BAC Information

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BAC

Clone NameB6Ng01-055E01
Chromosome7 (Build37)
Map Location 18,488,908 - 18,576,125
singlet/doubletdoublet
Overlap geneEG381852, Ceacam11
Upstream genePtgir, Calm3, EG434128, 0710005I19Rik, LOC100042835, LOC434130, Ppp5c, Hif3a, Psg16, LOC100042844, LOC640145, Ceacam3, Psg29, LOC414361, LOC671132, LOC100042868, Psg-ps1, LOC666767, Psg30, Ppia-ps7_184.1, Ceacam14
Downstream geneCeacam13, LOC384560, Ceacam12, Igfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831, EG574429, EG232930, Psg25, EG545925, Psg23, Psg21, EG434540, BC050099, LOC666863, Sycp1-ps1, Psg19, Psg17, Mill2, Pglyrp1, C530028I08Rik, Nova2, Nanos2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055E01.bB6Ng01-055E01.g
ACCDH877759DH877760
length1,036589
definitionDH877759|Mus musculus domesticus DNA, BAC clone: B6Ng01-055E01, 5' end.DH877760|Mus musculus domesticus DNA, BAC clone: B6Ng01-055E01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,488,908 - 18,489,945)(18,575,537 - 18,576,125)
sequence
gaattccaagctcctctgcttcaaggattttctaggacatggtgggacac
tggtggaggctcacctattttaaattcaatctttaaaggcacttataata
aaagaatactgaaatagagcatacaccttactaatgtggggatagggttt
gagtattcgggctatgagaatgccaaggtttcaggaggctgtttccttga
aactctttgcctagtgactgcctccaggccatttgacctcgacaggcaga
cttcactggagtgagcgtagcattctcccttgtaccaaacaagtaattga
tagaaagcaattcagcttaagaagtctgagtctatcaaaaatcagagttg
tagctatgaaaatgaggaaaccattgcattctttcagggaagtgaatacc
aggaatacctgatcacagtcaactgaaccaggcttaaccacaggggaccc
tggggatcatttgcaatgatattatccttaattttttcactgcttatagg
gaaccagtgttaggccaataatatcaaactggggtatttattagttccaa
gcttcagaggtctgtaaatataatctacaatctcatgcagataaaatgag
gagtgctgcatactggattgccccttatgatttgctcagtgtgttctctt
ttatcatacacccatgggtgtatgcagtggtctggattctgcaatataaa
tatcccattaaacaatatatactacaggtaacccctgtagtatcatattc
aactaggcttccatatttcaaaggacactagcatgtgtcaagatcacttg
aagccagccattctactatctgaaacttttctaataccttagtctgcaaa
gttcagacttctccttgccctcatttgcaccaatcccatgggctgcaggg
cagagcagcagcacacctatcagctggagtagtggttggctgtagcataa
agaaaattggaaaaagtcacaaagagtcatctcaaacttaagtgggcatg
ggagtattttgactgaggcagtgaggatacacacac
gaattcagtacaaagcctgaccacaagacactcaagatggagctgtgtca
ttactgaagtcacatttgcagaggctcagagagagcttctggagatctgt
cattactgtgctgatttctgtagaaattcacctgttcctcttttccttgt
gtgtcttttaagtaaatttctgctctctttcactctctttgtctctcact
ctattctccattgttctttcatactataagaacaacaacaacaaaaattc
cacttggcttcttacactcatacaacagcacaaaacagtgttagttcaat
ttctccaggaagagctgactgtaaaagccatcaccttctcaagagggttc
cctgtctcccactccctcaggaacccacactcttgtactatgaattacta
tctttgtactgagaggggtcttgttctggagggttcctggccctgggaca
tcttgatgatgagttctttctctgctatgatggaaacagagttctggggc
ccaggatcaaagagcatgttggagctgagacctggaaaagagagacagtg
atggcaggaggaggaggaggagaaagtgtgtgtgtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_18488908_18489945
seq2: B6Ng01-055E01.b_46_1081

seq1  GAATTCCAAGCTCCTCTGCTTCAAGGATTTTCTAGGACATGGTGGGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTCCTCTGCTTCAAGGATTTTCTAGGACATGGTGGGACAC  50

seq1  TGGTGGAGGCTCACCTATTTTAAATTCAATCTTTAAAGGCACTTATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGGCTCACCTATTTTAAATTCAATCTTTAAAGGCACTTATAATA  100

seq1  AAAGAATACTGAAATAGAGCATACACCTTACTAATGTGGGGATAGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATACTGAAATAGAGCATACACCTTACTAATGTGGGGATAGGGTTT  150

seq1  GAGTATTCGGGCTATGAGAATGCCAAGGTTTCAGGAGGCTGTTTCCTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTCGGGCTATGAGAATGCCAAGGTTTCAGGAGGCTGTTTCCTTGA  200

seq1  AACTCTTTGCCTAGTGACTGCCTCCAGGCCATTTGACCTCGACAGGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTGCCTAGTGACTGCCTCCAGGCCATTTGACCTCGACAGGCAGA  250

seq1  CTTCACTGGAGTGAGCGTAGCATTCTCCCTTGTACCAAACAAGTAATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGGAGTGAGCGTAGCATTCTCCCTTGTACCAAACAAGTAATTGA  300

seq1  TAGAAAGCAATTCAGCTTAAGAAGTCTGAGTCTATCAAAAATCAGAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCAATTCAGCTTAAGAAGTCTGAGTCTATCAAAAATCAGAGTTG  350

seq1  TAGCTATGAAAATGAGGAAACCATTGCATTCTTTCAGGGAAGTGAATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATGAAAATGAGGAAACCATTGCATTCTTTCAGGGAAGTGAATACC  400

