BAC Information

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BAC

Clone NameB6Ng01-054F10
Chromosome7 (Build37)
Map Location 7,650,166 - 7,807,460
singlet/doubletdoublet
Overlap geneLOC665485, EG625353, Vmn2r-ps40
Upstream genePeg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636
Downstream geneVmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054F10.bB6Ng01-054F10.g
ACCDH877107DH877108
length1,1521,049
definitionDH877107|Mus musculus domesticus DNA, BAC clone: B6Ng01-054F10, 5' end.DH877108|Mus musculus domesticus DNA, BAC clone: B6Ng01-054F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,806,286 - 7,807,460)(7,650,166 - 7,651,217)
sequence
gaattcaggcccatagtgttatagacatattgagtccttttctttaataa
tataataattatatatctctgtgaaatttattgctatgtctcatatattt
ttttatattctgttatttctatgtcataagatacaagattagaacttcac
aagtgaatttctctaagaaagaggggttatgagaatttgatgcatcattc
tttcatattttttacactaaaatttatctatcattataagacactttgga
tgtaggagataacttcatccaatctaactttatttctgtatattattatc
aagaggtacaacttatagaccgatttattttgccctataattacctgggt
atgactttttctaatctgatttgctggtaacacttttaggctgccaaatc
ttgtttaaatatttagattttatttgatcttattatctgtctcatgaaga
ggcacagaggcagacattgccagaatatttcagaaacttagtctaaatag
gagatctctgacatttttatgtgagtcaaaacctctagtgtacgatatta
ccttcaactagggcaatataagaatatctcttcgaaatgctaaatcagta
ttatgtacaggactctcctggtcaatagtagaaggaatcctggattatag
cataaagaccttctttaaaaaatattaatcaaataccccaaattgtaaaa
gtatcaaaatcccttcaaacattggaaacatggatatcaagattaaaact
gaaagacagaaaggcagatattataacatgcaaatatattttgttacttc
ttgtcaaacagctatgcttgctgttcccattagaagtggatctgccagga
ttccatatttgcacatttgaattagagatgagagtataagtcacaggtaa
tcaacagtttgcaggtaagtatgattacaggtgtttcaaggacactacac
ttcatgctgctctctgtgttgtagatcttcagcttactatgggccttcag
tttcatcttcagtgatgatgacatatccctatctctatcagatggcccaa
agaaccatctctagcatggcatgtcttcttcatactttacttcaactgac
tggatgctgtcatccagatggacgatcagaacatttcttttgagttgaaa
aa
gaattcaggaaatggggtaacatttgaaatataaataaataaaataaata
caaataaaacaaaggggagggcagggtgaaaatatggcaagagcctgaga
aacaggacgtttgctgtgagaatgcctctcctaaaaatggtagaaatata
tcaatgatgtctgatcaattaggtacctaaaaaaattggaaaaggtgatg
ctgattgacatgggaacatggaagtgtttaactttatgaaaactcaacaa
tatgcagagaactatagacaaccaaggaatgctgaaatagggaaagataa
tctacacaagggaggagattttcagttggtaatgcaacaccaagagttca
gccctgaagtatttatacatacaagttatgtactcagtaattttaattta
aatatttagaacattcataaatgtacactatgaatatgaaagtgtttgag
gagtgtgcatgggaatgattgaagtgttgaatgaaaaggggaagtgatat
aattatatttaaatcttaaaagtaaaacgtatttcttaaacaagttagaa
aaaaatattttcccagaatactttcatgttattattatgaaattttttat
tagattatactaagcgttctaatgatttctattgcttcacatgacagcaa
gtttttccttttactcataattcattagaaattaattctgacatgtagta
ctatgttcctttgatgagtattttaaatttggggaggttagatgtttcaa
agttaggaaacaaattgagggcaactgtcttagttagggttttactgctg
tgaacagacaccatgaccaaggtaaatcttataaaaaaaaaaccacattt
acttggggctggctacaggttcagaggttcagtccattataatcaagggg
ggagcatggcagcatccagcagcatggcacagacagagctgagagttcta
catcttcatccaaagctgtcagtggaagaattgacttctagggtactggg
gtagagtctaagccccactcaccatgacaccatcttactccaccaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7806286_7807460
seq2: B6Ng01-054F10.b_46_1197 (reverse)

seq1  TTTTTCAACTCTAAAAGAAATTGGTTTCCTTGATCGT-CATCTGGGATGA  49
      ||||||||||| |||||||||  |||    ||||||| ||||| ||||||
seq2  TTTTTCAACTC-AAAAGAAAT--GTT---CTGATCGTCCATCT-GGATGA  43

seq1  CAAGGCCAATCCAGTTCCAGTTGAAGTAAAGTATGAAGGAGACCATTGCC  99
      ||  ||  |||||||  ||||||||||||||||||||| ||||   ||||
seq2  CA--GC--ATCCAGT--CAGTTGAAGTAAAGTATGAAGAAGAC--ATGCC  85

