATATTTTGAGAGCAATGAGATTTCATTTTCTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTTTAGTTTATATTTTGAGAGCAATGAGATTTCATTTTCTTAAA  250

seq1  ATATTTCTTTTCAGGGACAGTGACTCTGCTCTCATTAATGTTTTTCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTTTTCAGGGACAGTGACTCTGCTCTCATTAATGTTTTTCTCCT  300

seq1  TGGAGCAGAATTTAGAACTGACCAAACAGAATCAGGCTGTATTATATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAGAATTTAGAACTGACCAAACAGAATCAGGCTGTATTATATAAA  350

seq1  TTCCCTATGGAGGTAAAAAAAAAAATTCCTTTTAGAATCTGCCTGTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATGGAGGTAAAAAAAAAAATTCCTTTTAGAATCTGCCTGTTGTT  400

seq1  TATGCAGTGATGTTGGTTCTAAGGATAATATCTGTCACAGGATAGACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGTGATGTTGGTTCTAAGGATAATATCTGTCACAGGATAGACCTT  450

seq1  CTAAAAATGAGTTTTTAAAGATTCAACAACAAATATGTATAGATAACACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATGAGTTTTTAAAGATTCAACAACAAATATGTATAGATAACACG  500

seq1  GAATGTCATTTATCCAGCACAAAACTTACCTCTAGAGCAATTGCAGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCATTTATCCAGCACAAAACTTACCTCTAGAGCAATTGCAGAGCA  550

seq1  CTAAAAGCAGTGACCCCACTGAGCTGAATGCCTGTTGGGAAAGTTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGCAGTGACCCCACTGAGCTGAATGCCTGTTGGGAAAGTTTTGTT  600

seq1  TTGTTTTGTTTTGTTTGTTTTTAGGGTGCACAGGGGCGGGGAAGGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTGTTTTTAGGGTGCACAGGGGCGGGGAAGGAAGCA  650

seq1  GCAGTCCAGCTTCCTCTTTTTGCCTGGAGGCTACTGGCTTAGTGGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCAGCTTCCTCTTTTTGCCTGGAGGCTACTGGCTTAGTGGAGACA  700

seq1  ACACTTGTGCACAGGTGCTGCCTTCATTGTGGAATCCATTTGCTTGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGTGCACAGGTGCTGCCTTCATTGTGGAATCCATTTGCTTGGGCA  750

seq1  AGTTTCTTAAAGGATTTTCTCTCTCTCCCTCTCTCTCTCTCCCCCTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTAAAGGATTTTCTCTCTCTCCCTCTCTCTCTCTCCCCCTCTCC  800

seq1: chr7_114418215_114419113
seq2: B6Ng01-049J11.g_67_958 (reverse)

seq1  CATAATATGACCAAGTCAATCAGGGCTATGTAATGAGATCCTGCCTTTAA  50
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATATTATGACCAAGTCAATCAGGGCTATGTAATGAGATCCTGCCTTT-A  49

seq1  AAAACACATTCCTTTACCCCTCCATTTAAAAAAAGTAGATTTGCTTTAAT  100
      |||||||| ||||||||||||||| |||||||||||||| ||||||||||
seq2  AAAACACA-TCCTTTACCCCTCCA-TTAAAAAAAGTAGA-TTGCTTTAAT  96

seq1  CTTTAGTGTTAATTCACAATAACCTCAACAGGGCCTATTACATACCTGTA  150
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  CTTTAGTG-TAATTCACAATAACCTCAACAGGGCCTA-TACATACCTGTA  144

seq1  ATCCTTGATTCTCAAAAGGCTGTGGCAGGAGGACCAAAAGATCAATTCAT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGA-TCTCAAAAGGCTGTGGCAGGAGGACCAAAAGATCAATTCAT  193

seq1  GCTTCAGCAATAGAGTAAGTACAGGACCAGCCTGGGTGACTTAGAGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGCAATAGAGTAAGTACAGGACCAGCCTGGGTGACTTAGAGAGAC  243

seq1  CCTGTTTGAAAATAAGGAAATCAAGGACTAGGTAGGATATAGCTGAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGAAAATAAGGAAATCAAGGACTAGGTAGGATATAGCTGAAATA  293

seq1  GCTGAGCAGTGCAGCACTGACCTAGGGAAGTCGGGACTCTGGCTGGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCAGTGCAGCACTGACCTAGGGAAGTCGGGACTCTGGCTGGGTTC  343

seq1  AATCCTCTGTACCCTAAAAAGAAAGAAAAGGAGAACTAAAAAAGAACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTGTACCCTAAAAAGAAAGAAAAGGAGAACTAAAAAAGAACCTG  393

seq1  GTTACAGATGACCCTGCACAGCAATAATTTGCAGAACCCAAGTATTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGATGACCCTGCACAGCAATAATTTGCAGAACCCAAGTATTTTCT  443

seq1  ATTTTTCAACTGCCGACTTCTGGAGGTTTCCTTTCTTTCTTTCTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAACTGCCGACTTCTGGAGGTTTCCTTTCTTTCTTTCTTTCTTT  493

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTGAG  543

seq1  GTTTCCTTTCTTAATATGTAGCATATGCACTAAAAATGGGTTTTTGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTCTTAATATGTAGCATATGCACTAAAAATGGGTTTTTGCTGG  593

seq1  CTTTCCTTTCCAGAAAATCCAATCAATATAGCAATATAGATGTATCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTCCAGAAAATCCAATCAATATAGCAATATAGATGTATCTGAA  643

seq1  AGGTATGGTGAGGCTCCTGAGGTTTCCTCATAGTTTTTGTCTTTAGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGTGAGGCTCCTGAGGTTTCCTCATAGTTTTTGTCTTTAGATTT  693

seq1  TTATGATATTTTTTAATTTATGAGCCTAATTAGGATGGATATATATACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATATTTTTTAATTTATGAGCCTAATTAGGATGGATATATATACAT  743

seq1  ATATACACACAGACATACATACATTGTGTGTGTGTTTGTGTATGTATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACACAGACATACATACATTGTGTGTGTGTTTGTGTATGTATTTG  793

seq1  CGCATGTGCCCATGCCACTGTGCTTATGTGGAAATTGGGACAAGACCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGTGCCCATGCCACTGTGCTTATGTGGAAATTGGGACAAGACCAGC  843

seq1  TTGCAGTACATTCATTCCTTCTGCCATGTGGGTCCTAGGAGTTGAATTC  899
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTACATTCATTCCTTCTGCCATGTGGGTCCTAGGAGTTGAATTC  892