BAC Information

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BAC

Clone NameB6Ng01-052L24
Chromosome7 (Build37)
Map Location 106,274,957 - 106,428,547
singlet/doubletdoublet
Overlap geneUvrag, Dgat2, Mogat2, Mtap6
Upstream geneCapn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, EG666529
Downstream geneSerpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052L24.bB6Ng01-052L24.g
ACCDH876011DH876012
length840784
definitionDH876011|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L24, 5' end.DH876012|Mus musculus domesticus DNA, BAC clone: B6Ng01-052L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,274,957 - 106,275,795)(106,427,774 - 106,428,547)
sequence
gaattcactctacagcccaggctcaagctcttgatcctcttgcctcagat
gccccttcaaggtctacagatttgttccccagagtgatgcttttaaaagg
cagcgggacaccccccctccagggcctccccttcctcttctgagtctcca
ggtgtgcggctcttccctacaggaagtgctccctgccatgatctgcagca
tcaccatggaccaaaagccacctgaccacacactaagctctcggaatatt
tcgctcctctttcaaagctgattatcttaagtatgttacagtaacgtgaa
gctaactgacgcagagtaaagtatggctcctatcagagaaaaactgcaac
gaactttaaatatacacaccggtggttaagttatggatcctatagtgaaa
aatactgcacagccatgaagaataaataatgtagtgtcgatgaaacaagt
caagaaactactagtcttcaatagtttgtatggtgcctgtgttgtcattt
gcacttcacagagagaaaagaatgcaatgctgtgatggctggagaggttt
aagtataaatacttgccccaggaggggggggtggggactgcacacgatat
ctttacgcattacacaaaatcttatacacattttacatgagaaaagcata
ggaatatattccctacttttaaataaaaaaataaatttacattaaaaaaa
aagacaaaaagtccatcggtagtggcgcccacctttgatcccagcactgg
cgaggctaagcaagtggctctctgtgagttctaagccagactagtataca
gataagagttccagggaagccaggcttaaacagagaaacc
gaattcatgtgttttccctcatgacagcagtcccctgcaaacgggatcct
gctcttgtcaccgggaacagagagacccggtgccccagcctttcatgctt
ttaagatgctgcagtgaacttggaataaaactattaatctccctgcatta
ttattagggaattaagaccacgtaaatccaacctaattccccgcttttac
agcataagcctctttcacaacagactaaaagccccgcaggataggaagga
tttagaaagaagatggaagaggctcagggggaaaaccgagtgaaattgac
attagctaagtgtggggctcaggatgatgggattgggccagagcacctgg
atgtcaatgtgcaaacagggctgagaacccccagggaaagcgtcaggtgt
gaaagcaggaaggctagacacacaagctaggcctgctcctagaaagctcg
gacctggagccgaagtgctgggcctcaccctggagggacagggcccacag
acagcttaggacaaggagggagataccctttacccaactccaacacacaa
acaaggttgatggagggtggttatacgtggttaggagaggggggaccagc
agaggtttaggaagacaggcagcagctcttttctagaacagtgtgctgaa
actagagagccgggggacaccagggacatgcttgaggctgcacaagtcag
acaggggccatggcgcgggattgaggggatgtgaattttctgggccctgt
caaaaccactgaccgaactgtgaaggtctcaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106274957_106275795
seq2: B6Ng01-052L24.b_43_882

seq1  GAATTCACTCTACAGCCCAGGCTCAAGCTCTTGATCCTCTTGCCTCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTACAGCCCAGGCTCAAGCTCTTGATCCTCTTGCCTCAGAT  50

seq1  GCCCCTTCAAGGTCTACAGATTTGTTCCCCAGAGTGATGCTTTTAAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTCAAGGTCTACAGATTTGTTCCCCAGAGTGATGCTTTTAAAAGG  100

seq1  CAGCGGGACACCCCCCCTCCAGGGCCTCCCCTTCCTCTTCTGAGTCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGGACACCCCCCCTCCAGGGCCTCCCCTTCCTCTTCTGAGTCTCCA  150

seq1  GGTGTGCGGCTCTTCCCTACAGGAAGTGCTCCCTGCCATGATCTGCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCGGCTCTTCCCTACAGGAAGTGCTCCCTGCCATGATCTGCAGCA  200

seq1  TCACCATGGACCAAAAGCCACCTGACCACACACTAAGCTCTCGGAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGGACCAAAAGCCACCTGACCACACACTAAGCTCTCGGAATATT  250

seq1  TCGCTCCTCTTTCAAAGCTGATTATCTTAAGTATGTTACAGTAACGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCCTCTTTCAAAGCTGATTATCTTAAGTATGTTACAGTAACGTGAA  300

seq1  GCTAACTGACGCAGAGTAAAGTATGGCTCCTATCAGAGAAAAACTGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTGACGCAGAGTAAAGTATGGCTCCTATCAGAGAAAAACTGCAAC  350

seq1  GAACTTTAAATATACACACCGGTGGTTAAGTTATGGATCCTATAGTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTAAATATACACACCGGTGGTTAAGTTATGGATCCTATAGTGAAA  400

seq1  AATACTGCACAGCCATGAAGAATAAATAATGTAGTGTCGATGAAACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGCACAGCCATGAAGAATAAATAATGTAGTGTCGATGAAACAAGT  450

seq1  CAAGAAACTACTAGTCTTCAATAGTTTGTATGGTGCCTGTGTTGTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACTACTAGTCTTCAATAGTTTGTATGGTGCCTGTGTTGTCATTT  500

