BAC Information

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BAC

Clone NameB6Ng01-051I15
Chromosome7 (Build37)
Map Location 113,531,121 - 113,693,309
singlet/doubletdoublet
Overlap geneLOC634394, EG209380, EG668139
Upstream gene4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128
Downstream geneGm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I15.bB6Ng01-051I15.g
ACCDH875147DH875148
length1,025982
definitionDH875147|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I15, 5' end.DH875148|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,531,121 - 113,531,751)(113,692,791 - 113,693,309)
sequence
gaattctttgtttagctctgtaccccattttttattagggttatttgatt
ttctggtgtctatcttcttgagttctttatatatattggatattagtccc
cctatctgatttaggattggtaaaaatcctttcccaatcttttggtggcc
ttttgtcttattgacagtgtcttctgccttacagaagctatgcaatttta
tgagatctgatttatcaattctcaatcttacagcataagccattggtttt
ctgttcaggaatttttgtcccctgtgcccatatcttcgaggcttttcccc
acgttctccgctataaatttcagtgtctctggttttatgtggagttcctc
aatccacttagacttgatcttagtacaaagagataagattggatcaattc
ttattcttctacatgataactgccagttgtgctggcaccatttgttgaaa
atgctgtcttttccactggatcgtttttacttccttgtcaaagatcaagt
gaccataggaatgtgggttcatttctgggtcttcaattctattccattga
tctacatgtctgtctctgtaccagtaccatgcagtttttatcagtattgc
tgtggagtagagcttaaggtaagggataagagtcttttattggtgagaat
agttttcgatattctgggtttttttgttgatagaaatgaatttgcaaatt
gctttttctatctctttgaagaattgagttggaattttgatgggaattgc
attgaatctgtagattgcttttggtaatgtggccattttaaatatattaa
ttctgctgattcatgagcatgggagatctttccatcttctgaggtgttct
tcaatttctttcttcagagacttgaagttcttgtttttagatctttattt
ttaacttttaatttaaatttgaagttagtgggtaaaaataataggggtca
tatgaccatgacataacaataaatcatggaattttatactatcccattct
ccttctcctggtaatctgctctctc
gaattctgcctgttgtgaattctaatgtaggcttctaagatgatagtttc
tatgtcaatgacatagcattcagatggatggagttctttctttagggtct
aggatctctaaagcagaagctgacagagggacctctttaattttgaatca
taaaagttgggcaggttgggagggacctagagaggatcatgaatatcttg
gggtccaaatacaaacttaacttattagttctaaaaaagagagaaagtat
catttggtctggaagcaggggaaatatgtcctgctctatagtttcacagc
tttgatgtatgttggatgaagagagaggtgaagtaaatctatggtaagtt
catgctgaaggaagctgatctttacaagggatatgatagttaatcttagt
tgtctacttgactagatctggtatcacctaaaatataagctatggagcac
acatgttggactctgtggtcagattatttgaagattgaaggcccacccaa
aacatggtcaccacaacatgataaaagaaagacagagggtttctgtctgt
gcccgaagctgatcctctgtctcagggctccatactcaactagcaacagg
tgagagagaactagtctcccaggagtgcagacaagcctgtgagtgcaagt
agaactaccactgctactcagatggaccctcccggaaccctcgggacaca
ggacctaaggagcagcttgggatagaagccttctgttttccatctgcacc
cagagctaatactgtaccacacctctttatacccaaattcctctcagaga
gaactggtctcccaggagtactaacacagaggcttgcacacaaatacctt
caagagagagctgctctcccaggacagctgaaatacctgcaagctcagga
aataccaccacttctgttaaaatttgtgacccaagagggaccttcccaga
gccatatgacacaggaatcagtaacatctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113531121_113531751
seq2: B6Ng01-051I15.b_441_1067

seq1  TCTTATTCTTCTACATGATAACTGCCAGTTGTGCTGGCACCATTTGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCTTCTACATGATAACTGCCAGTTGTGCTGGCACCATTTGTTGA  50

seq1  AAATGCTGTCTTTTCCACTGGATCGTTTTTACTTCCTTGTCAAAGATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGTCTTTTCCACTGGATCGTTTTTACTTCCTTGTCAAAGATCAA  100

seq1  GTGACCATAGGAATGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCATAGGAATGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATT  150

seq1  GATCTACATGTCTGTCTCTGTACCAGTACCATGCAGTTTTTATCAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACATGTCTGTCTCTGTACCAGTACCATGCAGTTTTTATCAGTATT  200

