BAC Information

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BAC

Clone NameB6Ng01-054J14
Chromosome7 (Build37)
Map Location 55,849,849 - 55,850,970
singlet/doubletsinglet
Overlap genenone
Upstream geneMrgpra3, Mrgprc1-ps, LOC100040314, Mrgprc3-ps, EG435977, EG619792, Mrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps
Downstream geneMrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465, 9130015G15Rik, 5330421F07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054J14.bB6Ng01-054J14.g
ACCDH877299DH877300
length1,116281
definitionDH877299|Mus musculus domesticus DNA, BAC clone: B6Ng01-054J14, 5' end.DH877300|Mus musculus domesticus DNA, BAC clone: B6Ng01-054J14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttcaataccatcacagccaatgaaccagaatcttaccctcac
ctaacgtctgtgccatcctccaagcagaaccgttagcttatctactatgc
aggaaaaatcctttggtgatgtgacggacattcaagtacagccttattac
aatgaactccaatgtccaaaaactgttcgtattctgtgtttgtaccacag
taagagccaagattttaagctctactaaaaacaaaacaaaacaaacaaaa
agactttatgtttttaagttcattttaaaaaaaactaacagtaatatatt
actttaaaatatcacacagttaatatatttggggttacttaaaattcatt
ttgagaaaaacatatttattttcagtatttctgtagacaaacacctacat
gagactgttcaattgattgttgttttatatcaaacaacttttataatact
catttttattgttacaatatttaaaaaaggtttaagactatgataaaaaa
tgaaaggtattctaggttttgagggatgtctcttggaggagttggggcac
aaaagggaaagaagaatgtgatatatgtctatttaatcaaaatgtgtttt
taaatgttaacaaattcagaaaaaataaaataaaataaaaccccctcata
aaaagagtctgaggtaatcaagacacaaaaagatatctctccccatttcc
attccttttgtcataactctgtgcctcagaggtcagcactgtccatattt
ctgttataaactaaaatttacagtgaaaattgaaggagtgtatcatgaag
actgatatgggcatggtcaaagtttttattgttgaacaaactaacctgta
caccatttcacttgtgaactaatatttttccctgtggcaaaaatttcata
attagaaacagtcctatatgaaatgcactgttatttcatagagatttcat
gatgttcaattctgtgtggtttgagagagatagcctacatatgctcactt
agttcatttggtcacacttggtggggttgtttaggaatgataaaggagat
aggaccattagagatgctagatggtattttgagctttcaaaccacatttt
aatttccataccttac
ataacatcacccttgggcctgaaataatgtaagagaagtagatagagaga
aataccatcttctaagcatgacatggtcaaggtagtcatgaactcccagc
tgttttgtttactgacactgggcctatgcaagttggttccatgagaaagt
cagccatggatagaaaggagattaggatggccttatatggtatcagtggg
aggggatacccttggtcctgtgaaggttcaatgccccagcataggggaat
gctagggtggtgaggtgagagtgtgtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_55849849_55850970
seq2: B6Ng01-054J14.b_38_1153

seq1  GAATTCTTTTCAATACCATCACAGCCAATGAACCAGAATCTTACCCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAATACCATCACAGCCAATGAACCAGAATCTTACCCTCAC  50

seq1  CTAACGTCTGTGCCATCCTCCAAGCAGAACCGTTAGCTTATCTACTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACGTCTGTGCCATCCTCCAAGCAGAACCGTTAGCTTATCTACTATGC  100

seq1  AGGAAAAATCCTTTGGTGATGTGACGGACATTCAAGTACAGCCTTATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAATCCTTTGGTGATGTGACGGACATTCAAGTACAGCCTTATTAC  150

seq1  AATGAACTCCAATGTCCAAAAACTGTTCGTATTCTGTGTTTGTACCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTCCAATGTCCAAAAACTGTTCGTATTCTGTGTTTGTACCACAG  200

seq1  TAAGAGCCAAGATTTTAAGCTCTACTAAAAACAAAACAAAACAAACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCCAAGATTTTAAGCTCTACTAAAAACAAAACAAAACAAACAAAA  250

