BAC Information

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BAC

Clone NameB6Ng01-051H19
Chromosome7 (Build37)
Map Location 64,638,068 - 64,824,180
singlet/doubletdoublet
Overlap geneGabrg3, Gabra5
Upstream genep, LOC100040839
Downstream geneGabrb3, EG668807, LOC434189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051H19.bB6Ng01-051H19.g
ACCDH875115DH875116
length1,1441,126
definitionDH875115|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H19, 5' end.DH875116|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,638,068 - 64,639,212)(64,823,051 - 64,824,180)
sequence
gaattccaatgagagctgaacatctctgaccttctctctgttaagcacca
tatcccccactctacagagttgttcatgcctacaggggctctgatgagga
gaaacctcaagccatcagctggttttctcagagaatgaggctctctgtgt
cctagcacctggggctaagaacgaaaaagagtttccttctaccttgaagc
aatatttcattgcaggtgggagccttcgaagagcttaagaaacaaagctc
ctgtcctagtttgtctatgtgtgtgccttaatgtcacttctctaaaaaga
ggctgtgagggaacacactgagagggatttgtcctaactgggtccaggct
catttccattccgacttccagacaggagtcaaatgtcagttccacaccaa
gaggcttgtcctcaggcatgtcacttttctgaagttaacaaggaatcagt
gaaaagtctaatcattttaaagttcagtctttcatcttcactcagatctt
cagaggcatatataaacgtatctgcaccagtctctcgtgtgtgttaaaaa
gctatggccaataggagttacagtagtccagcagcctaaaaccaaatcca
tgcattgctgactcttctttactaaatattgttcacagaactcccaaaat
agttgaaaatctgaagatggtgaagtctactcataaaatgacgctctatt
tacacgtgacattcacaaacgcttctaatcattcccgtgtgagtagttct
acacgtctgctgcgtaaatggttattacaaggtattggttagggaataag
ggcaagaagaagcctgtacatgctcaaaaccttttttcctaatcaacagc
tacttggaactgtaaatatggacatgaaagaacaactatccatgtgtgtg
agagatcttgataatcttgtagcattgcttttgcgattaagcttctccta
gactgatcttaaactgaattctatttcatgaatacccggctggctagaaa
attaaattaagccattccacaaatttcagaaacagttgtggatttaccta
agcagaatattcaccacaaggaggatttaggatattaaataccccttcac
ccagtaagggagaatgcagttcactacctgttaaacgtacttgt
gaattcttttgattaacccctctttcctacctttcactctgatcttcatt
tgttttctttggaatgagtggtcagatctgacatgttgaaacaccagagt
ctggcctgtgactttagctccagttaaataatcttcacaattgatgttgt
tttccaaagtgttttgtttttgtttgtttgcttgtctgttttgactgttg
ttgtttaggtttgttctaactgtttattgtgaggcatgcgtactggagct
cttcctaggctccggtcaaaagtatttctttgggggaataatcttttcac
aaagaaagctccaggatgcaggcctatatcatcataggcaatttccccct
tttcctacttaaaccaccagggaatcttcagatcttccctttgaggacca
tgtggcacttccaaggggaaagtccagaaacacatgggccatcttccaag
actgaatgcctcaggattctctccccctcaagctagtcctcgggcaattc
tttcaagcatgagggaagtgttccaagagtttctagctcagatgcctggc
aaaaagaagaaatctgtgaagggaaagaggcctttctctctaggactctg
ttgacatctcctgcagctgagagtcaagaatctcatcaaaactacgacaa
tcaagatcctctgcagagacagccctcccttctcagcattgccataacct
gttcttgcttagggccagaagagtatttgacctgtcagaaaattcatgat
ataaaaaaagtaaataaacccactcgtgtttttacttcaatctttaagct
agacaatgatgaagtgttactcaatctaagcagcatcatgtcaaaggcta
gaaatcacaaagtgaccgttaaaatacttggccacctcattccacttctc
acacacttgtatctaaagcatgtatgtagtttatcctctgtcattgggta
ataacacatttctgctgcatcctgacttggcctcaattgtttactgcagc
agagttgagttattggcttccctaagtggagtcccgaactcatatttctg
gaggtacaaatcctgaagaggaaggctgtgggttcccctgttggcctgca
ctccccaaaaaaaagcttctgggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64638068_64639212
seq2: B6Ng01-051H19.b_43_1186

seq1  GAATTCCAATGAGAGCTGAACATCTCTGACCTTCTCTCTGTTAAGCACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGAGAGCTGAACATCTCTGACCTTCTCTCTGTTAAGCACCA  50

seq1  TATCCCCCACTCTACAGAGTTGTTCATGCCTACAGGGGCTCTGATGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCCACTCTACAGAGTTGTTCATGCCTACAGGGGCTCTGATGAGGA  100

seq1  GAAACCTCAAGCCATCAGCTGGTTTTCTCAGAGAATGAGGCTCTCTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTCAAGCCATCAGCTGGTTTTCTCAGAGAATGAGGCTCTCTGTGT  150