seq1  GCACTTCACAGAGAGAAAAGAATGCAATGCTGTGATGGCTGGAGAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCACAGAGAGAAAAGAATGCAATGCTGTGATGGCTGGAGAGGTTT  550

seq1  AAGTATAAATACTTGCCCCAGGAGGGGGGGGTGGGGACTGCACACGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAATACTTGCCCCAGGAGGGGGGGGTGGGGACTGCACACGATAT  600

seq1  CTTTACGCATTACACAAAATCTTATACACATTTTACATGAG-AAAGCATA  649
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTTTACGCATTACACAAAATCTTATACACATTTTACATGAGAAAAGCATA  650

seq1  GGAATATATTCCCTACTTTTAAATAAAAAAATAAATTTACATTAAAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATATTCCCTACTTTTAAATAAAAAAATAAATTTACATTAAAAAAA  700

seq1  AAGACAAAAAGTCCATCGGTAGTGGCGCCCACCTTTGATCCCAGCACTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAAAGTCCATCGGTAGTGGCGCCCACCTTTGATCCCAGCACTGG  750

seq1  CGAGGCTAAGGCAAGTGGCTCTCTGTGAGTTCTAAGCCAGACTAGTATAC  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCTAA-GCAAGTGGCTCTCTGTGAGTTCTAAGCCAGACTAGTATAC  799

seq1  AGATAAGAGTTCCAGGGAAGCCAGGC-TAAACAGAGAAACC  839
      |||||||||||||||||||||||||| ||||||||||||||
seq2  AGATAAGAGTTCCAGGGAAGCCAGGCTTAAACAGAGAAACC  840

seq1: chr7_106427774_106428547
seq2: B6Ng01-052L24.g_70_853 (reverse)

seq1  GACTGAGACC-TCATAG-TCGGTCAGTGG-TTTGACA-GGCCCAG-AAAT  45
      | |||||||| ||| || ||||||||||| ||||||| ||||||| ||||
seq2  GCCTGAGACCTTCACAGTTCGGTCAGTGGTTTTGACAGGGCCCAGAAAAT  50

seq1  TCACATCCCCTC-ATTCCGCGCCATGG-CCCTGTCTGACTTGTGCAGCCT  93
      |||||||||||| || ||||||||||| ||||||||||||||||||||||
seq2  TCACATCCCCTCAATCCCGCGCCATGGCCCCTGTCTGACTTGTGCAGCCT  100

seq1  C-AGCATGTCCCTGGTGTCCCCCGGCTCTCTAG-TTCAGCACACTGTTCT  141
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAAGCATGTCCCTGGTGTCCCCCGGCTCTCTAGTTTCAGCACACTGTTCT  150

seq1  AG-AAAGAGCTGCTGCCTGTCTTCCTAAACCTCTGCTGGTCCCCCCTCTC  190
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGCTGCTGCCTGTCTTCCTAAACCTCTGCTGGTCCCCCCTCTC  200

seq1  CTAACCACGTATAACCACCCTCCATCAACCTTGTTTGTGTGTTGGAGTTG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCACGTATAACCACCCTCCATCAACCTTGTTTGTGTGTTGGAGTTG  250

seq1  GGTAAAGGGTATCTCCCTCCTTGTCCTAAGCTGTCTGTGGGCCCTGTCCC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGGGTATCTCCCTCCTTGTCCTAAGCTGTCTGTGGGCCCTGTCCC  300

seq1  TCCAGGGTGAGGCCCAGCACTTCGGCTCCAGGTCCGAGCTTTCTAGGAGC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGTGAGGCCCAGCACTTCGGCTCCAGGTCCGAGCTTTCTAGGAGC  350

seq1  AGGCCTAGCTTGTGTGTCTAGCCTTCCTGCTTTCACACCTGACGCTTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTAGCTTGTGTGTCTAGCCTTCCTGCTTTCACACCTGACGCTTTCC  400

seq1  CTGGGGGTTCTCAGCCCTGTTTGCACATTGACATCCAGGTGCTCTGGCCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGTTCTCAGCCCTGTTTGCACATTGACATCCAGGTGCTCTGGCCC  450

seq1  AATCCCATCATCCTGAGCCCCACACTTAGCTAATGTCAATTTCACTCGGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATCATCCTGAGCCCCACACTTAGCTAATGTCAATTTCACTCGGT  500

seq1  TTTCCCCCTGAGCCTCTTCCATCTTCTTTCTAAATCCTTCCTATCCTGCG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCTGAGCCTCTTCCATCTTCTTTCTAAATCCTTCCTATCCTGCG  550

seq1  GGGCTTTTAGTCTGTTGTGAAAGAGGCTTATGCTGTAAAAGCGGGGAATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTTAGTCTGTTGTGAAAGAGGCTTATGCTGTAAAAGCGGGGAATT  600

seq1  AGGTTGGATTTACGTGGTCTTAATTCCCTAATAATAATGCAGGGAGATTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGATTTACGTGGTCTTAATTCCCTAATAATAATGCAGGGAGATTA  650

seq1  ATAGTTTTATTCCAAGTTCACTGCAGCATCTTAAAAGCATGAAAGGCTGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTATTCCAAGTTCACTGCAGCATCTTAAAAGCATGAAAGGCTGG  700

seq1  GGCACCGGGTCTCTCTGTTCCCGGTGACAAGAGCAGGATCCCGTTTGCAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCGGGTCTCTCTGTTCCCGGTGACAAGAGCAGGATCCCGTTTGCAG  750

seq1  GGGACTGCTGTCATGAGGGAAAACACATGAATTC  774
      ||||||||||||||||||||||||||||||||||
seq2  GGGACTGCTGTCATGAGGGAAAACACATGAATTC  784