seq1  GCTGTGGAGTAGAGCTTAAGGTAAGGGATAAGAGTCTTTTATTGGTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGAGTAGAGCTTAAGGTAAGGGATAAGAGTCTTTTATTGGTGAGA  250

seq1  ATAGTTTTCGATATTCTGGGTTTTTTTGTTGATAGAAATGAATTTGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTCGATATTCTGGGTTTTTTTGTTGATAGAAATGAATTTGCAAA  300

seq1  TTGCTTTTTCTATCTCTTTGAAGAATTGAGTTGGAATTTTGATGGGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTCTATCTCTTTGAAGAATTGAGTTGGAATTTTGATGGGAATT  350

seq1  GCATTGAATCTGTAGATTGCTTTTGGTAATGTGGCCATTTTAAATATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAATCTGTAGATTGCTTTTGGTAATGTGGCCATTTTAAATATATT  400

seq1  AATTCTGCTGATTCATGAGCATGGGAGATCTTTCCATCTTCTGAGGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCTGATTCATGAGCATGGGAGATCTTTCCATCTTCTGAGGTGTT  450

seq1  CTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTTGTTTTTTAGATCTTTA  500
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTCAATTTCTTTCTTCAGAGACTTGAAGTTCTTG-TTTTTAGATCTTTA  499

seq1  TTTTTAACTTTTAATTTAAATTTGAAGTTAGTGTAT-AAAATAATAGGTG  549
      |||||||||||||||||||||||||||||||||  | ||||||||||| |
seq2  TTTTTAACTTTTAATTTAAATTTGAAGTTAGTGGGTAAAAATAATAGGGG  549

seq1  TCATTATGACATTGACATACACATAAATCATTGAATTTTATACATATTCA  599
      ||| ||||||  |||||||   ||||||||| ||||||||||| || || 
seq2  TCA-TATGACCATGACATAACAATAAATCATGGAATTTTATAC-TA-TCC  596

seq1  CATTTCTCCTTCTCTTGTTATTCTGCTCTCTC  631
      || ||||||||||| || || |||||||||||
seq2  CA-TTCTCCTTCTCCTGGTAATCTGCTCTCTC  627

seq1: chr7_113692791_113693309
seq2: B6Ng01-051I15.g_65_583 (reverse)

seq1  ATGTTGTGGTGACCATGTTTTGGGTGGGCCTTCAATCTTCAAATAATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGTGACCATGTTTTGGGTGGGCCTTCAATCTTCAAATAATCTG  50

seq1  ACCACAGAGTCCAACATGTGTGCTCCATAGCTTATATTTTAGGTGATACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAGTCCAACATGTGTGCTCCATAGCTTATATTTTAGGTGATACC  100

seq1  AGATCTAGTCAAGTAGACAACTAAGATTAACTATCATATCCCTTGTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAGTCAAGTAGACAACTAAGATTAACTATCATATCCCTTGTAAAG  150

seq1  ATCAGCTTCCTTCAGCATGAACTTACCATAGATTTACTTCACCTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTCCTTCAGCATGAACTTACCATAGATTTACTTCACCTCTCTCT  200

seq1  TCATCCAACATACATCAAAGCTGTGAAACTATAGAGCAGGACATATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAACATACATCAAAGCTGTGAAACTATAGAGCAGGACATATTTCC  250

seq1  CCTGCTTCCAGACCAAATGATACTTTCTCTCTTTTTTAGAACTAATAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTCCAGACCAAATGATACTTTCTCTCTTTTTTAGAACTAATAAGT  300

seq1  TAAGTTTGTATTTGGACCCCAAGATATTCATGATCCTCTCTAGGTCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGTATTTGGACCCCAAGATATTCATGATCCTCTCTAGGTCCCTC  350

seq1  CCAACCTGCCCAACTTTTATGATTCAAAATTAAAGAGGTCCCTCTGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTGCCCAACTTTTATGATTCAAAATTAAAGAGGTCCCTCTGTCAG  400

seq1  CTTCTGCTTTAGAGATCCTAGACCCTAAAGAAAGAACTCCATCCATCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTTTAGAGATCCTAGACCCTAAAGAAAGAACTCCATCCATCTGA  450

seq1  ATGCTATGTCATTGACATAGAAACTATCATCTTAGAAGCCTACATTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGTCATTGACATAGAAACTATCATCTTAGAAGCCTACATTAGAA  500

seq1  TTCACAACAGGCAGAATTC  519
      |||||||||||||||||||
seq2  TTCACAACAGGCAGAATTC  519