BAC Information

Click to search

BAC

Clone NameB6Ng01-050I22
Chromosome7 (Build37)
Map Location 94,443,453 - 94,604,365
singlet/doubletdoublet
Overlap geneNox4, Tyr
Upstream geneOlfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneGrm5, Ctsc, LOC100039756, Rab38
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050I22.bB6Ng01-050I22.g
ACCDH874464DH874465
length1,0711,075
definitionDH874464|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I22, 5' end.DH874465|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,603,288 - 94,604,365)(94,443,453 - 94,444,544)
sequence
gaattctcctttctgaagaaaattgctttttgatagtgtcattttctttc
cattgcttcaagaaagatggatttgtttctcctccattaagggattccaa
tgtgctaaatgcatgtttgattgttttcaagtttcattcatctctatcag
ttttaagctcagacctattatacagtaaatccacggggattttgttacaa
ttcttgactgcttatatctattctttcagtaccacaagagtgcctcagtg
ttttcagcacaaacagatagtggtgagttggacatttattgaaataactc
acatttttaaaagaagcaaggatattttaaagctagagggaattgatagt
aaataaaattattatatgtaaatgacataatacataagcagctagaacag
acttcagacaggaaaatcatgcctttaacctttatagaagttataagatg
gatttaaggagggctttgcaagtagctgtcatgttgattttatcttccaa
aattacctccaccaagcccctgagttttaggctgaatatttttccatagt
tcctttttccttaatgttacttaattaggtactttaagcttcataaattt
cacagctaaccacgtaaaggaaaactggcaaaaattgatagcaacttgtg
acatttatgagaatttcacagttcccttgggcccacgtctctgcctcttc
tccagatgatccctattgactttcttggtattctacccattgattcatta
tttattttcactaatctttacttatataaagattattctttagcacaata
aatagaaattatttccttcttattatttccttcccataataaaaattcaa
ggaagttaagaggtttctccttcagcaaatctttctgacattgtgcaata
gtgtctgggtttcgttgctgattatgggatggatcccgggtgggggtaat
ctctggatagtccatccttcatcttagctccaaactttgtcattatactc
ctttccatgggtatttggtccctattctaatgagggatgagattcaccca
tggtctccctcctgatgattt
gaattcccaagtcagtaacatattgtatgttttacaatgctgaaaatagt
ggaattgcaagtgatattagtgccaaaaattggaaagtattgatgctaag
taggaagtgatgttagtctggtttgagattttctacactgtttatagtaa
tgcttcacattttacctaatgaatgtgtagagtacttatttgtcatttta
aaataaaataaaatttaaaaagaagtgataatagaagagtgctgaaaaca
tgatatgagattacaaaagcaatggaagtcctagtaacattgggatattt
ccaatcctcagatcagggaaacactcaaggggaataaagttttaagatga
tgctgtagcgaaatcaaactacagggtaaagagcttgaagacaagtgtat
gagaatgagtaggctgggcagaaatggagaaaatatcagagagaggtaag
aacacaaatccagtttcttttcaaactcttctgagcttgtcagtgaatac
agatttctgtgcaacttgattgtggatgtatagaacacacttggatgaga
tctcaggcatcttccatctaggattgtataagaaattgaccctgaaatga
aaaagtatattaaggtgattatatcaccagcaaaatggagaaaaaataag
ttttaaggctagtgagagtagaaagaacttgtttgggagctttggtaaga
tcaaagaaactctacagcattcttgaaggaattggcatttaacatggtcc
ttaacaagcgaggtgacacatacaacttcagaccacaggctgcttttcct
ttgtacttgactctgtttgacccttgccttatttgttcagctaggattgt
gtttaagcagagcatctgcatctgtcctgaacctcactgcagcctcatcc
ttttacctatgtgccggacagtcctggcttatcttcgaggatcacagaag
tacagaaaagaaatctatcatgaattttcatggcaggatctagtgtatat
cacgtattgttgtccgttttatgagctggtttaataagaatatctctctc
agggggtaaggatacactactttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94603288_94604365
seq2: B6Ng01-050I22.b_45_1115 (reverse)

seq1  AAATCAAGAGGAGGGAAGACCAATGGGTGGATACTTCATTCCTCATTAGA  50
      ||||||  ||||||| ||||| ||||||| ||   |||| ||||||||||
seq2  AAATCATCAGGAGGG-AGACC-ATGGGTGAAT--CTCATCCCTCATTAGA  46

seq1  ATAGGGAACAAAATACCCAT-GAAAGGAGTTATAATGACAAAGTTTGGAG  99
      |||||| || |||||||||| |||||||| ||||||||||||||||||||
seq2  ATAGGG-ACCAAATACCCATGGAAAGGAG-TATAATGACAAAGTTTGGAG  94