seq1  CCTAGCACCTGGGGCTAAGAACGAAAAAGAGTTTCCTTCTACCTTGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCACCTGGGGCTAAGAACGAAAAAGAGTTTCCTTCTACCTTGAAGC  200

seq1  AATATTTCATTGCAGGTGGGAGCCTTCGAAGAGCTTAAGAAACAAAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCATTGCAGGTGGGAGCCTTCGAAGAGCTTAAGAAACAAAGCTC  250

seq1  CTGTCCTAGTTTGTCTATGTGTGTGCCTTAATGTCACTTCTCTAAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTAGTTTGTCTATGTGTGTGCCTTAATGTCACTTCTCTAAAAAGA  300

seq1  GGCTGTGAGGGAACACACTGAGAGGGATTTGTCCTAACTGGGTCCAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAGGGAACACACTGAGAGGGATTTGTCCTAACTGGGTCCAGGCT  350

seq1  CATTTCCATTCCGACTTCCAGACAGGAGTCAAATGTCAGTTCCACACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCATTCCGACTTCCAGACAGGAGTCAAATGTCAGTTCCACACCAA  400

seq1  GAGGCTTGTCCTCAGGCATGTCACTTTTCTGAAGTTAACAAGGAATCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTGTCCTCAGGCATGTCACTTTTCTGAAGTTAACAAGGAATCAGT  450

seq1  GAAAAGTCTAATCATTTTAAAGTTCAGTCTTTCATCTTCACTCAGATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCTAATCATTTTAAAGTTCAGTCTTTCATCTTCACTCAGATCTT  500

seq1  CAGAGGCATATATAAACGTATCTGCACCAGTCTCTCGTGTGTGTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCATATATAAACGTATCTGCACCAGTCTCTCGTGTGTGTTAAAAA  550

seq1  GCTATGGCCAATAGGAGTTACAGTAGTCCAGCAGCCTAAAACCAAATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGCCAATAGGAGTTACAGTAGTCCAGCAGCCTAAAACCAAATCCA  600

seq1  TGCATTGCTGACTCTTCTTTACTAAATATTGTTCACAGAACTCCCAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCTGACTCTTCTTTACTAAATATTGTTCACAGAACTCCCAAAAT  650

seq1  AGTTGAAAATCTGAAGATGGTGAAGTCTACTCATAAAATGACGCTCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAAATCTGAAGATGGTGAAGTCTACTCATAAAATGACGCTCTATT  700

seq1  TACACGTGACATTCACAAACGCTTCTAATCATTCCCGTGTGAGTAGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTGACATTCACAAACGCTTCTAATCATTCCCGTGTGAGTAGTTCT  750

seq1  ACACGTCTGCTGCGTAAATGGTTATTACAAGGTATTGGTTAGGGAATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTCTGCTGCGTAAATGGTTATTACAAGGTATTGGTTAGGGAATAAG  800

seq1  GGCAAGAAGAAGCCTGTACATGCTCAAAACCTTTTTTCCTAATCAACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAGAAGCCTGTACATGCTCAAAACCTTTTTTCCTAATCAACAGC  850

seq1  TACTTGGAACTGTAAATATGGACATGAAAGAACAACTATCCATGTGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGAACTGTAAATATGGACATGAAAGAACAACTATCCATGTGTGTG  900

seq1  AGAGATCTTGATAATCTTGTAGCATTGCTTTTGCGATTAAGCTTCTCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTTGATAATCTTGTAGCATTGCTTTTGCGATTAAGCTTCTCCTA  950

seq1  GACTGATCTTAAACTGAATTCTATTTCATGAATACCCGGCTGGCTAGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATCTTAAACTGAATTCTATTTCATGAATACCCGGCTGGCTAGAAA  1000

seq1  ATTAAATTAAGCCA-TCCACAAATTCCAG-AACAGTTGTGGATTTTACCT  1048
      |||||||||||||| |||||||||| ||| |||||||||||| |||||||
seq2  ATTAAATTAAGCCATTCCACAAATTTCAGAAACAGTTGTGGA-TTTACCT  1049

seq1  AAGCAGAATATTCACCACAAAGAGGAATTTAGGATATTTAATACCCCTTT  1098
      |||||||||||||||||||| |||| |||||||||||| |||||||| ||
seq2  AAGCAGAATATTCACCACAAGGAGG-ATTTAGGATATTAAATACCCC-TT  1097

seq1  CACCCAGTAA-GGAGAATGCAGTTCACTACCTGTAAAACCGTACTTGT  1145
      |||||||||| ||||||||||||||||||||||| ||| |||||||||
seq2  CACCCAGTAAGGGAGAATGCAGTTCACTACCTGTTAAA-CGTACTTGT  1144

seq1: chr7_64823051_64824180
seq2: B6Ng01-051H19.g_69_1194 (reverse)

seq1  GGGCCCAG-AGCTTTTCTGGGGGGAGTGCAGG-CAACAGGGG-ACCCACA  47
      |||||||| ||||||| |  |||||||||||| ||||||||| |||||||
seq2  GGGCCCAGAAGCTTTTTTTTGGGGAGTGCAGGCCAACAGGGGAACCCACA  50

