BAC Information

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BAC

Clone NameB6Ng01-054K10
Chromosome7 (Build37)
Map Location 68,341,043 - 68,342,185
singlet/doubletsinglet
Overlap geneD0Kist2
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, LOC100041248
Downstream geneLOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054K10.bB6Ng01-054K10.g
ACCDH877339DH877340
length1,1341,126
definitionDH877339|Mus musculus domesticus DNA, BAC clone: B6Ng01-054K10, 5' end.DH877340|Mus musculus domesticus DNA, BAC clone: B6Ng01-054K10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatcttttaagggggctatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattaatacc
ctatctaatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcaggagctttgcagtttca
tgaggttccatttgtcagtcctcgatcttaaagcacaagccattgctgtt
ctattcaggaattttttcccctgtgcccatatcttcgagactttccccca
ttttctcctctataagtttcagtgtctctggttttatgtggagttccttg
atccacttagatttgaccttagtacaaggaaagaggaatgggtcgattca
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctcttttttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattgct
ctacttgtctgtcactctaccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagagttactttt
atccttgagaagagcttttgctatcctaggttttttgttattccagatga
atttgcagattgctctttccaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttcacaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatctttttaaatttctttcttcagagacttgaagtttttagcaaca
cttcttaacataagaaagtgtcaggtttggtggctgcattggtatggatt
cccaggtggggcaatctctggaatgcattcttcagtctctgcttcactca
ttgtccttgtattcatttagaggaggagacattctgagtaaaattttgag
gtgggtgtcccatcttcatgtgggcattctacttggatagctataaggtc
tctattttgtaatttcagctaactgcatcgctgt
gaattccaaacaacccaaattgttgccaaaactattggttcctcttccca
aactgacagcatgttcccattgttgatgacagtgcttagaaattttatta
aaatgaacatgtcaagtcagtgttttcatagtcctcaaactgctacattc
cagggtttttcataatgtactagatccttcccacatatagtataacttcc
aaataacggaatttatgggctggttgagtgtaaaactaagtgggtttctt
attactgtgttttgtgtttggttcagatctttctgtgaatttttcttggc
ccaatgttattatcataattgtagtattatttttaaattaatctcttatt
ggtgactacctgattcaatgatttatgttcctgaatgaaaaacacacaac
ctttatatttaatatgaatttaatagcacaatagctaagtaactgcctaa
cttctttgctgttagaatctacatcccacacataactctgggttactact
tactaatttcgttcttctattttggctgctctttatttaatggagcagca
atccaggccatgttcttcgggatcatttacatggtagctctgcttttctc
tcctgcacattccccaggcacttcatctctctgtccttcctcttcatcat
gtttccaaacatgggaaccttaaatcctacagctttctcttctccccaac
ccttagcttctgtgatctttatttaccaatcataattaactgggcgcatg
ttcccaaaagctatttgcatatcccttcctggaaacaagttttttggaca
aaatttacattaaaatacagttacattgaggcagggagtaactccaagcc
agtattgataagtctatgcccactatagataacttttgttttatttattt
cattatatttactgtcatatcttaaaatgaatgatggatggaaattttta
catatatatggaaaatgtgggtactaggataaggagtatcagagactcct
cacatatactatcagaggacatcaaatttagttttccatacagcataaga
gtgacacaggtacctcaggtaggataggtctcaggtcatgatgttcatca
acaataatggactccccagttctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68341043_68342185
seq2: B6Ng01-054K10.g_67_1192

seq1  GAATTCCAAACAACCCAAATTGTTGCCAAAACTATTGGTTCCTCTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACAACCCAAATTGTTGCCAAAACTATTGGTTCCTCTTCCCA  50

seq1  AACTGACAGCATGTTCCCATTGTTGATGACAGTGCTTAGAAATTTTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACAGCATGTTCCCATTGTTGATGACAGTGCTTAGAAATTTTATTA  100

seq1  AAATGAACATGTCAAGTCAGTGTTTTCATAGTCCTCAAACTGCTACATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACATGTCAAGTCAGTGTTTTCATAGTCCTCAAACTGCTACATTC  150

seq1  CAGGGTTTTTCATAATGTACTAGATCCTTCCCACATATAGTATAACTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTTTCATAATGTACTAGATCCTTCCCACATATAGTATAACTTCC  200