seq1  AATGCTAGAGATGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATTG  149
       |||||||||||| || |||| ||||||||||||||||||||||||||  
seq2  -ATGCTAGAGATG-GTTCTTT-GGGCCATCTGATAGAGATAGGGATAT--  130

seq1  TTCATCATCACTGAAGATGGAACTGAAAGGCCCATAGGTAAGCTGAAGGA  199
       |||||||||||||||||| ||||| |||||||||| |||||||||| ||
seq2  GTCATCATCACTGAAGATGAAACTG-AAGGCCCATA-GTAAGCTGAA-GA  177

seq1  TCTACAACACAGAGAGCAGCATGAGGTGTAGTGTCCTTGAAAACACTTGT  249
      |||||||||||||||||||||||| |||||||||||||| |||||| |||
seq2  TCTACAACACAGAGAGCAGCATGAAGTGTAGTGTCCTTG-AAACACCTGT  226

seq1  AATCATACTTACCTGCAAACTGTTGATTACCTGTGACTTATACTCTCATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATACTTACCTGCAAACTGTTGATTACCTGTGACTTATACTCTCATC  276

seq1  TCTAATTCAAATGTGCAAATATGGAATCCTGGCAGATCCACTTCTAATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCAAATGTGCAAATATGGAATCCTGGCAGATCCACTTCTAATGG  326

seq1  GAACAGCAAGCATAGCTGTTTGACAAGAAGTAACAAAATATATTTGCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCAAGCATAGCTGTTTGACAAGAAGTAACAAAATATATTTGCATG  376

seq1  TTATAATATCTGCCTTTCTGTCTTTCAGTTTTAATCTTGATATCCATGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATCTGCCTTTCTGTCTTTCAGTTTTAATCTTGATATCCATGTT  426

seq1  TCCAATGTTTGAAGGAATTTTGATACTTTTACAATTTGGGGTATTTGATT  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCAATGTTTGAAGGGATTTTGATACTTTTACAATTTGGGGTATTTGATT  476

seq1  AATATTTTTTAAAGAAGGTCTTTATGCTATAATCCAGGATTCCTTCTACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTTAAAGAAGGTCTTTATGCTATAATCCAGGATTCCTTCTACT  526

seq1  ATTGACCAGGAGAGTCCTGTACATAATACTGATTTAGCATTTCGAAGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACCAGGAGAGTCCTGTACATAATACTGATTTAGCATTTCGAAGAGA  576

seq1  TATTCTTATATTGCCCTAGTTGAAGGTAATATCGTACACTAGAGGTTTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTATATTGCCCTAGTTGAAGGTAATATCGTACACTAGAGGTTTTG  626

seq1  ACTCACATAAAAATGTCAGAGATCTCCTATTTAGACTAAGTTTCTGAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATAAAAATGTCAGAGATCTCCTATTTAGACTAAGTTTCTGAAAT  676

seq1  ATTCTGGCAATGTCTGCCTCTGTGCCTCTTCATGAGACAGATAATAAGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCAATGTCTGCCTCTGTGCCTCTTCATGAGACAGATAATAAGAT  726

seq1  CAAATAAAATCTAAATATTTAAACAAGATTTGGCAGCCTAAAAGTGTTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAATCTAAATATTTAAACAAGATTTGGCAGCCTAAAAGTGTTAC  776

seq1  CAGCAAATCAGATTAGAAAAAGTCATACCCAGGTAATTATAGGGCAAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAATCAGATTAGAAAAAGTCATACCCAGGTAATTATAGGGCAAAAT  826

seq1  AAATCGGTCTATAAGTTGTACCTCTTGATAATAATATACAGAAATAAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGGTCTATAAGTTGTACCTCTTGATAATAATATACAGAAATAAAGT  876

seq1  TAGATTGGATGAAGTTATCTCCTACATCCAAAGTGTCTTATAATGATAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGGATGAAGTTATCTCCTACATCCAAAGTGTCTTATAATGATAGA  926

seq1  TAAATTTTAGTGTAAAAAATATGAAAGAATGATGCATCAAATTCTCATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTAGTGTAAAAAATATGAAAGAATGATGCATCAAATTCTCATAA  976

seq1  CCCCTCTTTCTTAGAGAAATTCACTTGTGAAGTTCTAATCTTGTATCTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTTTCTTAGAGAAATTCACTTGTGAAGTTCTAATCTTGTATCTTA  1026

seq1  TGACATAGAAATAACAGAATATAAAAAAATATATGAGACATAGCAATAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGAAATAACAGAATATAAAAAAATATATGAGACATAGCAATAAA  1076

seq1  TTTCACAGAGATATATAATTATTATATTATTAAAGAAAAGGACTCAATAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGAGATATATAATTATTATATTATTAAAGAAAAGGACTCAATAT  1126