seq1  AGGAATACCTGATCACAGTCAACTGAACCAGGCTTAACCACAGGGGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATACCTGATCACAGTCAACTGAACCAGGCTTAACCACAGGGGACCC  450

seq1  TGGGGATCATTTGCAATGATATTATCCTTAATTTTTTCACTGCTTATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCATTTGCAATGATATTATCCTTAATTTTTTCACTGCTTATAGG  500

seq1  GAACCAGTGTTAGGCCAATAATATCAAACTGGGGTATTTATTAGTTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGTGTTAGGCCAATAATATCAAACTGGGGTATTTATTAGTTCCAA  550

seq1  GCTTCAGAGGTCTGTAAATATAATCTACAATCTCATGCAGATAAAATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGAGGTCTGTAAATATAATCTACAATCTCATGCAGATAAAATGAG  600

seq1  GAGTGCTGCATACTGGATTGCCCCTTATGATTTGCTCAGTGTGTTCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGCATACTGGATTGCCCCTTATGATTTGCTCAGTGTGTTCTCTT  650

seq1  TTATCATACACCCATGGGTGTATGCAGTGGTCTGGATTCTGCAATATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATACACCCATGGGTGTATGCAGTGGTCTGGATTCTGCAATATAAA  700

seq1  TATCCCATTAAACAATATATACTACAGGTAACCCCTGTAGTATCATATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCATTAAACAATATATACTACAGGTAACCCCTGTAGTATCATATTC  750

seq1  AACTAGGCTTCCATATTTCAAAGGACACTAGCATGTGTCAAGATCACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGCTTCCATATTTCAAAGGACACTAGCATGTGTCAAGATCACTTG  800

seq1  AAGCCAGCCATTCTACTATCTGAAACTTTTCTAATACCTTAGTCTGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCCATTCTACTATCTGAAACTTTTCTAATACCTTAGTCTGCAAA  850

seq1  GTTCAGACTTCTCCTTGCCCTCATTTGCACCAATCCCATGGGCTGCAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGACTTCTCCTTGCCCTCATTTGCACCAATCCCATGGGCTGCAGGG  900

seq1  CAGAGCAGCAGCACACCTATCAGCTGGAGTAGTGGTTGGCTGTAGCAATA  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGAGCAGCAGCACACCTATCAGCTGGAGTAGTGGTTGGCTGTAGC-ATA  949

seq1  AAGAAAATTGGAAAAAAGTCACAAAGAGTCATCTCAAACTTAAGTGGGCA  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTGG-AAAAAGTCACAAAGAGTCATCTCAAACTTAAGTGGGCA  998

seq1  TGGGAGTA-TCTGACTGAGGGCAGTGAGGATACACACAC  1038
      |||||||| | ||||||| ||||||||||||||||||||
seq2  TGGGAGTATTTTGACTGA-GGCAGTGAGGATACACACAC  1036

seq1: chr7_18575537_18576125
seq2: B6Ng01-055E01.g_66_654 (reverse)

seq1  CCACACACACACACTTTCTCCTCCTCCTCCTCCTGCCATCACTGTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACACACACTTTCTCCTCCTCCTCCTCCTGCCATCACTGTCTCTC  50

seq1  TTTTCCAGGTCTCAGCTCCAACATGCTCTTTGATCCTGGGCCCCAGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGGTCTCAGCTCCAACATGCTCTTTGATCCTGGGCCCCAGAACT  100

seq1  CTGTTTCCATCATAGCAGAGAAAGAACTCATCATCAAGATGTCCCAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCATCATAGCAGAGAAAGAACTCATCATCAAGATGTCCCAGGGC  150

seq1  CAGGAACCCTCCAGAACAAGACCCCTCTCAGTACAAAGATAGTAATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACCCTCCAGAACAAGACCCCTCTCAGTACAAAGATAGTAATTCAT  200

seq1  AGTACAAGAGTGTGGGTTCCTGAGGGAGTGGGAGACAGGGAACCCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGAGTGTGGGTTCCTGAGGGAGTGGGAGACAGGGAACCCTCTTG  250

seq1  AGAAGGTGATGGCTTTTACAGTCAGCTCTTCCTGGAGAAATTGAACTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGATGGCTTTTACAGTCAGCTCTTCCTGGAGAAATTGAACTAAC  300

seq1  ACTGTTTTGTGCTGTTGTATGAGTGTAAGAAGCCAAGTGGAATTTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGTGCTGTTGTATGAGTGTAAGAAGCCAAGTGGAATTTTTGTT  350

seq1  GTTGTTGTTCTTATAGTATGAAAGAACAATGGAGAATAGAGTGAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTCTTATAGTATGAAAGAACAATGGAGAATAGAGTGAGAGACA  400

seq1  AAGAGAGTGAAAGAGAGCAGAAATTTACTTAAAAGACACACAAGGAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTGAAAGAGAGCAGAAATTTACTTAAAAGACACACAAGGAAAAG  450

seq1  AGGAACAGGTGAATTTCTACAGAAATCAGCACAGTAATGACAGATCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGGTGAATTTCTACAGAAATCAGCACAGTAATGACAGATCTCCA  500

seq1  GAAGCTCTCTCTGAGCCTCTGCAAATGTGACTTCAGTAATGACACAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCTCTCTGAGCCTCTGCAAATGTGACTTCAGTAATGACACAGCTC  550

seq1  CATCTTGAGTGTCTTGTGGTCAGGCTTTGTACTGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGAGTGTCTTGTGGTCAGGCTTTGTACTGAATTC  589