BAC Information

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BAC

Clone NameB6Ng01-052O07
Chromosome7 (Build37)
Map Location 93,517,013 - 93,518,209
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305
Downstream geneOlfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052O07.bB6Ng01-052O07.g
ACCDH876110DH876111
length1,0051,065
definitionDH876110|Mus musculus domesticus DNA, BAC clone: B6Ng01-052O07, 5' end.DH876111|Mus musculus domesticus DNA, BAC clone: B6Ng01-052O07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctgaaggggaggcctcaaggcctaacattattcctgaggcta
taaagtgcttacaaaaagaggcgtatcatgactgctctctaatagttcca
accagcagctgaaggagtcagatgcagatatttacacccaacaaatgtac
aaaagctactacccctgtggttgaattagggaaatgttggaagaagccga
ggagaaaggcaaccctataggaagaccaatagtcccaattaacctaggct
gcgtggatctttcagacactggacaaccaatcaggcatcatacaccacct
gttctttctgttaggaggaaacaataatttccaaatggcagtagtgtggc
ttggaaacgttcgtgtgcatcctagtttaaaacagaataaaacacaccat
tttcttaccttgaaggaaaggcatgcccaaacttctttttaattttccta
agaacctttggagttagctagacattttgccattgcatccaaggaaataa
atcatacacaaggggtcatacaccatgcaagtgacaaattcagaatttga
attcatcactgtcatatttcaacacctctgtcatttttgtcctattaggg
tgacaaagacagttggcaactgtaggctattttctgttcctcactctgaa
aaatatctatgccaagttaatctaatttcatagttattcctaggaaagac
agatactgaaggaaatgcaagatgatgtaaatgaatgaagagatcacatc
cgactttaaaaaaaattcatcgtttccagaaccaagacacaatgagcaca
aaacgaagccaaataaaacacatggaatgggggtgatgagcttgattgcc
aacattcttttcttatcagaataaaaacaagcctcctgccagccaggacc
attggcattattgaataaacttaatggatttacaacctctgacagattat
ttcgttatgcttgctgagatttagcagggtcatgtgttgtcataaatcac
caaat
gaattcaattgtgtagaaataacatatttttaattttccatttttcattt
gaggaacatcaaggatgtttacagttcccagctatttttttaataaaact
gctgtgaacatagttgcacaagtatctcctgagtatagagaagaatcttt
tcgatacaggtataggagtagtataccttggccttgaggtacaactcttc
tgagtttctggagaaaacaaatttatttgcaaaatggttgtacaagtttg
cacttctaccagcaatggaggagtgttctctttgctccatacctttgcca
tcttgtgctatcacttgagttttatggccttagccattctgaccagggtt
aggtggaatctcagagacattttgatttgcattttcttgatgactttaaa
cattttttaaagtgcttctcagtcatttgagattagtgaattgtttcctt
ctatccctctaacccagaaacaattatgtgtcagagttgtgactgtggga
tgcctccccacctttcttcattttatgccctgtctcctgcttgaggtggt
ttctatgggttgcctctctctactattgggcatttcacccaaatttgcct
gtttccatttctttctgctggcccttgggtcttcagtacttttccctcac
acaataccagatcaggttcccctctcattccctactcctttcagattcat
ggtccactttccctccaagtccttccctccctccccacttgtgattgctt
ttcttctccccatcaggtggaactgaggcattctttgggcacttcagctt
gctgatattttttgagttctgtagactatatcttggggtaactcagtact
ttattttatgtatttatggaattaatttatttatttattaatttaatttt
tatattttgggggctaacgtctacttattagtgagtacatacatgtgtgc
atttcgggtgggagttacctcactcagaaggaatttttatttcattcaat
tgctgcaaactcagaatgttttatttgttttgttggtgtgttgtttgtta
ggtttgcttctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93517013_93518209
seq2: B6Ng01-052O07.b_47_1051 (reverse)

seq1  ATTTGGTAGTATAGATTAACAGTGTGATCTGATAACATTTGTTCAGTTAC  50
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAGTCAGTTAGTATGTTATGCAGAATTTTATAAAGCCAATCATTGTTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTATTTTGTTCCTAACATATTGCTTATAAAGTGCTGTTTAAAAATATT  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTATTTTTTAATTATACACTTTGGTATTTCTTGTAATTTGGTTGATTT  200
                                           |||||| ||||||
seq2  -------------------------------------ATTTGG-TGATTT  12

