BAC Information

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BAC

Clone NameB6Ng01-055L06
Chromosome7 (Build37)
Map Location 56,311,956 - 56,457,882
singlet/doubletdoublet
Overlap gene9130015G15Rik
Upstream geneMrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465
Downstream gene5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5, Nell1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055L06.bB6Ng01-055L06.g
ACCDH878073DH878074
length1,0991,055
definitionDH878073|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L06, 5' end.DH878074|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,456,765 - 56,457,882)(56,311,956 - 56,313,029)
sequence
gaattccctttgctgacaaggaaagcttagggtattttagggtctggcag
cacctcttccttttgtagctgatgcatcactaggattttccacatctctg
atccacagatgtggtggttacatgtccaccttctcacctgtccatcaact
gcctgtccatcatttcactagcatcccaagagggtggacaaagtactgac
cttcagggcaatttcctagttatttcttgaaaggcatgtcacatagagga
aaggactccagaaggggttaaccgagaaagtacagtcagcgttgtgcttt
ctgctccctcagaggcccttttaagaccccatgagagtatgaggagacag
caggcttgcctctggcttcatgagcagatgagctgatgggagagagccaa
gatgctgagtagccaagcttggtcactgggacaaagtggctccgcatccc
tcttcaacttcaaaacacggatgagtcaagagcttgaacgaagatgcaca
ggatgaggggaccccaccctggatgagggcagtgcaagataccaactgag
ctataaacacagctcaggtcaccagtgtagttcccaaggctgctttccaa
ggctactgatgagagtgttccatacattttatgttataatgcaaaaagat
ccccacttatatcctaagaactttgattttgccaccccatctctgtctgt
cattttcctcccagaagggagctgctttgccaacgttgtccccttgttct
cacaggagaagaggggttgctgggaccccgggcttgggagacccagagct
ttggctgaggctaattcaggggaaactaagagctataagaggaagacttt
ggagtccccttggtgactaaaagtcaaataaagggcttaagtatattgaa
atttctgtgggcttctgaactgtttctatcagacactgcccatggttcag
tgtttcaccagatatgctttgtgttaatgtatgcaagctaatctcaaatg
tgtccatgcatggatacttgccagtcattctctgtcccctagagtcagca
ttggctgctagttatcattcatctgttccaaccagttctagtaaacatc
gaattccacagaaaccttgaaatttacccactagcgctcagcatccctag
gagagtccctcctcagacccacacaaggctcagccctgcccacatcccct
ctcagcagcctttgtcagcacacctccaggagggctttccagtgtcgtgg
ctgtttcattacagcctctgggaaagatgaactgaagttagtgtctctgc
acatggcaaagggaaggtctgagggtcacattccacttacaacgataagc
ttctacctgccactgaatgtattaataataataacagcaacgacagtggc
agccttgacctaagggaggaaaaaaacatttcagaggagctaacttttcc
caagtctccgagattacaaaccataaggttggaataatgaagtcaatagg
ctttctgaaatacattctgtattttacagacaccgttctggtcagcccga
ctcatttagattcatgagtttccacagcggagatgatgacccaagaatat
attggttattttcctgctgctgtgataaaacacaatgagcacggtaactc
atagaggaaagtttatttgggcttacagttctagtgggctaggagaatcc
ataccattgaagaggggtgggggcgtctggggcagacagctggcttgcgg
ctggtctctcatctttaaccacaagcacaaaccttagagcgtgaactagg
aatgactgagagtttttaaactctcaaagcccccaccaaatggcatactt
tctccagcaaggccacacctcctaaacctatccaaacaccaccaacatct
ggggagcagatgcaaagagggacacattttactcagccacaaatgggttg
aatccacatctaaaaaaaaaaaaaaaaaaaggtcaaaatgatgtggatgt
aatcaaaaagcaaatctcacagagcgttctgagagcaagaagaagaaatg
tacccctttctagatcgagtctgagcacaggtgtggtactaattagaaga
aaaaacaattatttaaaaaatttatatggtgtgtgtgtcagatcctgaga
ggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_56456765_56457882
seq2: B6Ng01-055L06.b_51_1149 (reverse)

seq1  GATGTTTTACTAGAAACTTGTTGGGAAACAGATGGATGATAAACTAGCAA  50
      |||| |||||||| |||| |||||  |||||||| ||||| ||||||| |
seq2  GATG-TTTACTAG-AACTGGTTGG--AACAGATGAATGAT-AACTAGC-A  44

seq1  GCCAATGCCTGACCTCTAGGGGGACAGGAGAATTGACTGGGCAAGTATCC  100
      ||||||| |||| ||||| ||||||| ||||| ||||| |||||||||||
seq2  GCCAATG-CTGA-CTCTA-GGGGACA-GAGAA-TGACT-GGCAAGTATCC  88

seq1  ACGCATGGACACATTTGAGATTAGCTTGCCATACATTAACACAAAGCATT  150
      | |||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  ATGCATGGACACATTTGAGATTAGCTTG-CATACATTAACACAAAGCA-T  136