seq1  AAATAACGGAATTTATGGGCTGGTTGAGTGTAAAACTAAGTGGGTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACGGAATTTATGGGCTGGTTGAGTGTAAAACTAAGTGGGTTTCTT  250

seq1  ATTACTGTGTTTTGTGTTTGGTTCAGATCTTTCTGTGAATTTTTCTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTGTTTTGTGTTTGGTTCAGATCTTTCTGTGAATTTTTCTTGGC  300

seq1  CCAATGTTATTATCATAATTGTAGTATTATTTTTAAATTAATCTCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTATTATCATAATTGTAGTATTATTTTTAAATTAATCTCTTATT  350

seq1  GGTGACTACCTGATTCAATGATTTATGTTCCTGAATGAAAAACACACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTACCTGATTCAATGATTTATGTTCCTGAATGAAAAACACACAAC  400

seq1  CTTTATATTTAATATGAATTTAATAGCACAATAGCTAAGTAACTGCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTTAATATGAATTTAATAGCACAATAGCTAAGTAACTGCCTAA  450

seq1  CTTCTTTGCTGTTAGAATCTACATCCCACACATAACTCTGGGTTACTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGCTGTTAGAATCTACATCCCACACATAACTCTGGGTTACTACT  500

seq1  TACTAATTTCGTTCTTCTATTTTGGCTGCTCTTTATTTAATGGAGCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTTCGTTCTTCTATTTTGGCTGCTCTTTATTTAATGGAGCAGCA  550

seq1  ATCCAGGCCATGTTCTTCGGGATCATTTACATGGTAGCTCTGCTTTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGCCATGTTCTTCGGGATCATTTACATGGTAGCTCTGCTTTTCTC  600

seq1  TCCTGCACATTCCCCAGGCACTTCATCTCTCTGTCCTTCCTCTTCATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACATTCCCCAGGCACTTCATCTCTCTGTCCTTCCTCTTCATCAT  650

seq1  GTTTCCAAACATGGGAACCTTAAATCCTACAGCTTTCTCTTCTCCCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAACATGGGAACCTTAAATCCTACAGCTTTCTCTTCTCCCCAAC  700

seq1  CCTTAGCTTCTGTGATCTTTATTTACCAATCATAATTAACTGGGCGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCTTCTGTGATCTTTATTTACCAATCATAATTAACTGGGCGCATG  750

seq1  TTCCCAAAAGCTATTTGCATATCCCTTCCTGGAAACAAGTTTTTTGGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAAAGCTATTTGCATATCCCTTCCTGGAAACAAGTTTTTTGGACA  800

seq1  AAATTTACATTAAAATACAGTTACATTGAGGCAGGGAGTAACTCCAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACATTAAAATACAGTTACATTGAGGCAGGGAGTAACTCCAAGCC  850

seq1  AGTATTGATAAGTCTATGCCCACTATAGATAACTTTTGTTTTATTTTATT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGTATTGATAAGTCTATGCCCACTATAGATAACTTTTGTTTTA-TTTATT  899

seq1  TCATTATATTTACTGTCATATCTTTAAAAATGAATGAATGGATGGAAATT  950
      ||||||||||||||||||||||||  |||||||||| |||||||||||||
seq2  TCATTATATTTACTGTCATATCTT--AAAATGAATG-ATGGATGGAAATT  946

seq1  TTTACATATATATGGAAAATGTGGGTACTAGGATAAAGAGTATCAAGAGA  1000
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TTTACATATATATGGAAAATGTGGGTACTAGGATAAGGAGTATC-AGAGA  995

seq1  ACTCTCACATATAACTAATCAGA-GACATCAAATTTAGTTTTCCATTAAC  1049
         ||||||||| ||| |||||| ||||||||||||||||||||||  ||
seq2  CTCCTCACATAT-ACT-ATCAGAGGACATCAAATTTAGTTTTCCAT--AC  1041

seq1  AGCATAAAGAGTGACACAAGGTACCTCAAGTAGGATAGGTCTCAGGTTCA  1099
      ||||| ||||||||||| |||||||||| ||||||||||||||||||   
seq2  AGCAT-AAGAGTGACAC-AGGTACCTCAGGTAGGATAGGTCTCAGGT--C  1087

seq1  ATGAATGTTCATCAACACATAATTGGACTCCACAGTTTTCTGAA  1143
      ||| ||||||||||||| |||| |||||||| |||  |||||||
seq2  ATG-ATGTTCATCAACA-ATAA-TGGACTCCCCAG--TTCTGAA  1126