BAC Information

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BAC

Clone NameB6Ng01-050H19
Chromosome7 (Build37)
Map Location 113,585,286 - 113,585,976
singlet/doubletsinglet
Overlap genenone
Upstream genePrkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380
Downstream geneEG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050H19.bB6Ng01-050H19.g
ACCDH874414DH874415
length8841,165
definitionDH874414|Mus musculus domesticus DNA, BAC clone: B6Ng01-050H19, 5' end.DH874415|Mus musculus domesticus DNA, BAC clone: B6Ng01-050H19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaaatagatgagattatcaggtaaactacaaccattaaaatt
ggggaaccttgtgaatttctgttgttcaataaattctgaccctgtgaaaa
gacaaaaatgtatttgttctgtttctggaatggtgtgctcatgatgagga
acttgcagccagaagcagtggatgccttccaaagaaagatttataagttg
tcaagtgttatattaagtcagtattcattagaggagcagaaacaatagag
tgaattaaagggcggttcatatgatataatctggctaatccagtaatggc
tatctcagatcagagaggctaagaacatggtaagtaggtcagtccataag
tgtcaataggcccaatatgttgctagaggcctggagacctgctagccttt
tcagtttatgttagaagccagaagaatcgggttctaatatcagcatagta
atgccacagtgacagcaacagaagaactaaacttccaacaggagtgaagg
caggcagctgaaagcaaatctttccttctcccacatcctcttcttctggg
ttgcctcagaagtttgttgtccatatcttgggtaggtctttctagttcaa
acatctctttaagatagtccctcaggaaagtacccagtctttcatgtgac
cgtacaggagaggctggagctgaggcaatggtaggcattggaccccacct
tggccagactgcttagttatgcatttcttccttctattgaaaacattctc
tctgctgggcatggtggttcatgcctttaattctagcactcagaggcaga
ggcagtgaatttctgagttcgaggccagcctggtctacaaagtgagttcc
aggacagccaggctatacagagaaaccctgtctc
gaattcatgaaaatcttaggcaaatggatgtatctggaggagatcatcct
gagtgaggtaaaccaatcacaaaaggacacacttaatatccaaaatatac
aaagaactcaagaatttagactccagagaaacaaataaccctagtaaaat
tggggttcagagctaaacaaagtgttttcaactgaggaatgtcaaatggc
tgagatacacttaaagaaacgttcaatatccttagtcatcaagaaaatgc
aaatcagaaagaccctaagattctacctcacaccagtcagaatggctcag
atcaaaaactcaggtgacagcagattctggtgaggatatggagaaagagg
aacactcctctatttttggagggagttactacaactactctggaaattag
tctggcagttctaaagaaaattgaacatagtactatctgaggatacatca
ataccactcctaggcatatacccagaagatgatccaacttgtaataacaa
cacatgttccaatagcagccttaattataaaagccagaagctggaaacag
atgtcccttaacagaggaatgggtacagatgatgttgtaagtttacacaa
tgggttactactcagctattaaaaataatgacttcatcaaagcaggaaag
tttgaaataccaaagacaaaagtcacagacttttagggaatgctaaagtg
tggattcttcagtgcttcttagaagggggaacaaagtactcatgggagaa
atacaaggacaaagtgtggaggagagaatgaagtaaaggtcatctggaga
ctgccctacctagggatcaagactcttacactattgtggatgcagggaag
tgcttgctgaaggaacctgatatggctgtctcctgagaggctctgcaaaa
cctgacaaatacagaagtgatgctgtgcacattggactgaatgtgggtcc
ctgatggaggagtgagaggactgaggagctgagtgttgcagcccagtggg
acagatgtcattcggcagaccttgagcatcaagctgacacacaaagtaac
atgaggaacaggcttgccaattgtgcagaggtgcttgtgctatggagaga
tacttggcccgagggtgatcccagtaaggaagtccgatgtaagcaagatg
tagacgttggcacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113585286_113585976
seq2: B6Ng01-050H19.b_45_735 (reverse)

seq1  CCAATGCCTACCATTGCCTCAGCTCCAGCCTCTCCTGTACGGTCACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCCTACCATTGCCTCAGCTCCAGCCTCTCCTGTACGGTCACATGA  50

seq1  AAGACTGGGTACTTTCCTGAGGGACTATCTTAAAGAGATGTTTGAACTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGGTACTTTCCTGAGGGACTATCTTAAAGAGATGTTTGAACTAG  100

seq1  AAAGACCTACCCAAGATATGGACAACAAACTTCTGAGGCAACCCAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCTACCCAAGATATGGACAACAAACTTCTGAGGCAACCCAGAAGA  150

seq1  AGAGGATGTGGGAGAAGGAAAGATTTGCTTTCAGCTGCCTGCCTTCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGTGGGAGAAGGAAAGATTTGCTTTCAGCTGCCTGCCTTCACTC  200

seq1  CTGTTGGAAGTTTAGTTCTTCTGTTGCTGTCACTGTGGCATTACTATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGAAGTTTAGTTCTTCTGTTGCTGTCACTGTGGCATTACTATGCT  250

seq1  GATATTAGAACCCGATTCTTCTGGCTTCTAACATAAACTGAAAAGGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGAACCCGATTCTTCTGGCTTCTAACATAAACTGAAAAGGCTAG  300

seq1  CAGGTCTCCAGGCCTCTAGCAACATATTGGGCCTATTGACACTTATGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTCCAGGCCTCTAGCAACATATTGGGCCTATTGACACTTATGGAC  350

seq1  TGACCTACTTACCATGTTCTTAGCCTCTCTGATCTGAGATAGCCATTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTACTTACCATGTTCTTAGCCTCTCTGATCTGAGATAGCCATTACT  400

seq1  GGATTAGCCAGATTATATCATATGAACCGCCCTTTAATTCACTCTATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGCCAGATTATATCATATGAACCGCCCTTTAATTCACTCTATTGT  450

seq1  TTCTGCTCCTCTAATGAATACTGACTTAATATAACACTTGACAACTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCCTCTAATGAATACTGACTTAATATAACACTTGACAACTTATA  500

seq1  AATCTTTCTTTGGAAGGCATCCACTGCTTCTGGCTGCAAGTTCCTCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCTTTGGAAGGCATCCACTGCTTCTGGCTGCAAGTTCCTCATCA  550

seq1  TGAGCACACCATTCCAGAAACAGAACAAATACATTTTTGTCTTTTCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACACCATTCCAGAAACAGAACAAATACATTTTTGTCTTTTCACAG  600

seq1  GGTCAGAATTTATTGAACAACAGAAATTCACAAGGTTCCCCAATTTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAATTTATTGAACAACAGAAATTCACAAGGTTCCCCAATTTTAAT  650

seq1  GGTTGTAGTTTACCTGATAATCTCATCTATTTTGTGAATTC  691
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTAGTTTACCTGATAATCTCATCTATTTTGTGAATTC  691