seq1  CTAAGATGAAAGGATGGACTATCCAGAGATTACCCCACCCGGGGATCCAT  149
      |||||||| |||||||||||||||||||||||||||  || |||||||||
seq2  CTAAGATG-AAGGATGGACTATCCAGAGATTACCCCCACCCGGGATCCAT  143

seq1  CCCATAATCAGCAACGAAACCCAGACACTATTGCACAATGTCAGAAAGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCATAATCAGCAACGAAACCCAGACACTATTGCACAATGTCAGAAAGA-  192

seq1  TTTGCTGAAGGAGAAACCTCTTAACTTCCTTGAATTTTTATTATGGGAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAAGGAGAAACCTCTTAACTTCCTTGAATTTTTATTATGGGAAG  242

seq1  GAAATAATAAGAAGGAAATAATTTCTATTTATTGTGCTAAAGAATAATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATAAGAAGGAAATAATTTCTATTTATTGTGCTAAAGAATAATCT  292

seq1  TTATATAAGTAAAGATTAGTGAAAATAAATAATGAATCAATGGGTAGAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAGTAAAGATTAGTGAAAATAAATAATGAATCAATGGGTAGAAT  342

seq1  ACCAAGAAAGTCAATAGGGATCATCTGGAGAAGAGGCAGAGACGTGGGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAAGTCAATAGGGATCATCTGGAGAAGAGGCAGAGACGTGGGCC  392

seq1  CAAGGGAACTGTGAAATTCTCATAAATGTCACAAGTTGCTATCAATTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAACTGTGAAATTCTCATAAATGTCACAAGTTGCTATCAATTTTT  442

seq1  GCCAGTTTTCCTTTACGTGGTTAGCTGTGAAATTTATGAAGCTTAAAGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTTTCCTTTACGTGGTTAGCTGTGAAATTTATGAAGCTTAAAGTA  492

seq1  CCTAATTAAGTAACATTAAGGAAAAAGGAACTATGGAAAAATATTCAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTAAGTAACATTAAGGAAAAAGGAACTATGGAAAAATATTCAGCC  542

seq1  TAAAACTCAGGGGCTTGGTGGAGGTAATTTTGGAAGATAAAATCAACATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCAGGGGCTTGGTGGAGGTAATTTTGGAAGATAAAATCAACATG  592

seq1  ACAGCTACTTGCAAAGCCCTCCTTAAATCCATCTTATAACTTCTATAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACTTGCAAAGCCCTCCTTAAATCCATCTTATAACTTCTATAAAG  642

seq1  GTTAAAGGCATGATTTTCCTGTCTGAAGTCTGTTCTAGCTGCTTATGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGGCATGATTTTCCTGTCTGAAGTCTGTTCTAGCTGCTTATGTAT  692

seq1  TATGTCATTTACATATAATAATTTTATTTACTATCAATTCCCTCTAGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATTTACATATAATAATTTTATTTACTATCAATTCCCTCTAGCTT  742

seq1  TAAAATATCCTTGCTTCTTTTAAAAATGTGAGTTATTTCAATAAATGTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATCCTTGCTTCTTTTAAAAATGTGAGTTATTTCAATAAATGTCC  792

seq1  AACTCACCACTATCTGTTTGTGCTGAAAACACTGAGGCACTCTTGTGGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACCACTATCTGTTTGTGCTGAAAACACTGAGGCACTCTTGTGGTA  842

seq1  CTGAAAGAATAGATATAAGCAGTCAAGAATTGTAACAAAATCCCCGTGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAATAGATATAAGCAGTCAAGAATTGTAACAAAATCCCCGTGGA  892

seq1  TTTACTGTATAATAGGTCTGAGCTTAAAACTGATAGAGATGAATGAAACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTATAATAGGTCTGAGCTTAAAACTGATAGAGATGAATGAAACT  942

seq1  TGAAAACAATCAAACATGCATTTAGCACATTGGAATCCCTTAATGGAGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAATCAAACATGCATTTAGCACATTGGAATCCCTTAATGGAGGA  992

seq1  GAAACAAATCCATCTTTCTTGAAGCAATGGAAAGAAAATGACACTATCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAATCCATCTTTCTTGAAGCAATGGAAAGAAAATGACACTATCAA  1042

seq1  AAAGCAATTTTCTTCAGAAAGGAGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  AAAGCAATTTTCTTCAGAAAGGAGAATTC  1071

seq1: chr7_94443453_94444544
seq2: B6Ng01-050I22.g_66_1140

seq1  GAATTCCCAAGTCAGTAACATATTGTATGTTTTACAATGCTGAAAATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGTCAGTAACATATTGTATGTTTTACAATGCTGAAAATAGT  50

seq1  GGAATTGCAAGTGATATTAGTGCCAAAAATTGGAAAGTATTGATGCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGCAAGTGATATTAGTGCCAAAAATTGGAAAGTATTGATGCTAAG  100