seq1  ATCTGGTGAAACACTGGACCATGGGCAGTGTCTGATTAGAAACAGTTCAG  200
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  ATCTGGTGAAACACTGAACCATGGGCAGTGTCTGA-TAGAAACAGTTCAG  185

seq1  AAGCCAACAGAAATTTCAATATAACTTAAGGCCTTTATTTGACTTTTTAG  250
      ||||| |||||||||||||||| ||||||| |||||||||||| ||||||
seq2  AAGCCCACAGAAATTTCAATAT-ACTTAAGCCCTTTATTTGAC-TTTTAG  233

seq1  TCACCAAGGGGACTCCAAAGTCTTCCTCCTTATAGCTCTTAGTTTCCCCC  300
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  TCACCAAGGGGACTCCAAAGTCTTCCT-CTTATAGCTCTTAGTTT-CCCC  281

seq1  TGAATTAGCCTCAGCCAAAGCTCTGGGTCTCCCAAGCCCGGGGTCCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGCCTCAGCCAAAGCTCTGGGTCTCCCAAGCCCGGGGTCCCAGC  331

seq1  AACCCCTCTTCTCCTGTGAGAACAAGGGGACAACGTTGGCAAAGCAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTCTTCTCCTGTGAGAACAAGGGGACAACGTTGGCAAAGCAGCTC  381

seq1  CCTTCTGGGAGGAAAATGACAGACAGAGATGGGGTGGCAAAATCAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGGAGGAAAATGACAGACAGAGATGGGGTGGCAAAATCAAAGTT  431

seq1  CTTAGGATATAAGTGGGGATCTTTTTGCATTATAACATAAAATGTATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGATATAAGTGGGGATCTTTTTGCATTATAACATAAAATGTATGGA  481

seq1  ACACTCTCATCAGTAGCCTTGGAAAGCAGCCTTGGGAACTACACTGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTCATCAGTAGCCTTGGAAAGCAGCCTTGGGAACTACACTGGTGA  531

seq1  CCTGAGCTGTGTTTATAGCTCAGTTGGTATCTTGCACTGCCCTCATCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCTGTGTTTATAGCTCAGTTGGTATCTTGCACTGCCCTCATCCAG  581

seq1  GGTGGGGTCCCCTCATCCTGTGCATCTTCGTTCAAGCTCTTGACTCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTCCCCTCATCCTGTGCATCTTCGTTCAAGCTCTTGACTCATCC  631

seq1  GTGTTTTGAAGTTGAAGAGGGATGCGGAGCCACTTTGTCCCAGTGACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGAAGTTGAAGAGGGATGCGGAGCCACTTTGTCCCAGTGACCAA  681

seq1  GCTTGGCTACTCAGCATCTTGGCTCTCTCCCATCAGCTCATCTGCTCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCTACTCAGCATCTTGGCTCTCTCCCATCAGCTCATCTGCTCATG  731

seq1  AAGCCAGAGGCAAGCCTGCTGTCTCCTCATACTCTCATGGGGTCTTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGAGGCAAGCCTGCTGTCTCCTCATACTCTCATGGGGTCTTAAAA  781

seq1  GGGCCTCTGAGGGAGCAGAAAGCACAACGCTGACTGTACTTTCTCGGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTGAGGGAGCAGAAAGCACAACGCTGACTGTACTTTCTCGGTTA  831

seq1  ACCCCTTCTGGAGTCCTTTCCTCTATGTGACATGCCTTTCAAGAAATAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCTGGAGTCCTTTCCTCTATGTGACATGCCTTTCAAGAAATAAC  881

seq1  TAGGAAATTGCCCTGAAGGTCAGTACTTTGTCCACCCTCTTGGGATGCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAATTGCCCTGAAGGTCAGTACTTTGTCCACCCTCTTGGGATGCTA  931

seq1  GTGAAATGATGGACAGGCAGTTGATGGACAGGTGAGAAGGTGGACATGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGATGGACAGGCAGTTGATGGACAGGTGAGAAGGTGGACATGTA  981

seq1  ACCACCACATCTGTGGATCAGAGATGTGGAAAATCCTAGTGATGCATCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACATCTGTGGATCAGAGATGTGGAAAATCCTAGTGATGCATCAG  1031

seq1  CTACAAAAGGAAGAGGTGCTGCCAGACCCTAAAATACCCTAAGCTTTCCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAAGGAAGAGGTGCTGCCAGACCCTAAAATACCCTAAGCTTTCCT  1081

seq1  TGTCAGCAAAGGGAATTC  1118
      ||||||||||||||||||
seq2  TGTCAGCAAAGGGAATTC  1099

seq1: chr7_56311956_56313029
seq2: B6Ng01-055L06.g_69_1123

seq1  GAATTCCACAGAAACCTTGAAATTTACCCACTAGCGCTCAGCATCCCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGAAACCTTGAAATTTACCCACTAGCGCTCAGCATCCCTAG  50