seq1  GCCTACCTCTTCAGGAATATGTACCTTCAGAAATATGAAGTTCGGGGACC  97
      |||| |||||||||| || ||||||| |||||||||| ||||||||   |
seq2  GCCTTCCTCTTCAGG-ATTTGTACCTCCAGAAATATG-AGTTCGGG--AC  96

seq1  TCCACCTGAGGGAAGCCAATAACTCAACTCTGCTGCAGTAAACAATTTGA  147
      |||| || ||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCA-CTTAGGGAAGCCAATAACTCAACTCTGCTGCAGTAAACAA-TTGA  144

seq1  GGCCAAGTCAGGATGCAGCAGAATTGTGTTATTACCCAATGACAGAGGAT  197
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGCCAAGTCAGGATGCAGCAGAAATGTGTTATTACCCAATGACAGAGGAT  194

seq1  AATACTACATACATGCTTTAGATACAAGTGTGTGGAGAAGTGGAATGAGG  247
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AA-ACTACATACATGCTTTAGATACAAGTGTGT-GAGAAGTGGAATGAGG  242

seq1  TGGCCAAGTATTTTAACGGTCACTTTGTGATTTCTAGCCTTTGACATGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAGTATTTTAACGGTCACTTTGTGATTTCTAGCCTTTGACATGAT  292

seq1  GCTGCTTAGATTGAGTAACACTTCATCATTGTCTAGCTT-AAGATTGAAG  346
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTGCTTAGATTGAGTAACACTTCATCATTGTCTAGCTTAAAGATTGAAG  342

seq1  TAAAAACACGAGTGGGTTTATTTACTTTTTTTATATCATGAATTTTCTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACACGAGTGGGTTTATTTACTTTTTTTATATCATGAATTTTCTGA  392

seq1  CAGGTCAAATACTCTTCTGGCCCTAAGCAAGAACAGGTTATGGCAATGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAAATACTCTTCTGGCCCTAAGCAAGAACAGGTTATGGCAATGCT  442

seq1  GAGAAGGGAGGGCTGTCTCTGCAGAGGATCTTGATTGTCGTAGTTTTGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGAGGGCTGTCTCTGCAGAGGATCTTGATTGTCGTAGTTTTGAT  492

seq1  GAGATTCTTGACTCTCAGCTGCAGGAGATGTCAACAGAGTCCTAGAGAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTTGACTCTCAGCTGCAGGAGATGTCAACAGAGTCCTAGAGAGA  542

seq1  AAGGCCTCTTTCCCTTCACAGATTTCTTCTTTTTGCCAGGCATCTGAGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTCTTTCCCTTCACAGATTTCTTCTTTTTGCCAGGCATCTGAGCT  592

seq1  AGAAACTCTTGGAACACTTCCCTCATGCTTGAAAGAATTGCCCGAGGACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTCTTGGAACACTTCCCTCATGCTTGAAAGAATTGCCCGAGGACT  642

seq1  AGCTTGAGGGGGAGAGAATCCTGAGGCATTCAGTCTTGGAAGATGGCCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGGGGGAGAGAATCCTGAGGCATTCAGTCTTGGAAGATGGCCCA  692

seq1  TGTGTTTCTGGACTTTCCCCTTGGAAGTGCCACATGGTCCTCAAAGGGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTGGACTTTCCCCTTGGAAGTGCCACATGGTCCTCAAAGGGAA  742

seq1  GATCTGAAGATTCCCTGGTGGTTTAAGTAGGAAAAGGGGGAAATTGCCTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAAGATTCCCTGGTGGTTTAAGTAGGAAAAGGGGGAAATTGCCTA  792

seq1  TGATGATATAGGCCTGCATCCTGGAGCTTTCTTTGTGAAAAGATTATTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATATAGGCCTGCATCCTGGAGCTTTCTTTGTGAAAAGATTATTCC  842

seq1  CCCAAAGAAATACTTTTGACCGGAGCCTAGGAAGAGCTCCAGTACGCATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGAAATACTTTTGACCGGAGCCTAGGAAGAGCTCCAGTACGCATG  892

seq1  CCTCACAATAAACAGTTAGAACAAACCTAAACAACAACAGTCAAAACAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAATAAACAGTTAGAACAAACCTAAACAACAACAGTCAAAACAGA  942

seq1  CAAGCAAACAAACAAAAACAAAACACTTTGGAAAACAACATCAATTGTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAACAAACAAAAACAAAACACTTTGGAAAACAACATCAATTGTGA  992

seq1  AGATTATTTAACTGGAGCTAAAGTCACAGGCCAGACTCTGGTGTTTCAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTTAACTGGAGCTAAAGTCACAGGCCAGACTCTGGTGTTTCAAC  1042

seq1  ATGTCAGATCTGACCACTCATTCCAAAGAAAACAAATGAAGATCAGAGTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGATCTGACCACTCATTCCAAAGAAAACAAATGAAGATCAGAGTG  1092

seq1  AAAGGTAGGAAAGAGGGGTTAATCAAAAGAATTC  1130
      ||||||||||||||||||||||||||||||||||
seq2  AAAGGTAGGAAAGAGGGGTTAATCAAAAGAATTC  1126