BAC Information

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BAC

Clone NameB6Ng01-049N06
Chromosome7 (Build37)
Map Location 111,352,469 - 111,454,744
singlet/doubletdoublet
Overlap geneOlfr650-ps1, Trim6, LOC667497, EG667823, Trim12
Upstream geneOlfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649
Downstream geneTrim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049N06.bB6Ng01-049N06.g
ACCDH873971DH873972
length378573
definitionDH873971|Mus musculus domesticus DNA, BAC clone: B6Ng01-049N06, 5' end.DH873972|Mus musculus domesticus DNA, BAC clone: B6Ng01-049N06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,352,469 - 111,352,852)(111,454,172 - 111,454,744)
sequence
acaagttcccttacgatgctaatgccaggagtctggggatcatactgtag
aagaagacaatatgcctcccttcctgcactgggcagtagcaccacattgc
cccctgggacataccagatgctttgagggcaacacagataaaggtggggt
tttggggaagggcaggaggaggtaggttagtgctgggattaaaggtgtga
gccaccacctgataaaagttaatttaaaatatgccaacaaggtagaaata
ctcatcttaaaaatctggaaaatgggagctggggaggaagctcggttggt
aaagggcttcctctgctaactaatgtaaggaatggggtttgatccctagg
catcatccgtattaaaaaacaaaacaaa
gaattcatatcacaatcccttaaaagaaaggtagaaatccttagctttct
atctttccagaaggtcttggcctttggatagaacttcagtcctactaagc
acacagcttgactctgctacaattcctttcttacaggagcagctgcaggt
agttctgcaaaggctgatggcagataagaaaaaatttgaaaactggaaag
atgaccttcagaaggatagaacttactgggaggcaagtagggacccttcc
taagggtgtcaacctgatgcccaagagggaccttggcaagaagctcctgg
ggtctttacttcctgggagtttatgaggccaataaaccttgatactcctc
cctactggttaccctggttggagatgcagagtcagtgtttcacacctgag
ctgggctctgtgaggagctggcaccacagaggatgcttggtcagaaggga
tactgggtcatttccatggtgccttctgaaactgagtctacagaagaaga
tacttgggaatgggtgggtaatggatatgtgatcagtgttaaacttctgc
caggggatttaaagcagaatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111352469_111352852
seq2: B6Ng01-049N06.b_44_427

seq1  GAATTCACAAGTTCCCTTACGATGCTAATGCCAGGAGTCTGGGGATCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGTTCCCTTACGATGCTAATGCCAGGAGTCTGGGGATCATA  50

seq1  CTGTAGAAGAAGACAATATGCCTCCCTTCCTGCACTGGGCAGTAGCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAAGAAGACAATATGCCTCCCTTCCTGCACTGGGCAGTAGCACCA  100

seq1  CATTGCCCCCTGGGACATACCAGATGCTTTGAGGGCAACACAGATAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCCCCTGGGACATACCAGATGCTTTGAGGGCAACACAGATAAAGG  150

seq1  TGGGGTTTTGGGGAAGGGCAGGAGGAGGTAGGTTAGTGCTGGGATTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTTGGGGAAGGGCAGGAGGAGGTAGGTTAGTGCTGGGATTAAAG  200

seq1  GTGTGAGCCACCACCTGATAAAAGTTAATTTAAAATATGCCAACAAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGCCACCACCTGATAAAAGTTAATTTAAAATATGCCAACAAGGTA  250

seq1  GAAATACTCATCTTAAAAATCTGGAAAATGGGAGCTGGGGAGGAAGCTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACTCATCTTAAAAATCTGGAAAATGGGAGCTGGGGAGGAAGCTCG  300

seq1  GTTGGTAAAGGGCTTCCTCTGCTAACTAATGTAAGGAATGGGGTTTGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAAAGGGCTTCCTCTGCTAACTAATGTAAGGAATGGGGTTTGATC  350

seq1  CCTAGCCATCATCCGCATTAAAAAACAAAACAAA  384
      ||||| ||||||||| ||||||||||||||||||
seq2  CCTAGGCATCATCCGTATTAAAAAACAAAACAAA  384

seq1: chr7_111454172_111454744
seq2: B6Ng01-049N06.g_67_639 (reverse)

seq1  TACATTCTGCTTTTAACTCCCTGGCAGAAGTTAAACACTGATCACATATC  50
      ||||||||||||| ||  |||||||||||||| |||||||||||||||||
seq2  TACATTCTGCTTTAAATCCCCTGGCAGAAGTTTAACACTGATCACATATC  50

seq1  CATTACCCACCCATTCCCAAGTATCTTCTTCTGTAGACTCAGTTTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCCACCCATTCCCAAGTATCTTCTTCTGTAGACTCAGTTTCAGAA  100

seq1  GGCACCATGGAAATGACCCAGTATCCCTTCTGACCAAGCATCCTCTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCATGGAAATGACCCAGTATCCCTTCTGACCAAGCATCCTCTGTGG  150

seq1  TGCCAGCTCCTCACAGAGCCCAGCTCAGGTGTGAAACACTGACTCTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCTCCTCACAGAGCCCAGCTCAGGTGTGAAACACTGACTCTGCAT  200

seq1  CTCCAACCAGGGTAACCAGTAGGGAGGAGTATCAAGGTTTATTGGCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACCAGGGTAACCAGTAGGGAGGAGTATCAAGGTTTATTGGCCTCA  250

seq1  TAAACTCCCAGGAAGTAAAGACCCCAGGAGCTTCTTGCCAAGGTCCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCCCAGGAAGTAAAGACCCCAGGAGCTTCTTGCCAAGGTCCCTCT  300

seq1  TGGGCATCAGGTTGACACCCTTAGGAAGGGTCCCTACTTGCCTCCCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATCAGGTTGACACCCTTAGGAAGGGTCCCTACTTGCCTCCCAGTA  350

seq1  AGTTCTATCCTTCTGAAGGTCATCTTTCCAGTTTTCAAATTTTTTCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATCCTTCTGAAGGTCATCTTTCCAGTTTTCAAATTTTTTCTTAT  400

seq1  CTGCCATCAGCCTTTGCAGAACTACCTGCAGCTGCTCCTGTAAGAAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATCAGCCTTTGCAGAACTACCTGCAGCTGCTCCTGTAAGAAAGGA  450

seq1  ATTGTAGCAGAGTCAAGCTGTGTGCTTAGTAGGACTGAAGTTCTATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGCAGAGTCAAGCTGTGTGCTTAGTAGGACTGAAGTTCTATCCAA  500

seq1  AGGCCAAGACCTTCTGGAAAGATAGAAAGCTAAGGATTTCTACCTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAGACCTTCTGGAAAGATAGAAAGCTAAGGATTTCTACCTTTCTT  550

seq1  TTAAGGGATTGTGATATGAATTC  573
      |||||||||||||||||||||||
seq2  TTAAGGGATTGTGATATGAATTC  573