seq1  GAGAGTCCCTCCTCAGACCCACACAAGGCTCAGCCCTGCCCACATCCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCCCTCCTCAGACCCACACAAGGCTCAGCCCTGCCCACATCCCCT  100

seq1  CTCAGCAGCCTTTGTCAGCACACCTCCAGGAGGGCTTTCCAGTGTCGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGCCTTTGTCAGCACACCTCCAGGAGGGCTTTCCAGTGTCGTGG  150

seq1  CTGTTTCATTACAGCCTCTGGGAAAGATGAACTGAAGTTAGTGTCTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCATTACAGCCTCTGGGAAAGATGAACTGAAGTTAGTGTCTCTGC  200

seq1  ACATGGCAAAGGGAAGGTCTGAGGGTCACATTCCACTTACAACGATAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCAAAGGGAAGGTCTGAGGGTCACATTCCACTTACAACGATAAGC  250

seq1  TTCTACCTGCCACTGAATGTATTAATAATAATAACAGCAACGACAGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTGCCACTGAATGTATTAATAATAATAACAGCAACGACAGTGGC  300

seq1  AGCCTTGACCTAAGGGAGGAAAAAAACATTTCAGAGGAGCTAACTTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGACCTAAGGGAGGAAAAAAACATTTCAGAGGAGCTAACTTTTCC  350

seq1  CAAGTCTCCGAGATTACAAACCATAAGGTTGGAATAATGAAGTCAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTCCGAGATTACAAACCATAAGGTTGGAATAATGAAGTCAATAGG  400

seq1  CTTTCTGAAATACATTCTGTATTTTACAGACACCGTTCTGGTCAGCCCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAATACATTCTGTATTTTACAGACACCGTTCTGGTCAGCCCGA  450

seq1  CTCATTTAGATTCATGAGTTTCCACAGCGGAGATGATGACCCAAGAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTAGATTCATGAGTTTCCACAGCGGAGATGATGACCCAAGAATAT  500

seq1  ATTGGTTATTTTCCTGCTGCTGTGATAAAACACAATGAGCACGGTAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTATTTTCCTGCTGCTGTGATAAAACACAATGAGCACGGTAACTC  550

seq1  ATAGAGGAAAGTTTATTTGGGCTTACAGTTCTAGTGGGCTAGGAGAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGAAAGTTTATTTGGGCTTACAGTTCTAGTGGGCTAGGAGAATCC  600

seq1  ATACCATTGAAGAGGGGTGGGGGCGTCTGGGGCAGACAGCTGGCTTGCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATTGAAGAGGGGTGGGGGCGTCTGGGGCAGACAGCTGGCTTGCGG  650

seq1  CTGGTCTCTCATCTTTAACCACAAGCACAAACCTTAGAGCGTGAACTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCTCATCTTTAACCACAAGCACAAACCTTAGAGCGTGAACTAGG  700

seq1  AATGACTGAGAGTTTTTAAACTCTCAAAGCCCCCACCAAATGGCATACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGAGAGTTTTTAAACTCTCAAAGCCCCCACCAAATGGCATACTT  750

seq1  TCTCCAGCAAGGCCACACCTCCTAAACCTATCCAAACACCACCAACATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCAAGGCCACACCTCCTAAACCTATCCAAACACCACCAACATCT  800

seq1  GGGGAGCAGGATGCAAAGAGGGACACATTTAACTCAGCCACAAATGGGTT  850
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  GGGGAGCA-GATGCAAAGAGGGACACATTTTACTCAGCCACAAATGGGTT  849

seq1  GAATCCAACATCTAAAAAAAAAAAAAAAAAAAAGGTCAAAATGATGTGGG  900
      |||||| |||||| ||||||||||||||||||||||||||||||||| ||
seq2  GAATCC-ACATCT-AAAAAAAAAAAAAAAAAAAGGTCAAAATGATGT-GG  896

seq1  ATGTAATCAAAAAGCAAATCTCACAGAGCGTTCTGAGAAGCAAGAAGAAG  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGTAATCAAAAAGCAAATCTCACAGAGCGTTCTGAG-AGCAAGAAGAAG  945

seq1  AAATGGTACCCCTTCCTAGGACCCGAGTCTGAGCACAGGTGTGAGTACTA  1000
      |||| ||||||||| ||||    |||||||||||||||||||| ||||||
seq2  AAAT-GTACCCCTTTCTAG--ATCGAGTCTGAGCACAGGTGTG-GTACTA  991

seq1  ATTAGAGAGAAAAAAAACAATTAATTTAAAAAATTATATATGGGTGTGTG  1050
      ||||||   | ||||||||||| |||||||||||| ||||||   |||||
seq2  ATTAGA---AGAAAAAACAATT-ATTTAAAAAATT-TATATG---GTGTG  1033

seq1  TGTGCAAGATCCCTGAGGAGGTCA  1074
      ||||  |||| ||||| |||||||
seq2  TGTGTCAGAT-CCTGA-GAGGTCA  1055