seq1  ATGACAACACATGACCCTTGCTAAATCTCAGGCAAGCATAACGAAATAAT  250
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  ATGACAACACATGACCC-TGCTAAATCTCA-GCAAGCATAACGAAATAAT  60

seq1  CTGTCAGAGGTTGTAAATCCATTAAGTTTATTCAATAATGCCAATGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAGGTTGTAAATCCATTAAGTTTATTCAATAATGCCAATGGTCC  110

seq1  TGGCTGGCAGGAGGCTTGTTTTTTATTCTGATAAGAAAAGAATGTTTGGC  350
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  TGGCTGGCAGGAGGCTTG-TTTTTATTCTGATAAGAAAAGAATG-TTGGC  158

seq1  AATCAAGCTCATCACCCCCATTCCATGTGTTTTATTTGGCTTCGTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGCTCATCACCCCCATTCCATGTGTTTTATTTGGCTTCGTTTTGT  208

seq1  GCTCATTGTGTCTTGGTTCTGGAAACGATGAATTTTTTTTAAAGTCGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTGTGTCTTGGTTCTGGAAACGATGAATTTTTTTTAAAGTCGGAT  258

seq1  GTGATCTCTTCATTCATTTACATCATCTTGCATTTCCTTCAGTATCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTCTTCATTCATTTACATCATCTTGCATTTCCTTCAGTATCTGTC  308

seq1  TTTCCTAGGAATAACTATGAAATTAGATTAACTTGGCATAGATATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGGAATAACTATGAAATTAGATTAACTTGGCATAGATATTTTTC  358

seq1  AGAGTGAGGAACAGAAAATAGCCTACAGTTGCCAACTGTCTTTGTCACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGGAACAGAAAATAGCCTACAGTTGCCAACTGTCTTTGTCACCC  408

seq1  TAATAGGACAAAAATGACAGAGGTGTTGAAATATGACAGTGATGAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGACAAAAATGACAGAGGTGTTGAAATATGACAGTGATGAATTCA  458

seq1  AATTCTGAATTTGTCACTTGCATGGTGTATGACCCCTTGTGTATGATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGAATTTGTCACTTGCATGGTGTATGACCCCTTGTGTATGATTTA  508

seq1  TTTCCTTGGATGCAATGGCAAAATGTCTAGCTAACTCCAAAGGTTCTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGGATGCAATGGCAAAATGTCTAGCTAACTCCAAAGGTTCTTAG  558

seq1  GAAAATTAAAAAGAAGTTTGGGCATGCCTTTCCTTCAAGGTAAGAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAAAAAGAAGTTTGGGCATGCCTTTCCTTCAAGGTAAGAAAATG  608

seq1  GTGTGTTTTATTCTGTTTTAAACTAGGATGCACACGAACGTTTCCAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTATTCTGTTTTAAACTAGGATGCACACGAACGTTTCCAAGCC  658

seq1  ACACTACTGCCATTTGGAAATTATTGTTTCCTCCTAACAGAAAGAACAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACTGCCATTTGGAAATTATTGTTTCCTCCTAACAGAAAGAACAGG  708

seq1  TGGTGTATGATGCCTGATTGGTTGTCCAGTGTCTGAAAGATCCACGCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATGATGCCTGATTGGTTGTCCAGTGTCTGAAAGATCCACGCAGC  758

seq1  CTAGGTTAATTGGGACTATTGGTCTTCCTATAGGGTTGCCTTTCTCCTCG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTAATTGGGACTATTGGTCTTCCTATAGGGTTGCCTTTCTCCTCG  808

seq1  GCTTCTTCCAACATTTCCCTAATTCAACCACAGGGGTAGTAGCTTTTGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCCAACATTTCCCTAATTCAACCACAGGGGTAGTAGCTTTTGTA  858

seq1  CATTTGTTGGGTGTAAATATCTGCATCTGACTCCTTCAGCTGCTGGTTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGGGTGTAAATATCTGCATCTGACTCCTTCAGCTGCTGGTTGG  908

seq1  AACTATTAGAGAGCAGTCATGATACGCCTCTTTTTGTAAGCACTTTATAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTAGAGAGCAGTCATGATACGCCTCTTTTTGTAAGCACTTTATAG  958

seq1  CCTCAGGAATAATGTTAGGCCTTGAGGCCTCCCCTTCAGCTGAATTC  1197
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGAATAATGTTAGGCCTTGAGGCCTCCCCTTCAGCTGAATTC  1005