seq1  GTCTATAACACTATGGGCCTGAATTC  1175
      ||||||||||||||||||||||||||
seq2  GTCTATAACACTATGGGCCTGAATTC  1152

seq1: chr7_7650166_7651217
seq2: B6Ng01-054F10.g_67_1115

seq1  GAATTCAGGAAATGGGGTAACATTTGAAATATAAATAAATAAAATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATGGGGTAACATTTGAAATATAAATAAATAAAATAAATA  50

seq1  CAAATAAAACAAAGGGGAGGGCAGGTTGAAAATATGGCAAGAGCCTGAGA  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAAATAAAACAAAGGGGAGGGCAGGGTGAAAATATGGCAAGAGCCTGAGA  100

seq1  AACAGGACGTTTGCTGTGAGAATGCCTCTCCTAAAAATGGTAGAAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGACGTTTGCTGTGAGAATGCCTCTCCTAAAAATGGTAGAAATATA  150

seq1  TCAATGATGTCTGATCAATTAGGTACCTAAAAAAATTGGAAAAGATGATG  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAATGATGTCTGATCAATTAGGTACCTAAAAAAATTGGAAAAGGTGATG  200

seq1  CTGATTGACATGGGAACATGGAAGTGTTTAACTTTATGAAAACTCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGACATGGGAACATGGAAGTGTTTAACTTTATGAAAACTCAACAA  250

seq1  TATGCAGAGAACTATAGACAACCAAGGAATGCTGAAATAGGGAAAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGAGAACTATAGACAACCAAGGAATGCTGAAATAGGGAAAGATAA  300

seq1  TCTACACAAGGGAGGAGATTTTCAGTTGGTAATGCAACACCAAGAGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACAAGGGAGGAGATTTTCAGTTGGTAATGCAACACCAAGAGTTCA  350

seq1  GCCCTGAAGTATTTATACATACAAGTTATGTACTCAGTAATTTTAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGAAGTATTTATACATACAAGTTATGTACTCAGTAATTTTAATTTA  400

seq1  AATATTTAGAACATTCATAAATGTACACTATGAATATGAAAGTGTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAGAACATTCATAAATGTACACTATGAATATGAAAGTGTTTGAG  450

seq1  GAGTGTGCATGGGAATGATTGAAGTGTTGAATGAAAAGGGGAAGTGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCATGGGAATGATTGAAGTGTTGAATGAAAAGGGGAAGTGATAT  500

seq1  AATTATATTTAAATCTTAAAAGTAAAACGTATTTCTTAAACAAGTTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATTTAAATCTTAAAAGTAAAACGTATTTCTTAAACAAGTTAGAA  550

seq1  AAAAATATTTTCCCAGAATACTTTCATGTTATTATTATGAAATTTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTCCCAGAATACTTTCATGTTATTATTATGAAATTTTTTAT  600

seq1  TAGATTATACTAAGCGTTCTAATGATTTCTATTGCTTCACATGACAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTATACTAAGCGTTCTAATGATTTCTATTGCTTCACATGACAGCAA  650

seq1  GTTTTTCCTTTTACTCATAATTCATTAGAAATTAATTCTGACATGTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCTTTTACTCATAATTCATTAGAAATTAATTCTGACATGTAGTA  700

seq1  CTATGTTCCTTTGATGAGTATTTTAAATTTGGGGAGGTTAGATGTTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCCTTTGATGAGTATTTTAAATTTGGGGAGGTTAGATGTTTCAA  750

seq1  AGTTAGGAAACAAATTGAGGGCAACTGTCTTAGTTAGGGTTTTACTGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGAAACAAATTGAGGGCAACTGTCTTAGTTAGGGTTTTACTGCTG  800

seq1  TGAACAGACACCATGACCAAGGTAAATCTTATAAAAAAAAA--CACATTT  848
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  TGAACAGACACCATGACCAAGGTAAATCTTATAAAAAAAAAACCACATTT  850

seq1  ACTTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGG  898
      ||||||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  ACTTGGGGCTGGC-TACAGGTTCAGAGGTTCAGTCCATTATAATCAAGGG  899

seq1  GGGAGCATGGCAGCATCCAGGCAGGCATGGCACAGACAGAGCTGAGAGTT  948
      ||||||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  GGGAGCATGGCAGCATCCA-GCA-GCATGGCACAGACAGAGCTGAGAGTT  947

seq1  CTACATCTTCATCCAAAGGCTGCTAGTGGAAG-ACTGACTTCCAGGTAAC  997
      ||||||||||||||||| ||||  |||||||| | ||||||| |||  ||
seq2  CTACATCTTCATCCAAA-GCTGTCAGTGGAAGAATTGACTTCTAGGGTAC  996

seq1  TGGGGTGAGAGTCTTAAGACCACACTCACAGTGACAC--ACCTACTCCAA  1045
      |||||| |||||| |||| || |||||||  ||||||   | |||||| |
seq2  TGGGGT-AGAGTC-TAAG-CCCCACTCACCATGACACCATCTTACTCC-A  1042

seq1  CCAGGTA  1052
      |||||||
seq2  CCAGGTA  1049