seq1  AGACTTTATGTTTTTAAGTTCATTTTAAAAAAAACTAACAGTAATATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTATGTTTTTAAGTTCATTTTAAAAAAAACTAACAGTAATATATT  300

seq1  ACTTTAAAATATCACACAGTTAATATATTTGGGGTTACTTAAAATTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAATATCACACAGTTAATATATTTGGGGTTACTTAAAATTCATT  350

seq1  TTGAGAAAAACATATTTATTTTCAGTATTTCTGTAGACAAACACCTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAAACATATTTATTTTCAGTATTTCTGTAGACAAACACCTACAT  400

seq1  GAGACTGTTCAATTGATTGTTGTTTTATATCAAACAACTTTTATAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGTTCAATTGATTGTTGTTTTATATCAAACAACTTTTATAATACT  450

seq1  CATTTTTATTGTTACAATATTTAAAAAAGGTTTAAGACTATGATAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATTGTTACAATATTTAAAAAAGGTTTAAGACTATGATAAAAAA  500

seq1  TGAAAGGTATTCTAGGTTTTGAGGGATGTCTCTTGGAGGAGTTGGGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTATTCTAGGTTTTGAGGGATGTCTCTTGGAGGAGTTGGGGCAC  550

seq1  AAAAGGGAAAGAAGAATGTGATATATGTCTATTTAATCAAAATGTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGAAAGAAGAATGTGATATATGTCTATTTAATCAAAATGTGTTTT  600

seq1  TAAATGTTAACAAATTCAGAAAAAATAAAATAAAATAAAACCCCCTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTAACAAATTCAGAAAAAATAAAATAAAATAAAACCCCCTCATA  650

seq1  AAAAGAGTCTGAGGTAATCAAGACACAAAAAGATATCTCTCCCCATTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGTCTGAGGTAATCAAGACACAAAAAGATATCTCTCCCCATTTCC  700

seq1  ATTCCTTTTGTCATAACTCTGTGCCTCAGAGGTCAGCACTGTCCATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTTGTCATAACTCTGTGCCTCAGAGGTCAGCACTGTCCATATTT  750

seq1  CTGTTATAAACTAAAATTTACAGTGAAAATTGAAGGAGTGTATCATGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATAAACTAAAATTTACAGTGAAAATTGAAGGAGTGTATCATGAAG  800

seq1  ACTGATATGGGCATGGTCAAAGGTTTTTATTGTTGAACAAACTAACCTGT  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTGATATGGGCATGGTCAAA-GTTTTTATTGTTGAACAAACTAACCTGT  849

seq1  ACACCATTTCACTTGTGAACTAATATTTTTCCCTGTGGCAAAAATTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTTCACTTGTGAACTAATATTTTTCCCTGTGGCAAAAATTTCAT  899

seq1  AATTAGAAACAGTCCTATATGAAATGCACTGTTATTTCATAGAGATTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAACAGTCCTATATGAAATGCACTGTTATTTCATAGAGATTTCA  949

seq1  TGATGTTCAATTCTGTTGTGGTTTGAGAGAGAATAGCCTACATATGCTCA  1000
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TGATGTTCAATTCTG-TGTGGTTTGAGAGAG-ATAGCCTACATATGCTCA  997

seq1  CTTAGTTCAATTTTGGTCCACACTTGGTGGGGTTGTTTAGGAATGATAAA  1050
      |||||||||  |||||| ||||||||||||||||||||||||||||||||
seq2  CTTAGTTCA--TTTGGT-CACACTTGGTGGGGTTGTTTAGGAATGATAAA  1044

seq1  -GAGATAGGACCCATTAGAGATGCTAGGATGGTATTTTGAGCTTCAAAAC  1099
       ||||||||| ||||||||||||||| |||||||||||||||||  ||||
seq2  GGAGATAGGA-CCATTAGAGATGCTA-GATGGTATTTTGAGCTTTCAAAC  1092

seq1  CACATGTT-ATTTCCATACCTTAC  1122
      ||||| || |||||||||||||||
seq2  CACATTTTAATTTCCATACCTTAC  1116