seq1  TAGGAAGTGATGTTAGTCTGGTTTGAGATTTTCTACACTGTTTATAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTGATGTTAGTCTGGTTTGAGATTTTCTACACTGTTTATAGTAA  150

seq1  TGCTTCACATTTTACCTAATGAATGTGTAGAGTACTTATTTGTCATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACATTTTACCTAATGAATGTGTAGAGTACTTATTTGTCATTTTA  200

seq1  AAATAAAATAAAATTTAAAAAGAAGTGATAATAGAAGAGTGCTGAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATAAAATTTAAAAAGAAGTGATAATAGAAGAGTGCTGAAAACA  250

seq1  TGATATGAGATTACAAAAGCAATGGAAGTCCTAGTAACATTGGGATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGAGATTACAAAAGCAATGGAAGTCCTAGTAACATTGGGATATTT  300

seq1  CCAATCCTCAGATCAGGGAAACACTCAAGGGGAATAAAGTTTTAAGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCTCAGATCAGGGAAACACTCAAGGGGAATAAAGTTTTAAGATGA  350

seq1  TGCTGTAGCGAAATCAAACTACAGGGTAAAGAGCTTGAAGACAAGTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGCGAAATCAAACTACAGGGTAAAGAGCTTGAAGACAAGTGTAT  400

seq1  GAGAATGAGTAGGCTGGGCAGAAATGGAGAAAATATCAGAGAGAGGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGAGTAGGCTGGGCAGAAATGGAGAAAATATCAGAGAGAGGTAAG  450

seq1  AACACAAATCCAGTTTCTTTTCAAACTCTTCTGAGCTTGTCAGTGAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAATCCAGTTTCTTTTCAAACTCTTCTGAGCTTGTCAGTGAATAC  500

seq1  AGATTTCTGTGCAACTTGATTGTGGATGTATAGAACACACTTGGATGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTGTGCAACTTGATTGTGGATGTATAGAACACACTTGGATGAGA  550

seq1  TCTCAGGCATCTTCCATCTAGGATTGTATAAGAAATTGACCCTGAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCATCTTCCATCTAGGATTGTATAAGAAATTGACCCTGAAATGA  600

seq1  AAAAGTATATTAAGGTGATTATATCACCAGCAAAATGGAGAAAAAATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATATTAAGGTGATTATATCACCAGCAAAATGGAGAAAAAATAAG  650

seq1  TTTTAAGGCTAGTGAGAGTAGAAAGAACTTGTTTGGGAGCTTTGGTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGCTAGTGAGAGTAGAAAGAACTTGTTTGGGAGCTTTGGTAAGA  700

seq1  TCAAAGAAACTCTACAGCATTCTTGAAGGAATTGGCATTTAACATGGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAACTCTACAGCATTCTTGAAGGAATTGGCATTTAACATGGTCC  750

seq1  TTAACAAGCGAGGTGACACATACAACTTCAGACCACAGGCTGCTTTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGCGAGGTGACACATACAACTTCAGACCACAGGCTGCTTTTCCT  800

seq1  TTGTACTTGACTCTGTTTTGACCCTTGCCTTATTTGTTCAGCTAGGATTG  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGTACTTGACTCTG-TTTGACCCTTGCCTTATTTGTTCAGCTAGGATTG  849

seq1  TGTTTAAGCAGAGCATCTGCATCTGTCCTGAACCTCAACTGCAGCCTCAT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTTTAAGCAGAGCATCTGCATCTGTCCTGAACCTC-ACTGCAGCCTCAT  898

seq1  CCTTTTACCTATGTGCCGGACAGTCCTGGCTTATCTTCGAGGATCACAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTACCTATGTGCCGGACAGTCCTGGCTTATCTTCGAGGATCACAGA  948

seq1  AGGTACAGAAAAGAAAATCTTATTCATGAATTTCTATGGCAGGATCTAGT  1000
      | ||||||||||| ||||||   ||||||||||  |||||||||||||||
seq2  A-GTACAGAAAAG-AAATCT--ATCATGAATTTTCATGGCAGGATCTAGT  994

seq1  GTAATAATCACGTATTAGTTGTTCCGTTTTTATGAGCTGGTTTTATTTAG  1050
      |||   |||||||||| |||| |||| ||||||||||||| |||| | ||
seq2  GTA--TATCACGTATT-GTTG-TCCG-TTTTATGAGCTGG-TTTAATAAG  1038

seq1  AATATCTCTTCTCAGTGGTGGTAAGGGATACATTACCTTTAA  1092
      |||||||| |||||  || ||||| ||||||| || ||||||
seq2  AATATCTC-TCTCA--GGGGGTAA-GGATACACTA-CTTTAA  1075