BAC Information

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BAC

Clone NameB6Ng01-052A03
Chromosome7 (Build37)
Map Location 4,466,364 - 4,466,776
singlet/doubletsinglet
Overlap geneTnnt1
Upstream geneLOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c
Downstream geneTnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052A03.bB6Ng01-052A03.g
ACCDH875490DH875491
length1,180407
definitionDH875490|Mus musculus domesticus DNA, BAC clone: B6Ng01-052A03, 5' end.DH875491|Mus musculus domesticus DNA, BAC clone: B6Ng01-052A03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagtagcacctgaaaaaaat
gttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagctggtataaccactggaaatcagactggcggttcctcag
aaaattgcatatagtactactggaggatccttcaatacctctcctgggca
tatatccagaagatgttccaactggtaataaggacacatgctccactatg
ttcatagcagccttatttatattagccagaagctcaaaagaactcagatg
tccctcaacagaggaatggatatagaaaatgtggtacatttacacaatgg
agtcctactcagcaattaaaaacaatgaatttatgaaattcctaggcaaa
tggatggatctggagggtatcaacctgagtgaggtaacccaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgctaaacatatgaaactcaag
aagaacgaagaccaaagtgtggacacttcaccccttcttagaattaggaa
caaaacacccatggaaggaattacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatatccagggatccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagcgtttgctgaaa
ggaccctgatatagctgtctcttgtgagactaggccggggcctagcaaac
acataagtgaatgctcacagtcagctattggatggatcacagggcctcca
atgaggagctagagaagtaccaaggagctaagatatctgcaacctgtagg
tgcaacaacattatgaacttaccagtaccctggagcttcttgacctctta
gctgcatatgtatcaaagatggcctagtaagtccatcacctgggaaagag
agcccaatgtcgtaaactttatgcctagatcagggacgccatgccaaagt
gggactgaatgggtaggggattgggggggt
aaggttatccttggctacatagtgagtctaaggctagtttgggttatatg
agaccgtgtctcaacaccaccctccaaccctcttccaatcctgagggtct
gagactgttagtgcccagaattcatgtgctggtatgaactgggcacccaa
ccgagagatgcgaagatttcttggtctcacacaacaggggcataggactg
gatctcagaatctgtgggtagtgagctttgaagatctcaacctgggggct
ttcaggcctagaacagcagagtttggatgagggggtcactgactttaggg
tctcaggacgaagctgctcttgatacagccatccctttgtggaatgtagg
gggaaggggaaagcgggacaggatgggaggaatcagggctgtggtaggag
gggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4466364_4466776
seq2: B6Ng01-052A03.g_67_479 (reverse)

seq1  TGCTCCCCTCCTACCACAGCCCTGATTCCTCCCATCCTGTCCCGCTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCTCCTACCACAGCCCTGATTCCTCCCATCCTGTCCCGCTTTCC  50

seq1  CCTTCCCCCTACATTCCACAAAGGGATGGCTGTATCAAGAGCAGCTTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCTACATTCCACAAAGGGATGGCTGTATCAAGAGCAGCTTCGT  100

seq1  CCTGAGACCCTAAAGTCAGTGACCCCCTCATCCAAACTCTGCTGTTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGACCCTAAAGTCAGTGACCCCCTCATCCAAACTCTGCTGTTCTAG  150

seq1  GCCTGAAAGCCCCCAGGTTGAGATCTTCAAAGCTCACTACCCACAGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAAGCCCCCAGGTTGAGATCTTCAAAGCTCACTACCCACAGATTC  200

seq1  TGAGATCCAGTCCTATGCCCCTGTTGTGTGAGACCAAGAAATCTTCGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCAGTCCTATGCCCCTGTTGTGTGAGACCAAGAAATCTTCGCAT  250

seq1  CTCTCGGTTGGGTGCCCAGTTCATACCAGCACATGAATTCTGGGCACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGTTGGGTGCCCAGTTCATACCAGCACATGAATTCTGGGCACTAA  300

seq1  CAGTCTCAGACCCTCAGGATTGGAAGAGGGTTGGAGGGTGGTGTTGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCAGACCCTCAGGATTGGAAGAGGGTTGGAGGGTGGTGTTGAGAC  350

seq1  ACGGTCTCATATAACCCAAACTAGCCTTAGACTCACTATGTAGCCAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCTCATATAACCCAAACTAGCCTTAGACTCACTATGTAGCCAAGGA  400

seq1  TAACCTTGAATTC  413
      |||||||||||||
seq2  TAACCTTGAATTC  413